4 homologs were found in PanDaTox collection
for query gene Namu_2010 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_2010    100 
 
 
478 bp  948    Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00624773  decreased coverage  0.000128562 
 
 
-
 
NC_010682  Rpic_0424  two component transcriptional regulator, winged helix family  96.67 
 
 
741 bp  52  0.0001  Ralstonia pickettii 12J  Bacteria  normal  0.116445  hitchhiker  0.0000956185 
 
 
-
 
NC_008786  Veis_4419  CDP-glucose 4,6-dehydratase  100 
 
 
1086 bp  46.1  0.009  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.67049 
 
 
-
 
NC_013757  Gobs_1712  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein  93.55 
 
 
942 bp  46.1  0.009  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.560115  n/a   
 
 
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