14 homologs were found in PanDaTox collection
for query gene Msil_2060 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011666  Msil_2060  photosynthetic reaction centre cytochrome c subunit  100 
 
 		 338 aa  712    Methylocella silvestris BL2  Bacteria  n/a    decreased coverage  0.00647835 
 
 
-
 
NC_010511  M446_3705  photosynthetic reaction center cytochrome c subunit  53.42 
 
 		 345 aa  359  5e-98  Methylobacterium sp. 4-46  Bacteria  normal  0.265729  hitchhiker  0.00384801 
 
 
-
 
NC_010725  Mpop_2860  photosynthetic reaction centre cytochrome c subunit  50.15 
 
 		 366 aa  336  2.9999999999999997e-91  Methylobacterium populi BJ001  Bacteria  normal  0.838439  normal  1 
 
 
-
 
NC_010172  Mext_2738  photosynthetic reaction center cytochrome c subunit  49.42 
 
 		 369 aa  333  4e-90  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_2810  photosynthetic reaction center cytochrome c subunit  50.88 
 
 		 367 aa  331  1e-89  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.776838  normal  0.69039 
 
 
-
 
NC_008789  Hhal_1603  photosynthetic reaction center subunit cytochrome c  42.73 
 
 		 362 aa  284  1.0000000000000001e-75  Halorhodospira halophila SL1  Bacteria  normal  0.199827  n/a   
 
 
-
 
NC_007802  Jann_0171  photosynthetic reaction center cytochrome c subunit  42.2 
 
 		 414 aa  232  6e-60  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_3525  photosynthetic reaction center cytochrome c subunit precursor  38.61 
 
 		 360 aa  187  3e-46  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.285625  normal  1 
 
 
-
 
NC_011831  Cagg_2631  hypothetical protein  27.61 
 
 		 414 aa  75.9  0.0000000000009  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.906606  normal  1 
 
 
-
 
NC_009767  Rcas_3753  hypothetical protein  25.52 
 
 		 320 aa  73.2  0.000000000005  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.016122  hitchhiker  0.00153118 
 
 
-
 
NC_009523  RoseRS_3267  hypothetical protein  25.52 
 
 		 320 aa  72  0.00000000001  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0462679 
 
 
-
 
NC_013132  Cpin_6804  hypothetical protein  35.45 
 
 		 142 aa  57.4  0.0000003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0100137  hitchhiker  0.000000165642 
 
 
-
 
NC_008009  Acid345_2503  hypothetical protein  32.22 
 
 		 379 aa  52  0.00001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.490414 
 
 
-
 
NC_013061  Phep_2738  hypothetical protein  32 
 
 		 132 aa  50.8  0.00003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.397196  normal  1 
 
 
-
 
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