More than 300 homologs were found in PanDaTox collection
for query gene Ndas_1389 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014210  Ndas_1389  putative two component transcriptional regulator, winged helix family  100 
 
 		 171 aa  330  7.000000000000001e-90  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.287988  hitchhiker  0.00961108 
 
 
-
 
NC_007333  Tfu_1501  response regulator  40.74 
 
 		 206 aa  101  4e-21  Thermobifida fusca YX  Bacteria  normal  0.117784  n/a   
 
 
-
 
NC_014165  Tbis_2331  putative winged helix family two component transcriptional regulator  43.66 
 
 		 166 aa  98.2  5e-20  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.836335 
 
 
-
 
NC_009523  RoseRS_0188  two component transcriptional regulator  47.87 
 
 		 245 aa  89.7  2e-17  Roseiflexus sp. RS-1  Bacteria  hitchhiker  0.00347389  normal  0.0545477 
 
 
-
 
NC_009767  Rcas_4351  two component transcriptional regulator  50.55 
 
 		 245 aa  87.8  6e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.110039  normal  1 
 
 
-
 
NC_013521  Sked_04480  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  49.15 
 
 		 232 aa  85.9  3e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.226813 
 
 
-
 
NC_013530  Xcel_2485  two component transcriptional regulator, winged helix family  49 
 
 		 243 aa  85.1  5e-16  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013169  Ksed_03550  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  51.06 
 
 		 261 aa  84.3  7e-16  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.329191  normal  1 
 
 
-
 
NC_012669  Bcav_1276  two component transcriptional regulator, winged helix family  46.67 
 
 		 242 aa  83.6  0.000000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.114994 
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  45.98 
 
 		 235 aa  83.6  0.000000000000001  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.203788 
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  44.35 
 
 		 257 aa  83.6  0.000000000000001  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  47.06 
 
 		 258 aa  82.4  0.000000000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  42.86 
 
 		 253 aa  82.4  0.000000000000003  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  44.34 
 
 		 236 aa  79.7  0.00000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1600  two component transcriptional regulator  48.68 
 
 		 224 aa  79.7  0.00000000000002  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000237714  n/a   
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  46.08 
 
 		 243 aa  79  0.00000000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_09580  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  46 
 
 		 244 aa  79  0.00000000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.132168 
 
 
-
 
NC_013061  Phep_2522  response regulator receiver  39.6 
 
 		 229 aa  79  0.00000000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.661278  normal  1 
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  46.46 
 
 		 247 aa  79  0.00000000000003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.186762 
 
 
-
 
NC_009664  Krad_1230  two component transcriptional regulator, winged helix family  48.86 
 
 		 254 aa  79  0.00000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.211629  normal  0.177188 
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  37.62 
 
 		 223 aa  79.3  0.00000000000003  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  42.72 
 
 		 226 aa  79  0.00000000000003  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  48.35 
 
 		 236 aa  79.3  0.00000000000003  Prosthecochloris aestuarii DSM 271  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_3846  two component transcriptional regulator, winged helix family  40.22 
 
 		 222 aa  78.6  0.00000000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  38.61 
 
 		 223 aa  78.6  0.00000000000004  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_007333  Tfu_2549  response regulator receiver  40.22 
 
 		 222 aa  78.2  0.00000000000005  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  45.45 
 
 		 250 aa  77.8  0.00000000000006  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  42.5 
 
 		 239 aa  77.8  0.00000000000006  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  45.1 
 
 		 241 aa  78.2  0.00000000000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.0000121276 
 
 
-
 
NC_011886  Achl_0805  putative two component transcriptional regulator, winged helix family  41.96 
 
 		 288 aa  77.8  0.00000000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008639  Cpha266_0880  two component transcriptional regulator  44.21 
 
 		 236 aa  77.8  0.00000000000007  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_1221  two component transcriptional regulator, winged helix family  47.37 
 
 		 256 aa  77.8  0.00000000000007  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.655279  normal  1 
 
 
-
 
NC_013132  Cpin_1224  two component transcriptional regulator, winged helix family  43.18 
 
 		 227 aa  77.8  0.00000000000008  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0117785  hitchhiker  0.00926138 
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  44.79 
 
 		 259 aa  77.4  0.00000000000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  37.62 
 
 		 223 aa  77.4  0.00000000000009  Bacillus cereus G9842  Bacteria  normal  1  normal  0.910988 
 
 
-
 
NC_005957  BT9727_1191  response regulator  37.62 
 
 		 223 aa  77  0.0000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  44.34 
 
 		 239 aa  77  0.0000000000001  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0279779 
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  43.96 
 
 		 236 aa  77  0.0000000000001  Magnetococcus sp. MC-1  Bacteria  normal  1  decreased coverage  0.00391258 
 
 
-
 
NC_013595  Sros_1333  response regulator receiver protein  38.95 
 
 		 222 aa  76.6  0.0000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.40527  normal  0.1595 
 
 
-
 
NC_006274  BCZK1193  response regulator  36.63 
 
 		 223 aa  76.6  0.0000000000002  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4122  two component transcriptional regulator, winged helix family  39.13 
 
 		 223 aa  76.6  0.0000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_007512  Plut_0632  two component transcriptional regulator  48.31 
 
 		 236 aa  76.3  0.0000000000002  Chlorobium luteolum DSM 273  Bacteria  normal  0.883969  normal  1 
 
 
-
 
NC_014165  Tbis_0707  winged helix family two component transcriptional regulator  38.95 
 
 		 222 aa  76.3  0.0000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  43.3 
 
 		 232 aa  76.3  0.0000000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_013411  GYMC61_0402  two component transcriptional regulator, winged helix family  45.16 
 
 		 241 aa  76.3  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_2250  two component transcriptional regulator  41.11 
 
 		 225 aa  75.9  0.0000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00000295266  n/a   
 
 
-
 
NC_013510  Tcur_1461  two component transcriptional regulator, winged helix family  46.73 
 
 		 225 aa  76.3  0.0000000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  0.616357  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  36.63 
 
 		 223 aa  76.6  0.0000000000002  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_008312  Tery_3164  two component transcriptional regulator  39.81 
 
 		 235 aa  76.6  0.0000000000002  Trichodesmium erythraeum IMS101  Bacteria  normal  1  hitchhiker  0.00750441 
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  42 
 
 		 232 aa  76.3  0.0000000000002  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  43.88 
 
 		 255 aa  76.3  0.0000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  36.63 
 
 		 223 aa  75.9  0.0000000000003  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  36.63 
 
 		 223 aa  75.9  0.0000000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  45.65 
 
 		 250 aa  75.5  0.0000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_6208  two component transcriptional regulator, winged helix family  53.41 
 
 		 226 aa  75.9  0.0000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  43.14 
 
 		 261 aa  75.5  0.0000000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_1399  two component transcriptional regulator  45.65 
 
 		 238 aa  75.5  0.0000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.129694  n/a   
 
 
-
 
NC_009674  Bcer98_1200  two component transcriptional regulator  44.57 
 
 		 238 aa  75.9  0.0000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  45.45 
 
 		 240 aa  75.1  0.0000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  45.92 
 
 		 231 aa  75.5  0.0000000000004  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.777838 
 
 
-
 
NC_011658  BCAH187_A5433  DNA-binding response regulator  43.59 
 
 		 223 aa  75.5  0.0000000000004  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_7218  winged helix family two component response transcriptional regulator  50 
 
 		 124 aa  74.7  0.0000000000005  Frankia sp. EAN1pec  Bacteria  normal  0.18436  normal  1 
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  43.48 
 
 		 230 aa  74.7  0.0000000000005  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_013172  Bfae_19400  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  45.56 
 
 		 279 aa  75.1  0.0000000000005  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0470356  n/a   
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  43.3 
 
 		 243 aa  74.7  0.0000000000005  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_008541  Arth_0657  response regulator receiver protein  43 
 
 		 290 aa  75.1  0.0000000000005  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B5569  DNA-binding response regulator  42.31 
 
 		 223 aa  74.7  0.0000000000006  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002976  SERP1055  DNA-binding response regulator SrrA  40.4 
 
 		 241 aa  74.7  0.0000000000006  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  36.63 
 
 		 223 aa  74.7  0.0000000000006  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5379  DNA-binding response regulator  42.31 
 
 		 223 aa  74.7  0.0000000000006  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_4944  DNA-binding response regulator  42.31 
 
 		 223 aa  74.7  0.0000000000006  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0109954  n/a   
 
 
-
 
NC_006274  BCZK4959  DNA-binding response regulator  42.31 
 
 		 223 aa  74.7  0.0000000000006  Bacillus cereus E33L  Bacteria  hitchhiker  0.000160223  n/a   
 
 
-
 
NC_007777  Francci3_0089  response regulator receiver protein  48 
 
 		 171 aa  74.7  0.0000000000006  Frankia sp. CcI3  Bacteria  normal  0.68554  normal  1 
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  47.67 
 
 		 257 aa  74.7  0.0000000000006  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A5385  DNA-binding response regulator  42.31 
 
 		 223 aa  74.7  0.0000000000006  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_1397  two component transcriptional regulator  43.27 
 
 		 261 aa  74.7  0.0000000000006  Roseiflexus sp. RS-1  Bacteria  normal  0.0231814  hitchhiker  0.000111966 
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  47.67 
 
 		 257 aa  74.7  0.0000000000006  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013216  Dtox_2915  two component transcriptional regulator, winged helix family  39.33 
 
 		 225 aa  74.7  0.0000000000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.892207  normal  0.300351 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  47.67 
 
 		 257 aa  74.7  0.0000000000006  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  36.63 
 
 		 223 aa  74.7  0.0000000000006  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS1386  DNA-binding response regulator ResD  44.57 
 
 		 238 aa  74.3  0.0000000000007  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_1359  response regulator  44.57 
 
 		 238 aa  74.3  0.0000000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0319788  n/a   
 
 
-
 
NC_006274  BCZK1358  response regulator  44.57 
 
 		 238 aa  74.3  0.0000000000007  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_1497  DNA-binding response regulator ResD  44.57 
 
 		 238 aa  74.3  0.0000000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.862661  n/a   
 
 
-
 
NC_011773  BCAH820_5353  DNA-binding response regulator  42.31 
 
 		 223 aa  74.3  0.0000000000007  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  43.33 
 
 		 227 aa  74.3  0.0000000000007  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.0239565 
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  47.67 
 
 		 267 aa  74.3  0.0000000000007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A1531  DNA-binding response regulator ResD  44.57 
 
 		 238 aa  74.3  0.0000000000007  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  42.42 
 
 		 251 aa  74.3  0.0000000000007  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_011772  BCG9842_B3814  DNA-binding response regulator ResD  44.57 
 
 		 238 aa  74.3  0.0000000000007  Bacillus cereus G9842  Bacteria  normal  1  hitchhiker  3.95849e-16 
 
 
-
 
NC_010184  BcerKBAB4_5055  two component transcriptional regulator  39.53 
 
 		 223 aa  74.3  0.0000000000008  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  47.67 
 
 		 278 aa  74.3  0.0000000000008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal  1 
 
 
-
 
NC_003909  BCE_1601  DNA-binding response regulator ResD  44.57 
 
 		 250 aa  73.9  0.0000000000009  Bacillus cereus ATCC 10987  Bacteria  normal  0.953648  n/a   
 
 
-
 
NC_013093  Amir_1805  putative two component transcriptional regulator, winged helix family  46.32 
 
 		 170 aa  73.9  0.0000000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_1569  DNA-binding response regulator ResD  44.57 
 
 		 250 aa  73.9  0.0000000000009  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.45334e-32 
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  40 
 
 		 243 aa  73.9  0.0000000000009  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal  1 
 
 
-
 
NC_011658  BCAH187_A1637  DNA-binding response regulator ResD  44.57 
 
 		 250 aa  73.9  0.0000000000009  Bacillus cereus AH187  Bacteria  normal  0.0246031  n/a   
 
 
-
 
NC_009921  Franean1_1612  two component transcriptional regulator  47.92 
 
 		 259 aa  73.9  0.0000000000009  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.00249249  normal  1 
 
 
-
 
NC_013169  Ksed_08380  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  42.7 
 
 		 244 aa  73.6  0.000000000001  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0276649  normal  0.165598 
 
 
-
 
NC_010001  Cphy_2827  two component transcriptional regulator  46.05 
 
 		 230 aa  73.9  0.000000000001  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
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