7 homologs were found in PanDaTox collection
for query gene Noc_0054 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007484  Noc_0054  hypothetical protein  100 
 
 
215 aa  436  1e-121  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0442309  n/a   
 
 
-
 
NC_007760  Adeh_1801  terminase small subunit  33.81 
 
 
232 aa  65.5  0.0000000006  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.21982  n/a   
 
 
-
 
NC_009636  Smed_1897  phage terminase small subunit  38.03 
 
 
166 aa  62.4  0.000000005  Sinorhizobium medicae WSM419  Bacteria  normal  0.94063  normal 
 
 
-
 
NC_010002  Daci_4100  terminase small subunit  32.02 
 
 
210 aa  55.8  0.0000005  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00000000879994 
 
 
-
 
NC_011757  Mchl_1604  Terminase small subunit  27.14 
 
 
193 aa  48.9  0.00006  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1829  terminase small subunit  33.13 
 
 
187 aa  47.8  0.0001  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00926701 
 
 
-
 
NC_008751  Dvul_0627  hypothetical protein  33.06 
 
 
211 aa  42.4  0.006  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
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