More than 300 homologs were found in PanDaTox collection
for query gene Msil_1153 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011666  Msil_1153  Indole-3-glycerol-phosphate synthase  100 
 
 
281 aa  559  1e-158  Methylocella silvestris BL2  Bacteria  n/a    decreased coverage  0.000666222 
 
 
-
 
NC_010581  Bind_1560  indole-3-glycerol-phosphate synthase  67.03 
 
 
280 aa  384  1e-106  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.627626  normal  0.76351 
 
 
-
 
NC_009720  Xaut_4302  indole-3-glycerol-phosphate synthase  44.02 
 
 
283 aa  209  3e-53  Xanthobacter autotrophicus Py2  Bacteria  normal  0.62403  normal 
 
 
-
 
NC_009484  Acry_1232  indole-3-glycerol-phosphate synthase  36.54 
 
 
270 aa  150  2e-35  Acidiphilium cryptum JF-5  Bacteria  normal  0.0182595  n/a   
 
 
-
 
NC_009012  Cthe_0872  indole-3-glycerol-phosphate synthase  36.59 
 
 
260 aa  144  2e-33  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.169431  n/a   
 
 
-
 
NC_009483  Gura_1734  indole-3-glycerol-phosphate synthase  42.06 
 
 
268 aa  142  7e-33  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_12880  indole-3-glycerol phosphate synthase  42.36 
 
 
273 aa  141  9.999999999999999e-33  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.315308  normal  0.0294244 
 
 
-
 
NC_007484  Noc_2497  indole-3-glycerol-phosphate synthase  35.11 
 
 
271 aa  139  3.9999999999999997e-32  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0317819  n/a   
 
 
-
 
NC_013422  Hneap_2048  Indole-3-glycerol-phosphate synthase  35.5 
 
 
269 aa  137  1e-31  Halothiobacillus neapolitanus c2  Bacteria  normal  0.0288886  n/a   
 
 
-
 
NC_012918  GM21_2259  indole-3-glycerol-phosphate synthase  34.87 
 
 
266 aa  137  2e-31  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_2494  indole-3-glycerol-phosphate synthase  34.87 
 
 
266 aa  137  3.0000000000000003e-31  Geobacter metallireducens GS-15  Bacteria  normal  0.141997  normal 
 
 
-
 
NC_002939  GSU2380  indole-3-glycerol-phosphate synthase  35.63 
 
 
266 aa  136  5e-31  Geobacter sulfurreducens PCA  Bacteria  normal  0.446118  n/a   
 
 
-
 
NC_008825  Mpe_A3460  indole-3-glycerol phosphate synthase  35.5 
 
 
267 aa  135  5e-31  Methylibium petroleiphilum PM1  Bacteria  normal  0.860463  normal  0.18397 
 
 
-
 
NC_011146  Gbem_1957  indole-3-glycerol-phosphate synthase  34.1 
 
 
266 aa  135  6.0000000000000005e-31  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3649  indole-3-glycerol-phosphate synthase  37.44 
 
 
263 aa  135  9.999999999999999e-31  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2079  indole-3-glycerol-phosphate synthase  36.78 
 
 
272 aa  135  9.999999999999999e-31  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1566  indole-3-glycerol-phosphate synthase  38.97 
 
 
263 aa  134  9.999999999999999e-31  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4451  indole-3-glycerol-phosphate synthase  37.85 
 
 
264 aa  134  9.999999999999999e-31  Polaromonas sp. JS666  Bacteria  normal  0.0983396  normal 
 
 
-
 
NC_013889  TK90_2358  Indole-3-glycerol-phosphate synthase  34.75 
 
 
268 aa  134  1.9999999999999998e-30  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1063  indole-3-glycerol-phosphate synthase  37.44 
 
 
271 aa  133  3e-30  Marinomonas sp. MWYL1  Bacteria  normal  0.493253  normal  0.0834035 
 
 
-
 
NC_007512  Plut_1650  indole-3-glycerol-phosphate synthase  36.36 
 
 
262 aa  133  3e-30  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1866  indole-3-glycerol-phosphate synthase  38.86 
 
 
260 aa  133  3.9999999999999996e-30  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2195  Indole-3-glycerol-phosphate synthase  33.47 
 
 
273 aa  132  6.999999999999999e-30  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.228441  n/a   
 
 
-
 
NC_010505  Mrad2831_3099  indole-3-glycerol-phosphate synthase  35.39 
 
 
295 aa  131  1.0000000000000001e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET1484  indole-3-glycerol-phosphate synthase  36.67 
 
 
259 aa  130  2.0000000000000002e-29  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_1274  indole-3-glycerol-phosphate synthase  36.67 
 
 
259 aa  130  2.0000000000000002e-29  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0711  indole-3-glycerol-phosphate synthase  34.1 
 
 
267 aa  131  2.0000000000000002e-29  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_3172  indole-3-glycerol-phosphate synthase  38.99 
 
 
286 aa  129  8.000000000000001e-29  Salinispora tropica CNB-440  Bacteria  normal  normal  0.291676 
 
 
-
 
NC_010814  Glov_2484  indole-3-glycerol-phosphate synthase  34.67 
 
 
266 aa  128  1.0000000000000001e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3718  indole-3-glycerol-phosphate synthase  35.14 
 
 
264 aa  128  1.0000000000000001e-28  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0881817  normal 
 
 
-
 
NC_010531  Pnec_0159  indole-3-glycerol-phosphate synthase  37.38 
 
 
267 aa  127  2.0000000000000002e-28  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.927898  normal 
 
 
-
 
NC_007908  Rfer_3601  indole-3-glycerol-phosphate synthase  36.84 
 
 
264 aa  126  3e-28  Rhodoferax ferrireducens T118  Bacteria  normal  0.147374  n/a   
 
 
-
 
NC_008009  Acid345_1156  indole-3-glycerol phosphate synthase  39.04 
 
 
260 aa  127  3e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.721483  normal 
 
 
-
 
NC_009656  PSPA7_0792  indole-3-glycerol-phosphate synthase  36.26 
 
 
278 aa  126  4.0000000000000003e-28  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3582  Indole-3-glycerol-phosphate synthase  37.93 
 
 
263 aa  126  4.0000000000000003e-28  Haliangium ochraceum DSM 14365  Bacteria  normal  0.433048  normal  0.034535 
 
 
-
 
NC_012560  Avin_46110  indole-3-glycerol-phosphate synthase  36.16 
 
 
266 aa  126  5e-28  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_1254  Indole-3-glycerol phosphate synthase  36.19 
 
 
259 aa  126  5e-28  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0754  indole-3-glycerol phosphate synthase  34.82 
 
 
265 aa  125  5e-28  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.297551 
 
 
-
 
NC_008254  Meso_1639  indole-3-glycerol phosphate synthase  36.8 
 
 
271 aa  125  5e-28  Chelativorans sp. BNC1  Bacteria  normal  0.189756  n/a   
 
 
-
 
NC_009953  Sare_3397  indole-3-glycerol-phosphate synthase  38.12 
 
 
267 aa  126  5e-28  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_007513  Syncc9902_1529  indole-3-glycerol-phosphate synthase  34.57 
 
 
294 aa  125  6e-28  Synechococcus sp. CC9902  Bacteria  normal  0.260745  n/a   
 
 
-
 
NC_013501  Rmar_1047  Indole-3-glycerol-phosphate synthase  36.97 
 
 
273 aa  125  7e-28  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_5212  Indole-3-glycerol-phosphate synthase  34.57 
 
 
285 aa  125  7e-28  Methylobacterium populi BJ001  Bacteria  normal  0.69886  normal 
 
 
-
 
NC_011761  AFE_3242  indole-3-glycerol phosphate synthase  32.43 
 
 
263 aa  125  8.000000000000001e-28  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.857016  n/a   
 
 
-
 
NC_011206  Lferr_2843  Indole-3-glycerol-phosphate synthase  32.43 
 
 
263 aa  125  8.000000000000001e-28  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  hitchhiker  0.00184612  normal 
 
 
-
 
NC_011901  Tgr7_2798  Indole-3-glycerol-phosphate synthase  36.32 
 
 
265 aa  125  9e-28  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.822714  n/a   
 
 
-
 
NC_003296  RSp0680  indole-3-glycerol phosphate synthase protein  34.3 
 
 
268 aa  124  2e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  0.694431  normal  0.104573 
 
 
-
 
NC_013159  Svir_28110  indole-3-glycerol-phosphate synthase  38.97 
 
 
269 aa  124  2e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0145  indole-3-glycerol-phosphate synthase  35.98 
 
 
267 aa  124  2e-27  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.694484  n/a   
 
 
-
 
NC_003912  CJE0606  indole-3-glycerol-phosphate synthase  33.33 
 
 
258 aa  123  4e-27  Campylobacter jejuni RM1221  Bacteria  normal  0.64209  n/a   
 
 
-
 
NC_013525  Tter_1251  Indole-3-glycerol-phosphate synthase  34.67 
 
 
270 aa  123  4e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011666  Msil_0503  Indole-3-glycerol-phosphate synthase  33.58 
 
 
276 aa  122  5e-27  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010338  Caul_2778  indole-3-glycerol-phosphate synthase  35.5 
 
 
262 aa  122  5e-27  Caulobacter sp. K31  Bacteria  hitchhiker  0.000331448  hitchhiker  0.0000255859 
 
 
-
 
NC_014248  Aazo_0100  Indole-3-glycerol-phosphate synthase  30.94 
 
 
294 aa  122  5e-27  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0519  indole-3-glycerol-phosphate synthase  33.33 
 
 
258 aa  122  5e-27  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3067  indole-3-glycerol-phosphate synthase  38.79 
 
 
272 aa  122  6e-27  Mycobacterium sp. JLS  Bacteria  normal  0.285409  normal  0.207369 
 
 
-
 
NC_008146  Mmcs_3051  indole-3-glycerol-phosphate synthase  38.79 
 
 
272 aa  122  6e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3110  indole-3-glycerol-phosphate synthase  38.79 
 
 
272 aa  122  6e-27  Mycobacterium sp. KMS  Bacteria  normal  0.475678  normal 
 
 
-
 
NC_007577  PMT9312_1393  indole-3-glycerol-phosphate synthase  34.4 
 
 
295 aa  122  7e-27  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3520  indole-3-glycerol-phosphate synthase  31.15 
 
 
270 aa  122  7e-27  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1773  indole-3-glycerol-phosphate synthase  34.35 
 
 
265 aa  122  7e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.908281  normal 
 
 
-
 
NC_013441  Gbro_2948  Indole-3-glycerol-phosphate synthase  38.32 
 
 
272 aa  122  8e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  0.544839  n/a   
 
 
-
 
NC_005945  BAS1159  indole-3-glycerol-phosphate synthase  36.6 
 
 
253 aa  122  8e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1139  indole-3-glycerol-phosphate synthase  36.6 
 
 
253 aa  122  8e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1319  indole-3-glycerol-phosphate synthase  36.6 
 
 
253 aa  122  8e-27  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000247169 
 
 
-
 
NC_007530  GBAA_1251  indole-3-glycerol-phosphate synthase  36.6 
 
 
253 aa  122  8e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.449092  n/a   
 
 
-
 
NC_013947  Snas_2509  Indole-3-glycerol-phosphate synthase  36.45 
 
 
269 aa  122  8e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.69466  normal 
 
 
-
 
NC_007520  Tcr_0269  indole-3-glycerol-phosphate synthase  36.49 
 
 
268 aa  122  9e-27  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.00000000000502728  n/a   
 
 
-
 
NC_008463  PA14_08360  indole-3-glycerol-phosphate synthase  35.53 
 
 
278 aa  122  9e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00000387982 
 
 
-
 
NC_011772  BCG9842_B4050  indole-3-glycerol-phosphate synthase  31.52 
 
 
253 aa  121  9.999999999999999e-27  Bacillus cereus G9842  Bacteria  normal  0.752553  normal 
 
 
-
 
NC_010581  Bind_1416  indole-3-glycerol-phosphate synthase  35.47 
 
 
278 aa  121  9.999999999999999e-27  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_06390  indole-3-glycerol phosphate synthase  34.23 
 
 
260 aa  121  9.999999999999999e-27  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2332  indole-3-glycerol phosphate synthase  34.6 
 
 
268 aa  121  9.999999999999999e-27  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK1133  indole-3-glycerol-phosphate synthase  36.08 
 
 
253 aa  120  1.9999999999999998e-26  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A3026  indole-3-glycerol-phosphate synthase  35.09 
 
 
267 aa  120  1.9999999999999998e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.0114163  n/a   
 
 
-
 
NC_007643  Rru_A1897  indole-3-glycerol phosphate synthase  34.1 
 
 
263 aa  120  1.9999999999999998e-26  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.995297  n/a   
 
 
-
 
NC_010172  Mext_4672  indole-3-glycerol-phosphate synthase  33.33 
 
 
285 aa  120  1.9999999999999998e-26  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5576  Indole-3-glycerol phosphate synthase  32.14 
 
 
288 aa  120  1.9999999999999998e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.513944  n/a   
 
 
-
 
NC_011658  BCAH187_A1396  indole-3-glycerol-phosphate synthase  36.08 
 
 
253 aa  120  3e-26  Bacillus cereus AH187  Bacteria  normal  0.0114695  n/a   
 
 
-
 
NC_011757  Mchl_5135  Indole-3-glycerol-phosphate synthase  33.74 
 
 
285 aa  120  3e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0596485 
 
 
-
 
NC_009707  JJD26997_1436  indole-3-glycerol-phosphate synthase  32.85 
 
 
258 aa  120  3e-26  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.567597  n/a   
 
 
-
 
NC_009360  OSTLU_32358  predicted protein  31.4 
 
 
355 aa  120  3e-26  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  0.125229  normal 
 
 
-
 
NC_010511  M446_5394  indole-3-glycerol-phosphate synthase  32.81 
 
 
285 aa  120  3e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.467387  normal  0.310018 
 
 
-
 
NC_009921  Franean1_1931  indole-3-glycerol-phosphate synthase  38.43 
 
 
268 aa  119  3.9999999999999996e-26  Frankia sp. EAN1pec  Bacteria  normal  normal  0.535725 
 
 
-
 
NC_009667  Oant_2048  indole-3-glycerol-phosphate synthase  34.36 
 
 
266 aa  119  3.9999999999999996e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_3216  indole-3-glycerol-phosphate synthase  33.2 
 
 
260 aa  119  3.9999999999999996e-26  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2465  indole-3-glycerol phosphate synthase  30.4 
 
 
271 aa  119  3.9999999999999996e-26  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0579  Indole-3-glycerol-phosphate synthase  35.22 
 
 
266 aa  120  3.9999999999999996e-26  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2701  indole-3-glycerol-phosphate synthase  38.42 
 
 
261 aa  119  3.9999999999999996e-26  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A3621  indole-3-glycerol phosphate synthase  37.16 
 
 
268 aa  119  6e-26  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_010002  Daci_0770  indole-3-glycerol-phosphate synthase  35.02 
 
 
267 aa  119  6e-26  Delftia acidovorans SPH-1  Bacteria  normal  0.383206  normal 
 
 
-
 
NC_010513  Xfasm12_0182  indole-3-glycerol-phosphate synthase  33.21 
 
 
264 aa  119  7.999999999999999e-26  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_008816  A9601_14961  indole-3-glycerol-phosphate synthase  33.64 
 
 
295 aa  119  7.999999999999999e-26  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.147831  n/a   
 
 
-
 
NC_004578  PSPTO_0594  indole-3-glycerol phosphate synthase  32.69 
 
 
278 aa  118  7.999999999999999e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_1952  indole-3-glycerol-phosphate synthase  34.34 
 
 
261 aa  119  7.999999999999999e-26  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.0048932  n/a   
 
 
-
 
NC_010577  XfasM23_0160  indole-3-glycerol-phosphate synthase  33.59 
 
 
264 aa  118  7.999999999999999e-26  Xylella fastidiosa M23  Bacteria  normal  0.286588  n/a   
 
 
-
 
NC_007492  Pfl01_5113  indole-3-glycerol-phosphate synthase  33.46 
 
 
278 aa  118  9e-26  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0733  indole-3-glycerol-phosphate synthase  34.73 
 
 
266 aa  118  9e-26  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4375  indole-3-glycerol-phosphate synthase  32.82 
 
 
263 aa  117  9.999999999999999e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  0.893043  normal 
 
 
-
 
NC_010717  PXO_04004  indole-3-glycerol-phosphate synthase  37.91 
 
 
265 aa  118  9.999999999999999e-26  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
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