65 homologs were found in PanDaTox collection
for query gene Ndas_0305 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_0305  putative anti-sigma regulatory factor, serine/threonine protein kinase  100 
 
 
184 aa  375  1e-103  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.12283  normal  0.285434 
 
 
-
 
NC_014210  Ndas_3499  putative anti-sigma regulatory factor, serine/threonine protein kinase  50.56 
 
 
187 aa  170  1e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1297  hypothetical protein  48.91 
 
 
187 aa  166  2e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4370  putative signal transduction histidine kinase  35.21 
 
 
134 aa  72  0.000000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0014  putative signal transduction histidine kinase  34.59 
 
 
160 aa  65.9  0.0000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1448  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.49 
 
 
164 aa  64.3  0.000000001  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0047791  n/a   
 
 
-
 
NC_013510  Tcur_1233  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.86 
 
 
151 aa  63.2  0.000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  0.226283  n/a   
 
 
-
 
NC_014210  Ndas_0531  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.3 
 
 
207 aa  62.4  0.000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.111836  normal 
 
 
-
 
NC_013510  Tcur_1416  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.06 
 
 
151 aa  61.6  0.000000006  Thermomonospora curvata DSM 43183  Bacteria  normal  0.034656  n/a   
 
 
-
 
NC_013131  Caci_8587  putative signal transduction histidine kinase  31.34 
 
 
158 aa  60.8  0.00000001  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.00197112  normal  0.613164 
 
 
-
 
NC_013595  Sros_7843  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.82 
 
 
137 aa  59.7  0.00000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.5414  normal 
 
 
-
 
NC_007333  Tfu_0265  hypothetical protein  33.79 
 
 
163 aa  57.8  0.00000009  Thermobifida fusca YX  Bacteria  normal  0.620382  n/a   
 
 
-
 
NC_007333  Tfu_2776  hypothetical protein  31.82 
 
 
137 aa  57  0.0000001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2295  hypothetical protein  31.91 
 
 
200 aa  57  0.0000001  Thermobifida fusca YX  Bacteria  normal  0.147419  n/a   
 
 
-
 
NC_013510  Tcur_1945  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.11 
 
 
142 aa  56.6  0.0000002  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00291504  n/a   
 
 
-
 
NC_013510  Tcur_0429  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.4 
 
 
196 aa  55.1  0.0000006  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0019  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.56 
 
 
255 aa  54.7  0.0000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5315  protein serine phosphatase with GAF(s) sensor(s)  33.05 
 
 
750 aa  53.5  0.000002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.315721 
 
 
-
 
NC_009380  Strop_4104  stage II sporulation E family protein  32.59 
 
 
694 aa  53.1  0.000002  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1655  hypothetical protein  34.15 
 
 
162 aa  52.8  0.000003  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013596  Sros_9396  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.86 
 
 
171 aa  52.4  0.000004  Streptosporangium roseum DSM 43021  Bacteria  n/a    n/a   
 
 
-
 
NC_007333  Tfu_1247  hypothetical protein  31.91 
 
 
148 aa  52.4  0.000004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4525  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.17 
 
 
130 aa  50.4  0.00001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3148  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.11 
 
 
146 aa  50.8  0.00001  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00947281  normal 
 
 
-
 
NC_009953  Sare_4524  protein serine/threonine phosphatase  31.76 
 
 
693 aa  50.4  0.00001  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00280283 
 
 
-
 
NC_013947  Snas_1052  protein serine phosphatase with GAF(s) sensor(s)  40.4 
 
 
655 aa  49.7  0.00002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.620454  normal 
 
 
-
 
NC_013159  Svir_32040  histidine kinase  36.27 
 
 
156 aa  49.7  0.00003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.3856  normal  0.302354 
 
 
-
 
NC_013131  Caci_7320  putative anti-sigma regulatory factor, serine/threonine protein kinase  35 
 
 
288 aa  48.5  0.00005  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.000252308  decreased coverage  0.00000000279842 
 
 
-
 
NC_013131  Caci_2800  putative signal transduction histidine kinase  30.95 
 
 
135 aa  48.5  0.00005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.366639  normal  0.788147 
 
 
-
 
NC_009921  Franean1_0664  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.21 
 
 
147 aa  48.1  0.00006  Frankia sp. EAN1pec  Bacteria  normal  normal  0.535186 
 
 
-
 
NC_013757  Gobs_4668  ATP-binding region ATPase domain protein  34.06 
 
 
148 aa  48.5  0.00006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0976  hypothetical protein  37.1 
 
 
158 aa  48.1  0.00007  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2541  signal transduction histidine kinase regulating citrate/malate metabolism  35.2 
 
 
156 aa  47.4  0.0001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.7405  normal 
 
 
-
 
NC_013595  Sros_8758  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.95 
 
 
192 aa  46.2  0.0003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5442  putative signal transduction histidine kinase  32.85 
 
 
167 aa  45.4  0.0004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0979  hypothetical protein  27.4 
 
 
201 aa  45.4  0.0004  Thermobifida fusca YX  Bacteria  normal  0.454512  n/a   
 
 
-
 
NC_013510  Tcur_3058  hypothetical protein  35.11 
 
 
134 aa  45.1  0.0005  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000540346  n/a   
 
 
-
 
NC_014211  Ndas_5201  protein serine phosphatase with GAF(s) sensor(s)  37.38 
 
 
728 aa  45.4  0.0005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.171311  normal  0.162808 
 
 
-
 
NC_008699  Noca_1263  response regulator receiver  31.88 
 
 
282 aa  44.7  0.0008  Nocardioides sp. JS614  Bacteria  normal  0.0593741  n/a   
 
 
-
 
NC_007333  Tfu_1752  protein phosphatase 2C-like  30.08 
 
 
591 aa  44.7  0.0008  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0743  putative PAS/PAC sensor protein  30.94 
 
 
855 aa  44.3  0.001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.565533 
 
 
-
 
NC_009664  Krad_4348  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.35 
 
 
119 aa  43.9  0.001  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00391365  normal 
 
 
-
 
NC_009664  Krad_0777  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.65 
 
 
130 aa  43.5  0.002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0574046  hitchhiker  0.00140169 
 
 
-
 
NC_013595  Sros_2074  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.36 
 
 
136 aa  43.5  0.002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.148055  normal  0.91426 
 
 
-
 
NC_013131  Caci_6631  putative signal transduction histidine kinase  28.8 
 
 
135 aa  43.5  0.002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0674873 
 
 
-
 
NC_014151  Cfla_0586  signal transduction histidine kinase, LytS  28 
 
 
123 aa  43.5  0.002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0183303  hitchhiker  0.00998812 
 
 
-
 
NC_009664  Krad_0168  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.85 
 
 
149 aa  42.7  0.003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.129671  normal 
 
 
-
 
NC_009664  Krad_0097  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.62 
 
 
155 aa  42.7  0.003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0115417  normal  0.062689 
 
 
-
 
NC_009921  Franean1_6225  putative PAS/PAC sensor protein  31.86 
 
 
713 aa  42.7  0.003  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2108  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.28 
 
 
151 aa  42.7  0.003  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.262944 
 
 
-
 
NC_007777  Francci3_4051  putative serine/threonine kinase anti-sigma factor  29.61 
 
 
281 aa  42.7  0.003  Frankia sp. CcI3  Bacteria  normal  0.932154  normal 
 
 
-
 
NC_014210  Ndas_2582  putative signal transduction histidine kinase  34.12 
 
 
150 aa  42.4  0.004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0114014 
 
 
-
 
NC_007777  Francci3_2536  putative serine/threonine kinase anti-sigma factor  36.05 
 
 
199 aa  42.4  0.004  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4531  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.34 
 
 
135 aa  42  0.004  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.556785  normal  0.468222 
 
 
-
 
NC_008009  Acid345_3098  aminotransferase  33.72 
 
 
449 aa  42.4  0.004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.481436 
 
 
-
 
NC_009664  Krad_4080  protein serine phosphatase with GAF(s) sensor(s)  31.75 
 
 
738 aa  42.4  0.004  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.32388  normal 
 
 
-
 
NC_014211  Ndas_5447  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.24 
 
 
178 aa  42  0.005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.279977  normal 
 
 
-
 
NC_009664  Krad_3741  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.57 
 
 
133 aa  41.6  0.006  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.217317  normal  0.012325 
 
 
-
 
NC_013510  Tcur_0874  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.58 
 
 
205 aa  41.6  0.006  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1989  putative PAS/PAC sensor protein  33.67 
 
 
722 aa  41.6  0.007  Frankia sp. CcI3  Bacteria  normal  0.965966  normal 
 
 
-
 
NC_013510  Tcur_2641  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.97 
 
 
122 aa  41.2  0.009  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000159202  n/a   
 
 
-
 
NC_009921  Franean1_0665  protein serine/threonine phosphatase  30.5 
 
 
800 aa  41.2  0.009  Frankia sp. EAN1pec  Bacteria  normal  normal  0.72005 
 
 
-
 
NC_008009  Acid345_2317  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.66 
 
 
155 aa  40.8  0.01  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.128595  normal  0.13523 
 
 
-
 
NC_007777  Francci3_4050  serine phosphatase  32.63 
 
 
766 aa  40.8  0.01  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0104  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.33 
 
 
141 aa  40.8  0.01  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.141556  normal  0.0323603 
 
 
-
 
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