More than 300 homologs were found in PanDaTox collection
for query gene Namu_0523 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  100 
 
 
230 aa  442  1e-123  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1269  two component transcriptional regulator, LuxR family  54.95 
 
 
226 aa  213  1.9999999999999998e-54  Conexibacter woesei DSM 14684  Bacteria  normal  hitchhiker  0.00432991 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  52.7 
 
 
220 aa  212  3.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.495874 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  53.95 
 
 
229 aa  212  4.9999999999999996e-54  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.16 
 
 
226 aa  211  5.999999999999999e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  54.09 
 
 
220 aa  210  1e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  56.05 
 
 
227 aa  209  2e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  52.75 
 
 
221 aa  209  4e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  53.02 
 
 
221 aa  204  7e-52  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  53.3 
 
 
234 aa  204  1e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  53.6 
 
 
226 aa  202  3e-51  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  53.33 
 
 
227 aa  202  5e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  53.78 
 
 
230 aa  200  9.999999999999999e-51  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  53.18 
 
 
223 aa  201  9.999999999999999e-51  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  54.13 
 
 
239 aa  200  9.999999999999999e-51  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  55.14 
 
 
213 aa  199  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  52.94 
 
 
220 aa  198  5e-50  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  50.68 
 
 
221 aa  197  9e-50  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  50.9 
 
 
225 aa  196  2.0000000000000003e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_014210  Ndas_2087  two component transcriptional regulator, LuxR family  53.33 
 
 
247 aa  196  2.0000000000000003e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.73112  normal 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  54.02 
 
 
230 aa  196  2.0000000000000003e-49  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  52.04 
 
 
230 aa  196  3e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  55.35 
 
 
215 aa  196  3e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  52.09 
 
 
219 aa  196  4.0000000000000005e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  51.8 
 
 
226 aa  195  4.0000000000000005e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  51.13 
 
 
226 aa  195  5.000000000000001e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  51.16 
 
 
219 aa  195  5.000000000000001e-49  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  51.83 
 
 
224 aa  195  6e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  52.78 
 
 
220 aa  195  6e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  51.56 
 
 
225 aa  194  1e-48  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  54.26 
 
 
225 aa  194  1e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013595  Sros_5619  response regulator receiver protein  53.24 
 
 
226 aa  193  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0556461  normal  0.802866 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  49.54 
 
 
225 aa  193  2e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137578 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  53.6 
 
 
224 aa  193  2e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  53.15 
 
 
221 aa  192  4e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  49.77 
 
 
219 aa  191  7e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  49.3 
 
 
219 aa  191  7e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  51.79 
 
 
225 aa  191  9e-48  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  52.36 
 
 
215 aa  190  1e-47  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  51.16 
 
 
220 aa  191  1e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  49.07 
 
 
222 aa  190  2e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  50.23 
 
 
220 aa  189  2e-47  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal 
 
 
-
 
NC_013947  Snas_4575  two component transcriptional regulator, LuxR family  51.38 
 
 
224 aa  190  2e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.703378  normal  0.112036 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  53.24 
 
 
214 aa  189  2.9999999999999997e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  48.23 
 
 
230 aa  189  4e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  50.68 
 
 
223 aa  189  4e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_012669  Bcav_2710  two component transcriptional regulator, LuxR family  52.7 
 
 
230 aa  189  4e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.248821  normal  0.606697 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  50.23 
 
 
217 aa  188  5e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  50.7 
 
 
218 aa  188  5e-47  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  50.68 
 
 
221 aa  188  5e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  51.4 
 
 
239 aa  188  5e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2270  two component transcriptional regulator, LuxR family  49.78 
 
 
242 aa  188  5e-47  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000113212 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  48.23 
 
 
226 aa  188  5.999999999999999e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.36 
 
 
229 aa  188  5.999999999999999e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  50.69 
 
 
225 aa  188  5.999999999999999e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  52.04 
 
 
223 aa  188  5.999999999999999e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  48.18 
 
 
221 aa  188  7e-47  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  49.78 
 
 
225 aa  186  2e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  49.77 
 
 
224 aa  186  2e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  47.39 
 
 
234 aa  187  2e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  51.4 
 
 
216 aa  186  2e-46  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013093  Amir_4260  two component transcriptional regulator, LuxR family  50.7 
 
 
217 aa  186  2e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1049  two component transcriptional regulator, LuxR family  49.55 
 
 
222 aa  187  2e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.661499  normal  0.245945 
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  51.17 
 
 
215 aa  186  3e-46  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  50.67 
 
 
228 aa  186  3e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  48.05 
 
 
231 aa  186  4e-46  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  53.67 
 
 
209 aa  185  4e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  49.35 
 
 
234 aa  185  5e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_013172  Bfae_11600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.67 
 
 
225 aa  185  5e-46  Brachybacterium faecium DSM 4810  Bacteria  decreased coverage  0.00120804  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  48.64 
 
 
218 aa  185  6e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  50.23 
 
 
218 aa  185  6e-46  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013441  Gbro_3475  response regulator receiver  49.55 
 
 
228 aa  185  6e-46  Gordonia bronchialis DSM 43247  Bacteria  normal  0.849127  n/a   
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  51.83 
 
 
217 aa  184  7e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  48.15 
 
 
218 aa  184  7e-46  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  53.55 
 
 
302 aa  184  8e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  47.95 
 
 
224 aa  184  8e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  49.53 
 
 
214 aa  184  8e-46  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  50.66 
 
 
233 aa  184  9e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  50.68 
 
 
228 aa  184  9e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  51.61 
 
 
215 aa  184  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7606  response regulator receiver protein  49.54 
 
 
214 aa  184  1.0000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  47.77 
 
 
225 aa  184  1.0000000000000001e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  47.27 
 
 
241 aa  184  1.0000000000000001e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  51.58 
 
 
222 aa  184  1.0000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013131  Caci_5719  two component transcriptional regulator, LuxR family  52.84 
 
 
232 aa  183  2.0000000000000003e-45  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  49.07 
 
 
221 aa  182  5.0000000000000004e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  53.02 
 
 
220 aa  181  6e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal 
 
 
-
 
NC_014151  Cfla_0278  two component transcriptional regulator, LuxR family  49.54 
 
 
225 aa  181  9.000000000000001e-45  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000789071 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  44.95 
 
 
219 aa  180  2e-44  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  47.56 
 
 
228 aa  180  2e-44  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  49.53 
 
 
211 aa  179  2e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1652  two component LuxR family transcriptional regulator  50.47 
 
 
217 aa  179  2e-44  Frankia sp. EAN1pec  Bacteria  normal  0.495895  normal  0.106337 
 
 
-
 
NC_013131  Caci_7843  two component transcriptional regulator, LuxR family  47.79 
 
 
231 aa  179  2e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.176081 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  46.4 
 
 
224 aa  179  2.9999999999999997e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_012669  Bcav_3028  two component transcriptional regulator, LuxR family  50.22 
 
 
225 aa  179  2.9999999999999997e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.211566  decreased coverage  0.0000266978 
 
 
-
 
NC_013131  Caci_1951  two component transcriptional regulator, LuxR family  48.43 
 
 
226 aa  179  4e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0924411 
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  49.77 
 
 
221 aa  179  4e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  48.89 
 
 
234 aa  179  4.999999999999999e-44  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  47.49 
 
 
230 aa  178  5.999999999999999e-44  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  47.09 
 
 
239 aa  178  8e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.377169 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>