More than 300 homologs were found in PanDaTox collection
for query gene Ndas_3601 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  100 
 
 		 222 aa  427  1e-119  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal  1 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  78.18 
 
 		 221 aa  310  1e-83  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  71.82 
 
 		 224 aa  305  3e-82  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal  1 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  69.09 
 
 		 222 aa  288  3e-77  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  67.73 
 
 		 215 aa  283  1.0000000000000001e-75  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  65.32 
 
 		 225 aa  281  5.000000000000001e-75  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.137578 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  66.36 
 
 		 221 aa  278  4e-74  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal  1 
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  68.02 
 
 		 224 aa  270  1e-71  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal  1 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  66.82 
 
 		 219 aa  269  2.9999999999999997e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  64.57 
 
 		 221 aa  268  5.9999999999999995e-71  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal  1 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  64.25 
 
 		 221 aa  260  1e-68  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  65.58 
 
 		 217 aa  259  3e-68  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  62.21 
 
 		 226 aa  258  4e-68  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  62.82 
 
 		 244 aa  258  7e-68  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal  1 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  62.5 
 
 		 223 aa  257  1e-67  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal  1 
 
 
-
 
NC_013947  Snas_0645  two component transcriptional regulator, LuxR family  62.9 
 
 		 220 aa  256  1e-67  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.691779  normal  1 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  64.22 
 
 		 226 aa  256  2e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0924411 
 
 
-
 
NC_007777  Francci3_0303  two component LuxR family transcriptional regulator  65.28 
 
 		 214 aa  251  4.0000000000000004e-66  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  61.11 
 
 		 247 aa  251  7e-66  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal  1 
 
 
-
 
NC_009921  Franean1_6511  two component LuxR family transcriptional regulator  64.65 
 
 		 215 aa  251  9.000000000000001e-66  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.100644 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  63.51 
 
 		 232 aa  248  4e-65  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  61.54 
 
 		 230 aa  247  9e-65  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  58.56 
 
 		 233 aa  246  2e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  63.59 
 
 		 217 aa  246  3e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  62.1 
 
 		 218 aa  244  9e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  61.47 
 
 		 226 aa  243  9.999999999999999e-64  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal  1 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  61.43 
 
 		 223 aa  242  3e-63  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  60.63 
 
 		 220 aa  241  6e-63  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  60.73 
 
 		 226 aa  240  1e-62  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.554715 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  58.11 
 
 		 224 aa  240  1e-62  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  60.55 
 
 		 220 aa  239  2e-62  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  60.93 
 
 		 222 aa  239  2e-62  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.811978 
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  59.55 
 
 		 224 aa  238  5.999999999999999e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  60.27 
 
 		 226 aa  236  2e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  59.73 
 
 		 236 aa  236  2e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  59.91 
 
 		 222 aa  236  2e-61  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  58.11 
 
 		 227 aa  235  4e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  61.11 
 
 		 221 aa  233  1.0000000000000001e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal  1 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  58.48 
 
 		 225 aa  233  2.0000000000000002e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  58.88 
 
 		 224 aa  232  4.0000000000000004e-60  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal  1 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  57.85 
 
 		 241 aa  231  8.000000000000001e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  55.36 
 
 		 228 aa  230  1e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  58.82 
 
 		 224 aa  229  3e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  55.41 
 
 		 221 aa  229  4e-59  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  57.92 
 
 		 226 aa  229  4e-59  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  60.65 
 
 		 302 aa  228  7e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  58.3 
 
 		 225 aa  227  1e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  58.9 
 
 		 215 aa  227  1e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.16 
 
 		 229 aa  227  1e-58  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.84 
 
 		 261 aa  226  2e-58  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  55.76 
 
 		 225 aa  226  3e-58  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  60.83 
 
 		 218 aa  226  3e-58  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  57.78 
 
 		 222 aa  225  4e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  55.91 
 
 		 231 aa  224  6e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  57.08 
 
 		 220 aa  224  8e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  59.28 
 
 		 225 aa  224  8e-58  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal  1 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  55.66 
 
 		 221 aa  224  8e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  55.2 
 
 		 221 aa  224  9e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal  1 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  55.61 
 
 		 223 aa  223  2e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.172592 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  57.21 
 
 		 217 aa  221  4.9999999999999996e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  54.71 
 
 		 226 aa  221  6e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  55.41 
 
 		 225 aa  221  6e-57  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  58.04 
 
 		 227 aa  221  7e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  54.11 
 
 		 229 aa  220  9.999999999999999e-57  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  57.34 
 
 		 225 aa  219  1.9999999999999999e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  56.02 
 
 		 230 aa  219  1.9999999999999999e-56  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  56.02 
 
 		 239 aa  219  3e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  57.34 
 
 		 220 aa  219  3.9999999999999997e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  55.96 
 
 		 239 aa  219  3.9999999999999997e-56  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  56.56 
 
 		 228 aa  218  5e-56  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  53.22 
 
 		 231 aa  218  7.999999999999999e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.176081 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  56.74 
 
 		 214 aa  217  1e-55  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  57.34 
 
 		 230 aa  216  2e-55  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  53.71 
 
 		 234 aa  216  2.9999999999999998e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal  1 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  57.34 
 
 		 225 aa  216  2.9999999999999998e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  53.21 
 
 		 218 aa  214  5.9999999999999996e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  54.26 
 
 		 223 aa  214  9e-55  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_013947  Snas_1509  two component transcriptional regulator, LuxR family  54.09 
 
 		 221 aa  214  9.999999999999999e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.198395  normal  0.0597777 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  56.28 
 
 		 225 aa  214  9.999999999999999e-55  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  55.3 
 
 		 225 aa  214  9.999999999999999e-55  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  57.4 
 
 		 230 aa  213  1.9999999999999998e-54  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0025253 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  55.96 
 
 		 218 aa  213  1.9999999999999998e-54  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  55.25 
 
 		 217 aa  213  1.9999999999999998e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  54.42 
 
 		 211 aa  213  2.9999999999999995e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  53.7 
 
 		 234 aa  212  2.9999999999999995e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  56.74 
 
 		 241 aa  212  2.9999999999999995e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  54.09 
 
 		 219 aa  212  4.9999999999999996e-54  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  53.92 
 
 		 215 aa  211  5.999999999999999e-54  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  55.5 
 
 		 216 aa  211  7.999999999999999e-54  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  56.16 
 
 		 224 aa  211  9e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  54.19 
 
 		 228 aa  210  1e-53  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  57.99 
 
 		 217 aa  210  1e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.79 
 
 		 236 aa  209  2e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  55.56 
 
 		 214 aa  209  3e-53  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal  1 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  54.55 
 
 		 218 aa  209  4e-53  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  53.46 
 
 		 220 aa  209  4e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.495874 
 
 
-
 
NC_013510  Tcur_2233  two component transcriptional regulator, LuxR family  54.5 
 
 		 232 aa  208  5e-53  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00197033  n/a   
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  42.69 
 
 		 261 aa  208  6e-53  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  56.36 
 
 		 227 aa  207  8e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  51.61 
 
 		 219 aa  207  9e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
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