271 homologs were found in PanDaTox collection
for query gene Msil_3652 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011666  Msil_3652  large-conductance mechanosensitive channel  100 
 
 
134 aa  266  1e-70  Methylocella silvestris BL2  Bacteria  n/a    normal  0.326365 
 
 
-
 
NC_009667  Oant_0410  large-conductance mechanosensitive channel  66.67 
 
 
137 aa  187  2.9999999999999997e-47  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0318  large-conductance mechanosensitive channel  66.67 
 
 
138 aa  183  7e-46  Brucella suis 1330  Bacteria  normal  0.384644  n/a   
 
 
-
 
NC_009505  BOV_0334  large-conductance mechanosensitive channel  65.94 
 
 
138 aa  182  1.0000000000000001e-45  Brucella ovis ATCC 25840  Bacteria  normal  0.0803754  n/a   
 
 
-
 
NC_008783  BARBAKC583_0292  large-conductance mechanosensitive channel  60.29 
 
 
138 aa  166  9e-41  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1928  large-conductance mechanosensitive channel  55.8 
 
 
139 aa  154  4e-37  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.425698 
 
 
-
 
NC_008254  Meso_0089  large conductance mechanosensitive channel protein  56.52 
 
 
142 aa  146  1.0000000000000001e-34  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_6045  large conductance mechanosensitive channel protein  55.15 
 
 
163 aa  144  5e-34  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2962  large-conductance mechanosensitive channel  51.09 
 
 
159 aa  142  1e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2607  large conductance mechanosensitive channel protein  53.57 
 
 
142 aa  142  2e-33  Methylobacterium populi BJ001  Bacteria  normal  0.526175  normal  0.681771 
 
 
-
 
NC_007925  RPC_2630  large conductance mechanosensitive channel protein  55.22 
 
 
138 aa  141  4e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.425108  normal  0.108359 
 
 
-
 
NC_009720  Xaut_0055  large conductance mechanosensitive channel protein  54.68 
 
 
140 aa  140  5e-33  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.153997 
 
 
-
 
NC_010505  Mrad2831_1030  large conductance mechanosensitive channel protein  54.29 
 
 
139 aa  140  5e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.184236  normal  0.070135 
 
 
-
 
NC_009485  BBta_4693  large-conductance mechanosensitive channel  52.55 
 
 
138 aa  140  5e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0941617 
 
 
-
 
NC_010172  Mext_2579  large conductance mechanosensitive channel protein  52.14 
 
 
141 aa  140  7e-33  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2802  large conductance mechanosensitive channel protein  52.14 
 
 
141 aa  140  7e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.21352  normal 
 
 
-
 
NC_007964  Nham_2261  large-conductance mechanosensitive channel  52.9 
 
 
139 aa  139  9e-33  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2603  large-conductance mechanosensitive channel  53.33 
 
 
143 aa  137  3e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.240683  normal 
 
 
-
 
NC_009049  Rsph17029_2379  large-conductance mechanosensitive channel  52.82 
 
 
146 aa  137  6e-32  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.567154 
 
 
-
 
NC_003295  RSc2930  large-conductance mechanosensitive channel  53.24 
 
 
141 aa  137  7e-32  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0941  large conductance mechanosensitive channel protein  52.55 
 
 
137 aa  136  8.999999999999999e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.954406  normal 
 
 
-
 
NC_007493  RSP_0724  large-conductance mechanosensitive channel  52.82 
 
 
146 aa  136  8.999999999999999e-32  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2641  large-conductance mechanosensitive channel  49.63 
 
 
143 aa  136  1e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  hitchhiker  0.00276841 
 
 
-
 
NC_012850  Rleg_0253  large-conductance mechanosensitive channel  53.1 
 
 
145 aa  135  2e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.410741  normal 
 
 
-
 
NC_007973  Rmet_3231  large-conductance mechanosensitive channel  51.09 
 
 
144 aa  135  2e-31  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3208  large conductance mechanosensitive channel protein  52.86 
 
 
141 aa  135  2e-31  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.0654251  normal  0.948556 
 
 
-
 
NC_012856  Rpic12D_2860  large-conductance mechanosensitive channel  50.36 
 
 
142 aa  134  5e-31  Ralstonia pickettii 12D  Bacteria  normal  normal  0.219386 
 
 
-
 
NC_010682  Rpic_3207  large-conductance mechanosensitive channel  50.36 
 
 
142 aa  134  6.0000000000000005e-31  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0166  large-conductance mechanosensitive channel  53.9 
 
 
142 aa  131  3e-30  Sinorhizobium medicae WSM419  Bacteria  normal  0.3696  normal  0.313526 
 
 
-
 
NC_006348  BMA1501  large-conductance mechanosensitive channel  48.23 
 
 
143 aa  130  7.999999999999999e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  0.917907  n/a   
 
 
-
 
NC_007651  BTH_I2079  large-conductance mechanosensitive channel  48.23 
 
 
143 aa  130  7.999999999999999e-30  Burkholderia thailandensis E264  Bacteria  normal  0.449669  n/a   
 
 
-
 
NC_008262  CPR_0163  large-conductance mechanosensitive channel  53.17 
 
 
155 aa  130  7.999999999999999e-30  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2000  large-conductance mechanosensitive channel  48.23 
 
 
143 aa  130  7.999999999999999e-30  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3310  large-conductance mechanosensitive channel  48.23 
 
 
143 aa  130  7.999999999999999e-30  Burkholderia mallei NCTC 10229  Bacteria  decreased coverage  0.00104042  n/a   
 
 
-
 
NC_009074  BURPS668_2373  large-conductance mechanosensitive channel  48.23 
 
 
143 aa  130  7.999999999999999e-30  Burkholderia pseudomallei 668  Bacteria  normal  0.140991  n/a   
 
 
-
 
NC_009076  BURPS1106A_2415  large-conductance mechanosensitive channel  48.23 
 
 
143 aa  130  7.999999999999999e-30  Burkholderia pseudomallei 1106a  Bacteria  normal  0.258205  n/a   
 
 
-
 
NC_009080  BMA10247_1272  large-conductance mechanosensitive channel  48.23 
 
 
143 aa  130  7.999999999999999e-30  Burkholderia mallei NCTC 10247  Bacteria  normal  0.404097  n/a   
 
 
-
 
NC_009428  Rsph17025_2443  large-conductance mechanosensitive channel  49.65 
 
 
146 aa  130  7.999999999999999e-30  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.954561  normal  0.582665 
 
 
-
 
NC_007948  Bpro_0820  large-conductance mechanosensitive channel  47.14 
 
 
151 aa  129  1.0000000000000001e-29  Polaromonas sp. JS666  Bacteria  normal  0.577469  normal 
 
 
-
 
NC_007434  BURPS1710b_2521  large-conductance mechanosensitive channel  48.23 
 
 
199 aa  129  2.0000000000000002e-29  Burkholderia pseudomallei 1710b  Bacteria  normal  0.334793  n/a   
 
 
-
 
NC_011369  Rleg2_0225  large-conductance mechanosensitive channel  54.23 
 
 
145 aa  128  3e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_0712  large-conductance mechanosensitive channel  48.2 
 
 
142 aa  128  3e-29  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.23692 
 
 
-
 
NC_010524  Lcho_0929  large-conductance mechanosensitive channel  48.55 
 
 
140 aa  127  6e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008261  CPF_0167  large-conductance mechanosensitive channel  52.38 
 
 
152 aa  127  6e-29  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009714  CHAB381_1381  large conductance mechanosensitive channel protein  48.15 
 
 
132 aa  127  6e-29  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0848  large-conductance mechanosensitive channel  51.49 
 
 
137 aa  127  7.000000000000001e-29  Methylibium petroleiphilum PM1  Bacteria  normal  0.231503  normal  0.69291 
 
 
-
 
NC_008686  Pden_2265  large conductance mechanosensitive channel protein  51.02 
 
 
145 aa  126  8.000000000000001e-29  Paracoccus denitrificans PD1222  Bacteria  normal  0.898824  normal  0.534464 
 
 
-
 
NC_002939  GSU2794  large-conductance mechanosensitive channel  52.46 
 
 
143 aa  126  1.0000000000000001e-28  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1262  large conductance mechanosensitive channel protein  49.61 
 
 
148 aa  126  1.0000000000000001e-28  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5262  large-conductance mechanosensitive channel  46.81 
 
 
143 aa  125  2.0000000000000002e-28  Burkholderia sp. 383  Bacteria  normal  0.0455479  normal  0.24364 
 
 
-
 
NC_011365  Gdia_3512  large conductance mechanosensitive channel protein  50 
 
 
154 aa  125  2.0000000000000002e-28  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.178106  normal  0.287508 
 
 
-
 
NC_008062  Bcen_6128  large-conductance mechanosensitive channel  46.81 
 
 
143 aa  125  2.0000000000000002e-28  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.316261  n/a   
 
 
-
 
NC_008542  Bcen2424_1951  large-conductance mechanosensitive channel  46.81 
 
 
143 aa  125  2.0000000000000002e-28  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1975  large-conductance mechanosensitive channel  46.81 
 
 
143 aa  124  3e-28  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0443039 
 
 
-
 
NC_008390  Bamb_1938  large-conductance mechanosensitive channel  46.81 
 
 
143 aa  124  3e-28  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1865  large-conductance mechanosensitive channel  46.81 
 
 
143 aa  124  3e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  0.568071  hitchhiker  0.00372648 
 
 
-
 
NC_007347  Reut_A3094  large-conductance mechanosensitive channel  49.29 
 
 
144 aa  124  4.0000000000000003e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.350384  n/a   
 
 
-
 
NC_009715  CCV52592_0437  large-conductance mechanosensitive channel  50.75 
 
 
133 aa  124  5e-28  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.000628379  n/a   
 
 
-
 
NC_009719  Plav_0712  large-conductance mechanosensitive channel  50.35 
 
 
142 aa  122  1e-27  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.268263  normal 
 
 
-
 
NC_012912  Dd1591_0352  large conductance mechanosensitive channel protein  47.45 
 
 
141 aa  122  2e-27  Dickeya zeae Ech1591  Bacteria  normal  0.559193  n/a   
 
 
-
 
NC_010002  Daci_5504  large-conductance mechanosensitive channel  47.14 
 
 
142 aa  122  2e-27  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.215904 
 
 
-
 
NC_013061  Phep_1538  large conductance mechanosensitive channel protein  47.14 
 
 
143 aa  122  2e-27  Pedobacter heparinus DSM 2366  Bacteria  normal  0.580363  normal  0.302083 
 
 
-
 
NC_009484  Acry_1343  large conductance mechanosensitive channel protein  48.91 
 
 
152 aa  121  3e-27  Acidiphilium cryptum JF-5  Bacteria  normal  0.954232  n/a   
 
 
-
 
NC_008048  Sala_0992  large-conductance mechanosensitive channel  48.57 
 
 
140 aa  121  3e-27  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.158656  normal 
 
 
-
 
NC_010084  Bmul_1318  large-conductance mechanosensitive channel  47.52 
 
 
143 aa  121  4e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.212571  hitchhiker  0.00243459 
 
 
-
 
NC_007404  Tbd_2455  large-conductance mechanosensitive channel  48.91 
 
 
141 aa  120  5e-27  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2428  large conductance mechanosensitive channel protein  44.53 
 
 
142 aa  120  7e-27  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2522  large-conductance mechanosensitive channel  49.18 
 
 
145 aa  120  8e-27  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00000000515588  normal  0.121482 
 
 
-
 
NC_007005  Psyr_4276  large-conductance mechanosensitive channel  48.18 
 
 
148 aa  119  9.999999999999999e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.348387  normal 
 
 
-
 
NC_013501  Rmar_0647  large conductance mechanosensitive channel protein  51.8 
 
 
144 aa  119  9.999999999999999e-27  Rhodothermus marinus DSM 4252  Bacteria  normal  0.409185  n/a   
 
 
-
 
NC_007298  Daro_3333  large-conductance mechanosensitive channel  46.76 
 
 
141 aa  118  1.9999999999999998e-26  Dechloromonas aromatica RCB  Bacteria  normal  0.662595  hitchhiker  0.000286923 
 
 
-
 
NC_007794  Saro_0880  large-conductance mechanosensitive channel  47.55 
 
 
155 aa  119  1.9999999999999998e-26  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.0911634  n/a   
 
 
-
 
NC_007908  Rfer_2963  large conductance mechanosensitive channel protein  47.14 
 
 
142 aa  119  1.9999999999999998e-26  Rhodoferax ferrireducens T118  Bacteria  normal  0.232112  n/a   
 
 
-
 
NC_007951  Bxe_A2316  large-conductance mechanosensitive channel  48.23 
 
 
148 aa  119  1.9999999999999998e-26  Burkholderia xenovorans LB400  Bacteria  normal  0.0475958  normal  0.500244 
 
 
-
 
NC_012791  Vapar_1187  large conductance mechanosensitive channel protein  50.71 
 
 
143 aa  118  3e-26  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4641  large conductance mechanosensitive channel protein  49.25 
 
 
148 aa  118  3e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2162  large-conductance mechanosensitive channel  47.48 
 
 
126 aa  118  3e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008346  Swol_1671  large conductance mechanosensitive channel protein  49.25 
 
 
150 aa  118  3e-26  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.0394869  n/a   
 
 
-
 
NC_010681  Bphyt_1871  large-conductance mechanosensitive channel  49.65 
 
 
148 aa  118  3e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0110608  normal  0.0250819 
 
 
-
 
NC_002947  PP_4645  large-conductance mechanosensitive channel  48.51 
 
 
139 aa  117  3.9999999999999996e-26  Pseudomonas putida KT2440  Bacteria  normal  normal  0.51742 
 
 
-
 
NC_012560  Avin_41090  large-conductance mechanosensitive channel  47.45 
 
 
136 aa  117  3.9999999999999996e-26  Azotobacter vinelandii DJ  Bacteria  normal  0.629414  n/a   
 
 
-
 
NC_012793  GWCH70_1285  large-conductance mechanosensitive channel  45 
 
 
131 aa  117  6e-26  Geobacillus sp. WCH70  Bacteria  unclonable  0.00000000000347005  n/a   
 
 
-
 
NC_010322  PputGB1_4639  large-conductance mechanosensitive channel  47.76 
 
 
139 aa  117  7e-26  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4507  large-conductance mechanosensitive channel  47.76 
 
 
139 aa  115  9.999999999999999e-26  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_3196  large-conductance mechanosensitive channel  50 
 
 
134 aa  116  9.999999999999999e-26  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.977942  normal 
 
 
-
 
NC_008463  PA14_61050  large-conductance mechanosensitive channel  45.52 
 
 
137 aa  115  9.999999999999999e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0124  large conductance mechanosensitive channel protein  47.83 
 
 
140 aa  116  9.999999999999999e-26  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.533935  n/a   
 
 
-
 
NC_013132  Cpin_0386  large conductance mechanosensitive channel protein  44.29 
 
 
143 aa  115  1.9999999999999998e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.242536 
 
 
-
 
NC_012880  Dd703_0435  large conductance mechanosensitive channel protein  44.53 
 
 
135 aa  115  1.9999999999999998e-25  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0751  large-conductance mechanosensitive channel  47.83 
 
 
142 aa  115  1.9999999999999998e-25  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3339  large-conductance mechanosensitive channel  47.76 
 
 
136 aa  115  1.9999999999999998e-25  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008309  HS_0037  large-conductance mechanosensitive channel  46.67 
 
 
131 aa  115  1.9999999999999998e-25  Haemophilus somnus 129PT  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5255  large-conductance mechanosensitive channel  45.52 
 
 
137 aa  115  1.9999999999999998e-25  Pseudomonas aeruginosa PA7  Bacteria  normal  0.861371  n/a   
 
 
-
 
NC_009524  PsycPRwf_0381  large-conductance mechanosensitive channel  53.51 
 
 
143 aa  115  1.9999999999999998e-25  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.000132352  hitchhiker  0.000000656046 
 
 
-
 
NC_008782  Ajs_0788  large-conductance mechanosensitive channel  47.83 
 
 
142 aa  115  1.9999999999999998e-25  Acidovorax sp. JS42  Bacteria  normal  normal  0.112062 
 
 
-
 
NC_009456  VC0395_0554  large-conductance mechanosensitive channel  48.91 
 
 
136 aa  115  1.9999999999999998e-25  Vibrio cholerae O395  Bacteria  hitchhiker  0.000110723  n/a   
 
 
-
 
NC_007492  Pfl01_4887  large-conductance mechanosensitive channel  47.01 
 
 
154 aa  115  3e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0520  large-conductance mechanosensitive channel  48.51 
 
 
136 aa  114  3e-25  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3697  large-conductance mechanosensitive channel  49.64 
 
 
143 aa  115  3e-25  Acidovorax citrulli AAC00-1  Bacteria  normal  0.93238  normal  0.982216 
 
 
-
 
NC_011059  Paes_1626  large conductance mechanosensitive channel protein  41.91 
 
 
134 aa  114  3.9999999999999997e-25  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000392194  normal 
 
 
-
 
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