More than 300 homologs were found in PanDaTox collection
for query gene Ndas_2087 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  100 
 
 
247 aa  474  1e-133  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  74.78 
 
 
226 aa  311  5e-84  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  66.51 
 
 
228 aa  278  8e-74  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  69.44 
 
 
302 aa  257  1e-67  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_014210  Ndas_3601  two component transcriptional regulator, LuxR family  61.11 
 
 
222 aa  251  8e-66  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.324048  normal 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  60 
 
 
225 aa  247  1e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  59.65 
 
 
224 aa  245  4e-64  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  58.37 
 
 
241 aa  243  1e-63  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  60.52 
 
 
229 aa  243  2e-63  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  58.74 
 
 
221 aa  241  6e-63  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013521  Sked_36930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  59.53 
 
 
222 aa  241  9e-63  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.811978 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  58.72 
 
 
222 aa  239  2e-62  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  59.74 
 
 
231 aa  240  2e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  58.02 
 
 
244 aa  238  7e-62  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_007333  Tfu_0767  LuxR response regulator receiver  59.91 
 
 
221 aa  235  4e-61  Thermobifida fusca YX  Bacteria  normal  0.88397  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  61.82 
 
 
218 aa  235  4e-61  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  60.73 
 
 
220 aa  235  5e-61  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  56.31 
 
 
215 aa  234  1e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  56.48 
 
 
221 aa  234  1e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  59.11 
 
 
226 aa  234  1e-60  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  58.41 
 
 
224 aa  234  1e-60  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013093  Amir_4511  two component transcriptional regulator, LuxR family  59.29 
 
 
226 aa  233  1e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  0.11054  n/a   
 
 
-
 
NC_013131  Caci_3748  two component transcriptional regulator, LuxR family  58.56 
 
 
236 aa  233  3e-60  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  58.99 
 
 
226 aa  232  3e-60  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009921  Franean1_4684  two component LuxR family transcriptional regulator  57.41 
 
 
223 aa  232  5e-60  Frankia sp. EAN1pec  Bacteria  normal  0.51425  normal 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  56.44 
 
 
223 aa  232  5e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  58.45 
 
 
221 aa  231  6e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  56.82 
 
 
221 aa  230  1e-59  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  60.09 
 
 
215 aa  229  2e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  57.96 
 
 
227 aa  229  2e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  56.95 
 
 
226 aa  230  2e-59  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  56.25 
 
 
231 aa  229  4e-59  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  59.82 
 
 
220 aa  228  6e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  61.86 
 
 
225 aa  228  7e-59  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  56.33 
 
 
228 aa  226  3e-58  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  54.74 
 
 
234 aa  225  4e-58  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_009921  Franean1_3390  two component LuxR family transcriptional regulator  54.95 
 
 
226 aa  224  8e-58  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_013947  Snas_5265  two component transcriptional regulator, LuxR family  56.48 
 
 
218 aa  224  1e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  56.94 
 
 
217 aa  224  1e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  7.94288e-08  unclonable  3.32591e-08 
 
 
-
 
NC_013757  Gobs_2015  two component transcriptional regulator, LuxR family  55.84 
 
 
232 aa  224  1e-57  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.706703  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  55.8 
 
 
218 aa  224  1e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  56.5 
 
 
225 aa  223  2e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_6049  two component transcriptional regulator, LuxR family  60.71 
 
 
224 aa  222  3e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.764436  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  54.08 
 
 
234 aa  222  4e-57  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  56.44 
 
 
225 aa  222  5e-57  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  59.07 
 
 
225 aa  222  5e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  52.59 
 
 
239 aa  221  6e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  56.52 
 
 
227 aa  221  9e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  56.36 
 
 
230 aa  221  1e-56  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0609  response regulator receiver protein  53.7 
 
 
218 aa  220  2e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  60.47 
 
 
221 aa  220  2e-56  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  53.88 
 
 
261 aa  219  2e-56  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  58.72 
 
 
225 aa  219  3e-56  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  55.4 
 
 
224 aa  219  3e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  56.28 
 
 
218 aa  219  4e-56  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  55.81 
 
 
221 aa  219  4e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_013595  Sros_4508  response regulator receiver protein  53.81 
 
 
219 aa  218  5e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.401356  normal  0.568133 
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  59.62 
 
 
217 aa  218  6e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  54.05 
 
 
220 aa  218  6e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  54.59 
 
 
223 aa  218  7e-56  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  3.86408e-05  hitchhiker  0.000570848 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  55.36 
 
 
225 aa  217  1e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  55.41 
 
 
225 aa  215  4e-55  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  58.22 
 
 
224 aa  215  4e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  54.79 
 
 
219 aa  215  4e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  55.45 
 
 
224 aa  216  4e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  56.54 
 
 
226 aa  215  5e-55  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013947  Snas_3287  two component transcriptional regulator, LuxR family  52.97 
 
 
233 aa  214  8e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0842926  normal  0.330639 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  56.94 
 
 
220 aa  214  8e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  53.7 
 
 
224 aa  214  1e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  55.11 
 
 
226 aa  213  2e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  54.59 
 
 
225 aa  213  2e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013510  Tcur_1300  two component transcriptional regulator, LuxR family  52.11 
 
 
215 aa  213  2e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  0.145336  n/a   
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  55.86 
 
 
222 aa  212  3e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  53.25 
 
 
230 aa  213  3e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.15 
 
 
229 aa  212  4e-54  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013131  Caci_7160  two component transcriptional regulator, LuxR family  55.3 
 
 
224 aa  212  4e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  55.4 
 
 
241 aa  212  5e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013595  Sros_8243  response regulator receiver protein  57.66 
 
 
217 aa  212  5e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.931194  normal  0.230681 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  53.92 
 
 
249 aa  212  5e-54  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_013131  Caci_6094  two component transcriptional regulator, LuxR family  55.22 
 
 
235 aa  212  5e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.634688  normal  0.121163 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  53.74 
 
 
225 aa  211  6e-54  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  54.19 
 
 
222 aa  211  8e-54  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  55.14 
 
 
217 aa  211  1e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  53.81 
 
 
223 aa  210  2e-53  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  53.7 
 
 
220 aa  210  2e-53  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  54.11 
 
 
234 aa  210  2e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_009921  Franean1_3727  two component LuxR family transcriptional regulator  52.07 
 
 
226 aa  209  2e-53  Frankia sp. EAN1pec  Bacteria  normal  normal  0.554715 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.84 
 
 
244 aa  210  2e-53  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  54.21 
 
 
219 aa  209  3e-53  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  54.59 
 
 
221 aa  209  3e-53  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  54.21 
 
 
220 aa  209  3e-53  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  52.78 
 
 
239 aa  209  4e-53  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  55.4 
 
 
211 aa  209  5e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  55.22 
 
 
230 aa  208  6e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  55.81 
 
 
214 aa  208  7e-53  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  53.49 
 
 
225 aa  208  7e-53  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_010816  BLD_0671  putative response regulator  48.13 
 
 
248 aa  207  9e-53  Bifidobacterium longum DJO10A  Bacteria  normal  0.248332  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  52.68 
 
 
228 aa  207  1e-52  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.98 
 
 
236 aa  207  1e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  55.45 
 
 
223 aa  207  1e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
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