More than 300 homologs were found in PanDaTox collection
for query gene Ndas_0935 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_0935  cell envelope-related transcriptional attenuator  100 
 
 
465 aa  931    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0761113 
 
 
-
 
NC_007333  Tfu_2526  cell envelope-related transcriptional attenuator  49.46 
 
 
478 aa  418  9.999999999999999e-116  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0934  cell envelope-related transcriptional attenuator  52.52 
 
 
480 aa  417  9.999999999999999e-116  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0202033 
 
 
-
 
NC_014165  Tbis_3514  cell envelope-related transcriptional attenuator  36.62 
 
 
468 aa  261  2e-68  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  36 
 
 
481 aa  247  3e-64  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_013510  Tcur_4096  cell envelope-related transcriptional attenuator  33.74 
 
 
468 aa  244  1.9999999999999999e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  31.03 
 
 
530 aa  234  2.0000000000000002e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  34.53 
 
 
481 aa  231  2e-59  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0728  cell envelope-related transcriptional attenuator  33.33 
 
 
618 aa  228  2e-58  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0188197 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  35.28 
 
 
497 aa  216  5.9999999999999996e-55  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4745  cell envelope-related transcriptional attenuator  34.27 
 
 
584 aa  197  3e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0030  cell envelope-related transcriptional attenuator  35.68 
 
 
506 aa  192  1e-47  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
NC_007333  Tfu_2956  cell envelope-related transcriptional attenuator  33.54 
 
 
453 aa  187  5e-46  Thermobifida fusca YX  Bacteria  normal  0.482149  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  31.9 
 
 
509 aa  186  7e-46  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  31.46 
 
 
520 aa  184  4.0000000000000006e-45  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  31.64 
 
 
504 aa  180  4.999999999999999e-44  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_012669  Bcav_1166  cell envelope-related protein transcriptional attenuator  34.9 
 
 
395 aa  179  8e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  30.92 
 
 
505 aa  172  7.999999999999999e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  32.35 
 
 
551 aa  172  1e-41  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  31.16 
 
 
549 aa  169  1e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1167  cell envelope-related protein transcriptional attenuator  39.69 
 
 
417 aa  169  1e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2228  cell envelope-related transcriptional attenuator  28.12 
 
 
521 aa  169  1e-40  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000756142  n/a   
 
 
-
 
NC_008578  Acel_0412  cell envelope-related transcriptional attenuator  31.63 
 
 
491 aa  169  1e-40  Acidothermus cellulolyticus 11B  Bacteria  normal  0.245301  normal 
 
 
-
 
NC_011886  Achl_1965  cell envelope-related transcriptional attenuator  28.57 
 
 
487 aa  166  1.0000000000000001e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000312518 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  29.61 
 
 
734 aa  164  3e-39  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  33.58 
 
 
400 aa  162  1e-38  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0126  cell envelope-related transcriptional attenuator  29.68 
 
 
499 aa  162  2e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013131  Caci_7618  cell envelope-related transcriptional attenuator  29 
 
 
643 aa  159  7e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  32.13 
 
 
516 aa  159  7e-38  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08570  cell envelope-related function transcriptional attenuator common domain protein  33.23 
 
 
365 aa  158  2e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.671315  normal  0.595892 
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  34.75 
 
 
573 aa  157  3e-37  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7619  cell envelope-related transcriptional attenuator  32.51 
 
 
379 aa  154  2.9999999999999998e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  33.91 
 
 
395 aa  154  2.9999999999999998e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  31.83 
 
 
625 aa  153  5.9999999999999996e-36  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0711  cell envelope-related transcriptional attenuator  29.5 
 
 
526 aa  152  8.999999999999999e-36  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_3302  cell envelope-related transcriptional attenuator  32.43 
 
 
406 aa  150  6e-35  Nocardioides sp. JS614  Bacteria  normal  0.0160587  n/a   
 
 
-
 
NC_013131  Caci_7541  cell envelope-related transcriptional attenuator  30.29 
 
 
540 aa  149  9e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.371514 
 
 
-
 
NC_013530  Xcel_2594  cell envelope-related transcriptional attenuator  33.72 
 
 
442 aa  147  3e-34  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_4513  cell envelope-related transcriptional attenuator  30.11 
 
 
699 aa  147  4.0000000000000006e-34  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4600  cell envelope-related transcriptional attenuator  30.11 
 
 
699 aa  147  4.0000000000000006e-34  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1248  cell envelope-related transcriptional attenuator  32.69 
 
 
512 aa  147  4.0000000000000006e-34  Frankia sp. EAN1pec  Bacteria  normal  0.375848  normal  0.0192244 
 
 
-
 
NC_009338  Mflv_1666  cell envelope-related transcriptional attenuator  29.95 
 
 
649 aa  147  6e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4896  cell envelope-related transcriptional attenuator  30.21 
 
 
701 aa  145  1e-33  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  32.53 
 
 
349 aa  145  2e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3844  cell envelope-related protein transcriptional attenuator  32.23 
 
 
373 aa  144  5e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_3496  cell envelope-related transcriptional attenuator  33.72 
 
 
486 aa  142  9.999999999999999e-33  Frankia sp. CcI3  Bacteria  normal  0.625789  normal  0.409021 
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  30.4 
 
 
1336 aa  140  3e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5087  cell envelope-related transcriptional attenuator  30.66 
 
 
687 aa  141  3e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_08580  cell envelope-related function transcriptional attenuator common domain protein  33.76 
 
 
396 aa  141  3e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.783991  normal  0.393457 
 
 
-
 
NC_007777  Francci3_1558  cell envelope-related transcriptional attenuator  29.19 
 
 
545 aa  140  4.999999999999999e-32  Frankia sp. CcI3  Bacteria  normal  normal  0.931439 
 
 
-
 
NC_009380  Strop_4510  transcription attenuator LytR  32.04 
 
 
420 aa  140  7e-32  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  32.08 
 
 
619 aa  138  2e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_009953  Sare_5020  cell envelope-related transcriptional attenuator  33.2 
 
 
414 aa  138  2e-31  Salinispora arenicola CNS-205  Bacteria  normal  0.417569  hitchhiker  0.000783217 
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  29.44 
 
 
520 aa  138  2e-31  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  30.14 
 
 
390 aa  136  8e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2383  cell envelope-related transcriptional attenuator  34.44 
 
 
389 aa  135  9.999999999999999e-31  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0868762  hitchhiker  0.00772059 
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  32.88 
 
 
306 aa  136  9.999999999999999e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  32.19 
 
 
307 aa  135  1.9999999999999998e-30  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  33.1 
 
 
336 aa  135  1.9999999999999998e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_009565  TBFG_10837  hypothetical protein  25.11 
 
 
684 aa  135  1.9999999999999998e-30  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.000372154 
 
 
-
 
NC_008146  Mmcs_5038  cell envelope-related transcriptional attenuator  35.14 
 
 
311 aa  134  3e-30  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5126  cell envelope-related transcriptional attenuator  35.14 
 
 
311 aa  134  3e-30  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5418  cell envelope-related transcriptional attenuator  35.14 
 
 
311 aa  134  3e-30  Mycobacterium sp. JLS  Bacteria  normal  normal  0.710746 
 
 
-
 
NC_013174  Jden_1864  cell envelope-related transcriptional attenuator  33.21 
 
 
391 aa  132  1.0000000000000001e-29  Jonesia denitrificans DSM 20603  Bacteria  normal  0.383316  normal  0.036217 
 
 
-
 
NC_013159  Svir_16350  cell envelope-related transcriptional attenuator  33.57 
 
 
307 aa  132  2.0000000000000002e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0716913  normal  0.935262 
 
 
-
 
NC_013947  Snas_6386  cell envelope-related transcriptional attenuator  31.51 
 
 
382 aa  130  6e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1142  cell envelope-related transcriptional attenuator  30.4 
 
 
409 aa  129  9.000000000000001e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.671395  normal  0.110733 
 
 
-
 
NC_014165  Tbis_0046  cell envelope-related transcriptional attenuator  33.33 
 
 
320 aa  129  1.0000000000000001e-28  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2257  cell envelope-related transcriptional attenuator  30.3 
 
 
362 aa  124  5e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.518809 
 
 
-
 
NC_009921  Franean1_5205  cell envelope-related transcriptional attenuator  31.02 
 
 
560 aa  123  6e-27  Frankia sp. EAN1pec  Bacteria  normal  0.0714783  normal 
 
 
-
 
NC_013235  Namu_4529  cell envelope-related transcriptional attenuator  30.89 
 
 
365 aa  122  9.999999999999999e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  0.25457  normal 
 
 
-
 
NC_013169  Ksed_08470  cell envelope-related function transcriptional attenuator common domain protein  31.58 
 
 
394 aa  122  1.9999999999999998e-26  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.282031 
 
 
-
 
NC_012793  GWCH70_3046  cell envelope-related transcriptional attenuator  29.93 
 
 
322 aa  120  4.9999999999999996e-26  Geobacillus sp. WCH70  Bacteria  normal  0.634845  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  27.97 
 
 
563 aa  119  9.999999999999999e-26  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_009921  Franean1_5903  cell envelope-related transcriptional attenuator  30.4 
 
 
508 aa  118  1.9999999999999998e-25  Frankia sp. EAN1pec  Bacteria  normal  normal  0.667474 
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  30.71 
 
 
407 aa  118  1.9999999999999998e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_014158  Tpau_0136  cell envelope-related transcriptional attenuator  33.9 
 
 
466 aa  118  3e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1318  cell envelope-related transcriptional attenuator  29.39 
 
 
490 aa  117  3e-25  Mycobacterium sp. MCS  Bacteria  normal  0.940107  n/a   
 
 
-
 
NC_008705  Mkms_1335  cell envelope-related transcriptional attenuator  29.39 
 
 
490 aa  117  3e-25  Mycobacterium sp. KMS  Bacteria  normal  0.962054  normal  0.634397 
 
 
-
 
NC_009077  Mjls_1354  cell envelope-related transcriptional attenuator  29.39 
 
 
490 aa  117  3e-25  Mycobacterium sp. JLS  Bacteria  normal  0.0429862  normal  0.395159 
 
 
-
 
NC_013530  Xcel_1025  cell envelope-related transcriptional attenuator  30.16 
 
 
434 aa  116  7.999999999999999e-25  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.11457  n/a   
 
 
-
 
NC_007333  Tfu_2567  cell envelope-related transcriptional attenuator  29.35 
 
 
404 aa  114  4.0000000000000004e-24  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  26.29 
 
 
453 aa  114  5e-24  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_013510  Tcur_1808  cell envelope-related transcriptional attenuator  35.02 
 
 
424 aa  113  7.000000000000001e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0292903  n/a   
 
 
-
 
NC_013595  Sros_0120  Transcriptional regulator-like protein  31.96 
 
 
326 aa  112  1.0000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.224299  normal 
 
 
-
 
NC_014158  Tpau_1061  cell envelope-related transcriptional attenuator  27.48 
 
 
567 aa  111  2.0000000000000002e-23  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_28900  cell envelope-related function transcriptional attenuator common domain protein  26.5 
 
 
522 aa  111  2.0000000000000002e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385343 
 
 
-
 
NC_013093  Amir_1037  cell envelope-related transcriptional attenuator  25.25 
 
 
732 aa  111  3e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3959  cell envelope-related transcriptional attenuator  28.82 
 
 
463 aa  111  3e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_06080  cell envelope-related function transcriptional attenuator common domain protein  27.46 
 
 
538 aa  111  3e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.832186  normal  0.188153 
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  28.47 
 
 
495 aa  111  3e-23  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2100  cell envelope-related transcriptional attenuator  26.32 
 
 
393 aa  108  2e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  30.94 
 
 
329 aa  108  2e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_008541  Arth_3228  cell envelope-related transcriptional attenuator  30 
 
 
377 aa  108  2e-22  Arthrobacter sp. FB24  Bacteria  normal  0.0471557  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1838  cell envelope-related transcriptional attenuator  30.31 
 
 
333 aa  108  2e-22  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.00343174  n/a   
 
 
-
 
NC_013721  HMPREF0424_0589  putative transcriptional regulator  28.29 
 
 
498 aa  108  3e-22  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.581304 
 
 
-
 
NC_011772  BCG9842_B3352  transcription antiterminator, LytR family  30.32 
 
 
335 aa  107  4e-22  Bacillus cereus G9842  Bacteria  hitchhiker  0.0000199263  hitchhiker  0.0000000000000086496 
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  28.42 
 
 
310 aa  107  4e-22  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_011725  BCB4264_A1975  transcription antiterminator, LytR family  30.32 
 
 
333 aa  107  5e-22  Bacillus cereus B4264  Bacteria  normal  0.258453  n/a   
 
 
-
 
NC_013124  Afer_1145  cell envelope-related transcriptional attenuator  27.17 
 
 
543 aa  107  6e-22  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>