More than 300 homologs were found in PanDaTox collection
for query gene Ndas_0559 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  100 
 
 
305 aa  607  1e-173  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  75.33 
 
 
318 aa  446  1.0000000000000001e-124  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_05250  carbohydrate ABC transporter membrane protein  66.89 
 
 
309 aa  394  1e-108  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  62.17 
 
 
314 aa  389  1e-107  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  61.74 
 
 
317 aa  384  1e-106  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_014210  Ndas_2034  binding-protein-dependent transport systems inner membrane component  66.01 
 
 
323 aa  383  1e-105  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.059557  normal  0.598754 
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  61.84 
 
 
314 aa  384  1e-105  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  59.73 
 
 
314 aa  375  1e-103  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1704  putative transport system permease ABC transporter protein  64.53 
 
 
324 aa  372  1e-102  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0801  binding-protein-dependent transport systems inner membrane component  61.51 
 
 
319 aa  359  3e-98  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.836257  decreased coverage  0.00115511 
 
 
-
 
NC_013172  Bfae_29720  carbohydrate ABC transporter membrane protein  60.67 
 
 
312 aa  359  3e-98  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  58.33 
 
 
324 aa  359  4e-98  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3555  binding-protein-dependent transport systems inner membrane component  62.77 
 
 
313 aa  353  2e-96  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.582328  normal  0.269585 
 
 
-
 
NC_013530  Xcel_2648  binding-protein-dependent transport systems inner membrane component  60.93 
 
 
315 aa  347  1e-94  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.604604  n/a   
 
 
-
 
NC_009636  Smed_3328  binding-protein-dependent transport systems inner membrane component  57.19 
 
 
318 aa  344  1e-93  Sinorhizobium medicae WSM419  Bacteria  normal  0.670475  normal  0.953703 
 
 
-
 
NC_012850  Rleg_4345  binding-protein-dependent transport systems inner membrane component  55.17 
 
 
319 aa  340  2e-92  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000915897 
 
 
-
 
NC_011369  Rleg2_4016  binding-protein-dependent transport systems inner membrane component  54.86 
 
 
319 aa  340  2e-92  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2230  binding-protein-dependent transport systems inner membrane component  61.59 
 
 
316 aa  338  7e-92  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0920  binding-protein-dependent transport systems inner membrane component  59.46 
 
 
319 aa  335  7.999999999999999e-91  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1533  binding-protein-dependent transport systems inner membrane component  57.09 
 
 
318 aa  333  2e-90  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.384041  normal  0.0165665 
 
 
-
 
NC_011988  Avi_5581  ABC transporter membrane spanning protein (galacturonic acid)  55.29 
 
 
314 aa  327  2.0000000000000001e-88  Agrobacterium vitis S4  Bacteria  normal  0.512211  n/a   
 
 
-
 
NC_012669  Bcav_0792  binding-protein-dependent transport systems inner membrane component  58.42 
 
 
320 aa  324  1e-87  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00615148 
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  53.42 
 
 
319 aa  322  5e-87  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  55.7 
 
 
322 aa  319  3e-86  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_013093  Amir_0971  binding-protein-dependent transport systems inner membrane component  56.14 
 
 
318 aa  307  1.0000000000000001e-82  Actinosynnema mirum DSM 43827  Bacteria  normal  0.402329  n/a   
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  50 
 
 
321 aa  306  3e-82  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_012034  Athe_2080  binding-protein-dependent transport systems inner membrane component  53.79 
 
 
308 aa  300  1e-80  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.136718  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  48.44 
 
 
293 aa  300  2e-80  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  50 
 
 
296 aa  299  4e-80  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  50.35 
 
 
296 aa  298  7e-80  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  50.35 
 
 
296 aa  298  8e-80  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_008541  Arth_3323  binding-protein-dependent transport systems inner membrane component  51.48 
 
 
317 aa  296  2e-79  Arthrobacter sp. FB24  Bacteria  normal  0.0473972  n/a   
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  50 
 
 
296 aa  296  3e-79  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  49.29 
 
 
296 aa  293  2e-78  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  49.29 
 
 
296 aa  293  2e-78  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_011886  Achl_3123  binding-protein-dependent transport systems inner membrane component  51.8 
 
 
317 aa  293  2e-78  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.205507 
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  49.82 
 
 
296 aa  293  3e-78  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_010159  YpAngola_A2645  oligogalacturonide ABC tansporter, permease  48.94 
 
 
296 aa  291  1e-77  Yersinia pestis Angola  Bacteria  normal  0.952468  normal  0.0439933 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  48.07 
 
 
305 aa  286  2.9999999999999996e-76  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  47.06 
 
 
292 aa  285  9e-76  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0438  binding-protein-dependent transport systems inner membrane component  49.3 
 
 
302 aa  283  3.0000000000000004e-75  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000597022  n/a   
 
 
-
 
NC_013517  Sterm_0698  binding-protein-dependent transport systems inner membrane component  44.79 
 
 
293 aa  275  5e-73  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  46.05 
 
 
298 aa  273  3e-72  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2459  binding-protein-dependent transport systems inner membrane component  47.18 
 
 
331 aa  273  3e-72  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.216304  n/a   
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  46.25 
 
 
316 aa  265  8e-70  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  45.34 
 
 
316 aa  248  6e-65  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  44.33 
 
 
305 aa  248  8e-65  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  43.79 
 
 
309 aa  248  1e-64  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  43.19 
 
 
313 aa  247  2e-64  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  41.83 
 
 
305 aa  246  4e-64  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  44.26 
 
 
314 aa  242  5e-63  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  42.81 
 
 
315 aa  241  2e-62  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  42.12 
 
 
316 aa  237  2e-61  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  40.72 
 
 
317 aa  233  2.0000000000000002e-60  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  46.01 
 
 
306 aa  226  5.0000000000000005e-58  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  41.16 
 
 
321 aa  225  6e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  42.86 
 
 
305 aa  224  1e-57  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  43.25 
 
 
317 aa  224  2e-57  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  40.27 
 
 
321 aa  222  7e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_009523  RoseRS_3621  binding-protein-dependent transport systems inner membrane component  39.45 
 
 
335 aa  222  7e-57  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  44.93 
 
 
283 aa  220  1.9999999999999999e-56  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  42.76 
 
 
307 aa  219  5e-56  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  42.56 
 
 
307 aa  217  2e-55  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_009767  Rcas_0514  binding-protein-dependent transport systems inner membrane component  38.84 
 
 
335 aa  217  2.9999999999999998e-55  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.950902  normal 
 
 
-
 
NC_013525  Tter_0507  binding-protein-dependent transport systems inner membrane component  41.84 
 
 
309 aa  213  3.9999999999999995e-54  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
292 aa  209  4e-53  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  42 
 
 
320 aa  209  6e-53  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  39.19 
 
 
319 aa  208  1e-52  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  39.47 
 
 
321 aa  207  2e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  40.15 
 
 
301 aa  206  4e-52  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  39.93 
 
 
299 aa  204  1e-51  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  40.2 
 
 
302 aa  202  6e-51  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  40.21 
 
 
285 aa  201  9.999999999999999e-51  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_013411  GYMC61_1728  binding-protein-dependent transport systems inner membrane component  40.44 
 
 
299 aa  195  8.000000000000001e-49  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_2544  binding-protein-dependent transport systems inner membrane component  40.33 
 
 
313 aa  192  5e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  32.78 
 
 
315 aa  191  1e-47  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  36.11 
 
 
296 aa  191  1e-47  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2730  binding-protein-dependent transport systems inner membrane component  37.97 
 
 
300 aa  188  1e-46  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  37.29 
 
 
317 aa  185  7e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2266  binding-protein-dependent transport systems inner membrane component  40.88 
 
 
296 aa  184  1.0000000000000001e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000392628 
 
 
-
 
NC_010001  Cphy_0593  binding-protein-dependent transport systems inner membrane component  34.52 
 
 
308 aa  184  1.0000000000000001e-45  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000379306  n/a   
 
 
-
 
NC_013174  Jden_0512  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
318 aa  185  1.0000000000000001e-45  Jonesia denitrificans DSM 20603  Bacteria  hitchhiker  0.000000473727  hitchhiker  0.00124128 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
309 aa  183  3e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  40 
 
 
307 aa  183  3e-45  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  40 
 
 
307 aa  183  3e-45  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  38.24 
 
 
306 aa  183  3e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_011831  Cagg_1687  binding-protein-dependent transport systems inner membrane component  35.92 
 
 
333 aa  182  8.000000000000001e-45  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  35.59 
 
 
295 aa  181  1e-44  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  39.3 
 
 
291 aa  181  1e-44  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_012034  Athe_0400  binding-protein-dependent transport systems inner membrane component  34.4 
 
 
295 aa  181  1e-44  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.000000000506379  n/a   
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
300 aa  181  1e-44  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  38.03 
 
 
313 aa  180  2.9999999999999997e-44  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  36.84 
 
 
314 aa  179  4.999999999999999e-44  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  36.84 
 
 
314 aa  179  4.999999999999999e-44  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1656  binding-protein-dependent transport systems inner membrane component  36.51 
 
 
318 aa  178  9e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.152531  normal  0.26367 
 
 
-
 
NC_013525  Tter_0184  binding-protein-dependent transport systems inner membrane component  40.33 
 
 
330 aa  178  1e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_5821  sugar ABC transporter, permease protein  36.22 
 
 
315 aa  177  2e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.286987  normal  0.812253 
 
 
-
 
NC_011886  Achl_3270  binding-protein-dependent transport systems inner membrane component  38.36 
 
 
321 aa  176  3e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  38.25 
 
 
307 aa  176  4e-43  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  38.38 
 
 
294 aa  176  4e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
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