9 homologs were found in PanDaTox collection
for query gene Mthe_0436 on replicon NC_008553
Organism: Methanosaeta thermophila PT



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008553  Mthe_0436  CopG/Arc/MetJ family transcriptional regulator  100 
 
 
55 aa  113  9e-25  Methanosaeta thermophila PT  Archaea  decreased coverage  6.44308e-08  n/a   
 
 
-
 
NC_007355  Mbar_A1024  hypothetical protein  74.55 
 
 
56 aa  88.6  3e-17  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_007955  Mbur_2150  hypothetical protein  61.82 
 
 
56 aa  77  8e-14  Methanococcoides burtonii DSM 6242  Archaea  normal  0.024603  n/a   
 
 
-
 
NC_012028  Hlac_2923  putative transcriptional regulator, CopG/Arc/MetJ family  60 
 
 
62 aa  72.8  2e-12  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_0996  putative transcriptional regulator, CopG/Arc/MetJ family  52.73 
 
 
58 aa  67.4  7e-11  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.734219  normal 
 
 
-
 
NC_013922  Nmag_2049  putative transcriptional regulator, CopG/Arc/MetJ family  56.36 
 
 
59 aa  67.4  7e-11  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_012029  Hlac_0411  putative transcriptional regulator, CopG/Arc/MetJ family  57.41 
 
 
77 aa  64.3  5e-10  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.823906  normal 
 
 
-
 
NC_013158  Huta_1036  putative transcriptional regulator, CopG family  52.83 
 
 
58 aa  63.9  7e-10  Halorhabdus utahensis DSM 12940  Archaea  normal  0.826763  n/a   
 
 
-
 
NC_013743  Htur_0166  putative transcriptional regulator, CopG/Arc/MetJ family  58.18 
 
 
60 aa  51.6  4e-06  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>