More than 300 homologs were found in PanDaTox collection
for query gene Noc_2527 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008786  Veis_1496  ribonucleotide-diphosphate reductase subunit alpha  66.19 
 
 
968 aa  761    Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2639  ribonucleotide-diphosphate reductase subunit alpha  67.75 
 
 
974 aa  795    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.618386  n/a   
 
 
-
 
NC_013422  Hneap_1010  ribonucleotide-diphosphate reductase subunit alpha  72.07 
 
 
957 aa  827    Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_002620  TC0214  ribonucleotide-diphosphate reductase subunit alpha  58.35 
 
 
1047 aa  659    Chlamydia muridarum Nigg  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0564  ribonucleotide-diphosphate reductase subunit alpha  70.02 
 
 
1001 aa  756    Burkholderia cenocepacia MC0-3  Bacteria  normal  hitchhiker  0.00066464 
 
 
-
 
NC_013093  Amir_3157  ribonucleoside-diphosphate reductase, alpha subunit  65.59 
 
 
950 aa  749    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2575  ribonucleoside-diphosphate reductase, alpha subunit  58.67 
 
 
806 aa  658    Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.110528  n/a   
 
 
-
 
NC_002947  PP_1179  ribonucleotide-diphosphate reductase subunit alpha  68.99 
 
 
959 aa  787    Pseudomonas putida KT2440  Bacteria  normal  0.492267  normal  0.0911019 
 
 
-
 
NC_013159  Svir_16410  ribonucleotide-diphosphate reductase subunit alpha  68.82 
 
 
815 aa  765    Saccharomonospora viridis DSM 43017  Bacteria  normal  0.795601  normal  0.531671 
 
 
-
 
NC_010531  Pnec_0222  ribonucleotide-diphosphate reductase subunit alpha  66.61 
 
 
990 aa  774    Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  hitchhiker  0.000088492  normal  0.91407 
 
 
-
 
NC_002977  MCA1634  ribonucleotide-diphosphate reductase subunit alpha  74.19 
 
 
969 aa  850    Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2805  ribonucleotide-diphosphate reductase subunit alpha  72.5 
 
 
987 aa  785    Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.214099 
 
 
-
 
NC_009727  CBUD_0436  ribonucleotide-diphosphate reductase subunit alpha  74.04 
 
 
941 aa  823    Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4610  ribonucleoside-diphosphate reductase, alpha subunit  65.79 
 
 
882 aa  757    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.68692 
 
 
-
 
NC_008825  Mpe_A3214  ribonucleotide-diphosphate reductase subunit alpha  67.26 
 
 
971 aa  770    Methylibium petroleiphilum PM1  Bacteria  normal  0.472198  normal  0.0671441 
 
 
-
 
NC_004578  PSPTO_1671  ribonucleoside-diphosphate reductase, alpha subunit  68.04 
 
 
970 aa  773    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2510  ribonucleotide-diphosphate reductase subunit alpha  70.02 
 
 
995 aa  756    Burkholderia mallei ATCC 23344  Bacteria  normal  0.121944  n/a   
 
 
-
 
NC_006368  lpp1738  ribonucleotide-diphosphate reductase subunit alpha  74.23 
 
 
942 aa  835    Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1738  ribonucleotide-diphosphate reductase subunit alpha  74.42 
 
 
942 aa  836    Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007005  Psyr_3717  ribonucleotide-diphosphate reductase subunit alpha  67.86 
 
 
970 aa  773    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0503924 
 
 
-
 
NC_009512  Pput_1210  ribonucleotide-diphosphate reductase subunit alpha  68.99 
 
 
959 aa  787    Pseudomonas putida F1  Bacteria  normal  0.281558  normal  0.710482 
 
 
-
 
NC_007333  Tfu_3001  ribonucleoside-diphosphate reductase  65.78 
 
 
821 aa  775    Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2941  ribonucleotide-diphosphate reductase subunit alpha  67.74 
 
 
979 aa  778    Ralstonia eutropha JMP134  Bacteria  normal  0.0976266  n/a   
 
 
-
 
NC_013889  TK90_1442  ribonucleoside-diphosphate reductase, alpha subunit  77.96 
 
 
964 aa  892    Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_3385  ribonucleotide-diphosphate reductase subunit alpha  67.44 
 
 
967 aa  778    Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1976  ribonucleotide-diphosphate reductase subunit alpha  67.09 
 
 
974 aa  768    Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_2888  ribonucleotide-diphosphate reductase subunit alpha  68.8 
 
 
969 aa  801    Nitrobacter winogradskyi Nb-255  Bacteria  normal  decreased coverage  0.00821454 
 
 
-
 
NC_007434  BURPS1710b_3511  ribonucleotide-diphosphate reductase subunit alpha  70.02 
 
 
995 aa  756    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2527  ribonucleoside-diphosphate reductase  100 
 
 
1336 aa  2789    Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4246  ribonucleotide-diphosphate reductase subunit alpha  68.91 
 
 
964 aa  778    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0250585  normal  0.994007 
 
 
-
 
NC_010117  COXBURSA331_A1736  ribonucleotide-diphosphate reductase subunit alpha  74.04 
 
 
941 aa  823    Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3679  ribonucleotide-diphosphate reductase subunit alpha  70.21 
 
 
998 aa  756    Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4224  ribonucleotide-diphosphate reductase subunit alpha  70.13 
 
 
963 aa  790    Pseudomonas aeruginosa PA7  Bacteria  normal  0.194007  n/a   
 
 
-
 
NC_011992  Dtpsy_2942  ribonucleotide-diphosphate reductase subunit alpha  66.55 
 
 
974 aa  777    Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3047  ribonucleotide-diphosphate reductase subunit alpha  72.5 
 
 
994 aa  786    Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2621  ribonucleoside-diphosphate reductase, alpha subunit  61.9 
 
 
819 aa  689    Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.136472  n/a   
 
 
-
 
NC_007614  Nmul_A2468  ribonucleotide-diphosphate reductase subunit alpha  67.22 
 
 
956 aa  771    Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.0692505  n/a   
 
 
-
 
NC_009439  Pmen_3151  ribonucleotide-diphosphate reductase subunit alpha  68.77 
 
 
968 aa  773    Pseudomonas mendocina ymp  Bacteria  normal  normal  0.474699 
 
 
-
 
NC_007651  BTH_I1153  ribonucleotide-diphosphate reductase subunit alpha  69.83 
 
 
995 aa  755    Burkholderia thailandensis E264  Bacteria  normal  0.840642  n/a   
 
 
-
 
NC_011901  Tgr7_2615  ribonucleotide-diphosphate reductase subunit alpha  80 
 
 
971 aa  917    Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.104389  n/a   
 
 
-
 
NC_012791  Vapar_0956  ribonucleotide-diphosphate reductase subunit alpha  67.03 
 
 
971 aa  777    Variovorax paradoxus S110  Bacteria  normal  0.328606  n/a   
 
 
-
 
NC_007908  Rfer_3347  ribonucleotide-diphosphate reductase subunit alpha  65.26 
 
 
981 aa  765    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2458  ribonucleotide-diphosphate reductase subunit alpha  70.55 
 
 
969 aa  789    Saccharophagus degradans 2-40  Bacteria  normal  0.0127946  normal 
 
 
-
 
NC_007925  RPC_3519  ribonucleotide-diphosphate reductase subunit alpha  69.65 
 
 
960 aa  801    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0732162 
 
 
-
 
NC_010501  PputW619_1192  ribonucleotide-diphosphate reductase subunit alpha  68.81 
 
 
959 aa  781    Pseudomonas putida W619  Bacteria  normal  0.159136  normal  0.293014 
 
 
-
 
NC_007948  Bpro_1107  ribonucleotide-diphosphate reductase subunit alpha  65.65 
 
 
969 aa  774    Polaromonas sp. JS666  Bacteria  decreased coverage  0.000104617  normal 
 
 
-
 
NC_007951  Bxe_A0521  ribonucleotide-diphosphate reductase subunit alpha  70.31 
 
 
1001 aa  758    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_3474  ribonucleotide-diphosphate reductase subunit alpha  70.02 
 
 
995 aa  756    Burkholderia pseudomallei 668  Bacteria  normal  0.469348  n/a   
 
 
-
 
NC_007963  Csal_0668  ribonucleotide-diphosphate reductase subunit alpha  72.32 
 
 
976 aa  772    Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.142133  n/a   
 
 
-
 
NC_007964  Nham_3663  ribonucleotide-diphosphate reductase subunit alpha  68.43 
 
 
966 aa  798    Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0522  ribonucleotide-diphosphate reductase subunit alpha  70.21 
 
 
999 aa  757    Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.114808 
 
 
-
 
NC_007973  Rmet_3088  ribonucleotide-diphosphate reductase subunit alpha  68.27 
 
 
979 aa  780    Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4236  ribonucleotide-diphosphate reductase subunit alpha  69.17 
 
 
959 aa  788    Pseudomonas putida GB-1  Bacteria  normal  0.938732  normal 
 
 
-
 
NC_008782  Ajs_3632  ribonucleotide-diphosphate reductase subunit alpha  66.79 
 
 
972 aa  778    Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_2264  ribonucleoside-diphosphate reductase, alpha subunit  68.23 
 
 
948 aa  746    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  decreased coverage  0.00000000198665 
 
 
-
 
NC_008060  Bcen_0112  ribonucleotide-diphosphate reductase subunit alpha  70.02 
 
 
1001 aa  756    Burkholderia cenocepacia AU 1054  Bacteria  normal  0.290006  n/a   
 
 
-
 
NC_008752  Aave_0864  ribonucleotide-diphosphate reductase subunit alpha  65.67 
 
 
983 aa  765    Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0575744 
 
 
-
 
NC_008836  BMA10229_A1290  ribonucleotide-diphosphate reductase subunit alpha  70.02 
 
 
995 aa  756    Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_012855  Rpic12D_4673  ribonucleoside-diphosphate reductase, alpha subunit  64.86 
 
 
949 aa  737    Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2703  ribonucleotide-diphosphate reductase subunit alpha  72.64 
 
 
954 aa  819    Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2637  ribonucleotide-diphosphate reductase subunit alpha  72.69 
 
 
994 aa  788    Ralstonia pickettii 12D  Bacteria  normal  0.261091  normal 
 
 
-
 
NC_012560  Avin_33290  ribonucleoside-diphosphate reductase, alpha subunit precursor  67.7 
 
 
1338 aa  1872    Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0382  ribonucleotide-diphosphate reductase subunit alpha  68.85 
 
 
958 aa  789    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0345266 
 
 
-
 
NC_010002  Daci_1501  ribonucleotide-diphosphate reductase subunit alpha  66.55 
 
 
973 aa  771    Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2102  ribonucleoside-diphosphate reductase, alpha subunit  70 
 
 
928 aa  781    Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.503892  normal  0.151271 
 
 
-
 
NC_013501  Rmar_0431  ribonucleoside-diphosphate reductase, alpha subunit  65.44 
 
 
926 aa  722    Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2639  ribonucleotide-diphosphate reductase subunit alpha  70.38 
 
 
997 aa  762    Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0497  ribonucleotide-diphosphate reductase subunit alpha  70.21 
 
 
999 aa  756    Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_49460  ribonucleotide-diphosphate reductase subunit alpha  70.13 
 
 
963 aa  790    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00878086  normal  0.899958 
 
 
-
 
NC_009379  Pnuc_0204  ribonucleotide-diphosphate reductase subunit alpha  65.65 
 
 
993 aa  771    Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  hitchhiker  0.000988288  n/a   
 
 
-
 
NC_008542  Bcen2424_0594  ribonucleotide-diphosphate reductase subunit alpha  70.02 
 
 
1001 aa  756    Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_2789  ribonucleotide-diphosphate reductase subunit alpha  70.79 
 
 
995 aa  762    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_3512  ribonucleotide-diphosphate reductase subunit alpha  70.02 
 
 
995 aa  756    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3436  ribonucleotide-diphosphate reductase subunit alpha  70.21 
 
 
1001 aa  762    Burkholderia phytofirmans PsJN  Bacteria  normal  0.124151  hitchhiker  0.00141337 
 
 
-
 
NC_011761  AFE_2638  ribonucleotide-diphosphate reductase, alpha subunit  68.23 
 
 
948 aa  746    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3273  ribonucleotide-diphosphate reductase subunit alpha  70.02 
 
 
995 aa  756    Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0431  ribonucleotide-diphosphate reductase subunit alpha  70.02 
 
 
995 aa  756    Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3857  ribonucleotide-diphosphate reductase subunit alpha  68.77 
 
 
949 aa  769    Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_2657  ribonucleoside-diphosphate reductase, alpha subunit  52.83 
 
 
836 aa  609  9.999999999999999e-173  Natrialba magadii ATCC 43099  Archaea  normal  0.0654919  n/a   
 
 
-
 
NC_013739  Cwoe_1716  ribonucleoside-diphosphate reductase, alpha subunit  55.09 
 
 
1091 aa  605  1.0000000000000001e-171  Conexibacter woesei DSM 14684  Bacteria  normal  0.751506  normal  0.0180943 
 
 
-
 
NC_013158  Huta_2338  ribonucleoside-diphosphate reductase, alpha subunit  51.09 
 
 
815 aa  583  1.0000000000000001e-165  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_011071  Smal_0206  ribonucleoside-diphosphate reductase, alpha subunit  45.14 
 
 
803 aa  451  1e-125  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.959297 
 
 
-
 
NC_008578  Acel_1724  ribonucleoside-diphosphate reductase, alpha subunit  43.59 
 
 
781 aa  443  9.999999999999999e-123  Acidothermus cellulolyticus 11B  Bacteria  normal  0.784407  normal 
 
 
-
 
NC_009380  Strop_4388  ribonucleoside-diphosphate reductase, alpha subunit  43.36 
 
 
909 aa  424  1e-117  Salinispora tropica CNB-440  Bacteria  normal  0.370714  normal  0.249939 
 
 
-
 
NC_013595  Sros_6269  Ribonucleoside-diphosphate reductase  44.08 
 
 
731 aa  420  1e-116  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0588825 
 
 
-
 
NC_009953  Sare_4877  ribonucleoside-diphosphate reductase, alpha subunit  42.33 
 
 
821 aa  419  9.999999999999999e-116  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.150541 
 
 
-
 
NC_013131  Caci_2042  ribonucleoside-diphosphate reductase, alpha subunit  41.34 
 
 
841 aa  408  1.0000000000000001e-112  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.930339  hitchhiker  0.00801348 
 
 
-
 
NC_013947  Snas_5566  ribonucleoside-diphosphate reductase subunit alpha  43.92 
 
 
771 aa  402  9.999999999999999e-111  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.704999  normal 
 
 
-
 
NC_013169  Ksed_21940  ribonucleoside-diphosphate reductase, alpha subunit  40.03 
 
 
875 aa  399  1e-109  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.390444  normal  0.836113 
 
 
-
 
NC_009441  Fjoh_0521  ribonucleoside-diphosphate reductase, alpha subunit  38.84 
 
 
797 aa  393  1e-107  Flavobacterium johnsoniae UW101  Bacteria  normal  0.359224  n/a   
 
 
-
 
NC_008255  CHU_0451  ribonucleoside diphosphate reductase, alpha subunit  39.21 
 
 
794 aa  390  1e-106  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
BN001303  ANIA_04380  ribonucleoside-diphosphate reductase large chain (Eurofung)  41.53 
 
 
865 aa  383  1e-104  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_013061  Phep_0691  ribonucleoside-diphosphate reductase, alpha subunit  39.21 
 
 
792 aa  382  1e-104  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0197875  normal 
 
 
-
 
NC_013132  Cpin_1974  ribonucleoside-diphosphate reductase, alpha subunit  39.78 
 
 
802 aa  377  1e-103  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.150838 
 
 
-
 
NC_010830  Aasi_0536  hypothetical protein  40.19 
 
 
790 aa  378  1e-103  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
-
 
NC_013730  Slin_6359  ribonucleoside-diphosphate reductase, alpha subunit  37.64 
 
 
826 aa  374  1e-102  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_3267  ribonucleoside-diphosphate reductase, alpha subunit  39.89 
 
 
814 aa  375  1e-102  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_02080  probable ribonucleoside-diphosphate reductase large chain  37.16 
 
 
840 aa  374  1e-102  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_011669  PHATRDRAFT_42726  predicted protein  39.56 
 
 
814 aa  359  1.9999999999999998e-97  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_009042  PICST_75662  Ribonucleoside-diphosphate reductase large chain 1  38.81 
 
 
861 aa  359  1.9999999999999998e-97  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.864238  normal 
 
 
-
 
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