More than 300 homologs were found in PanDaTox collection
for query gene Mrad2831_5013 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_5013  cyclic nucleotide-binding protein  100 
 
 
147 aa  288  2e-77  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.32822  normal  0.191008 
 
 
-
 
NC_011757  Mchl_3122  cyclic nucleotide-binding protein  82.31 
 
 
149 aa  234  3e-61  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.196103 
 
 
-
 
NC_010725  Mpop_3019  cyclic nucleotide-binding protein  80.95 
 
 
149 aa  234  4e-61  Methylobacterium populi BJ001  Bacteria  normal  0.852704  normal 
 
 
-
 
NC_010172  Mext_2896  cyclic nucleotide-binding  82.31 
 
 
194 aa  233  6e-61  Methylobacterium extorquens PA1  Bacteria  normal  0.633977  normal 
 
 
-
 
NC_011894  Mnod_4405  cyclic nucleotide-binding protein  76.03 
 
 
148 aa  221  2e-57  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2719  cyclic nucleotide-binding protein  73.29 
 
 
151 aa  212  9.999999999999999e-55  Methylobacterium sp. 4-46  Bacteria  normal  0.460468  normal  0.384505 
 
 
-
 
NC_009620  Smed_4601  cyclic nucleotide-binding protein  48.98 
 
 
154 aa  145  1.0000000000000001e-34  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.930738 
 
 
-
 
NC_011366  Rleg2_5981  cyclic nucleotide-binding protein  47.62 
 
 
155 aa  143  1e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_7131  putative transcriptional regulator, Crp/Fnr family  46.94 
 
 
155 aa  140  5e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.331754 
 
 
-
 
NC_011988  Avi_5607  cAMP-dependent protein kinase regulatory subunit  46.26 
 
 
154 aa  136  8.999999999999999e-32  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1892  cyclic nucleotide-binding protein  41.5 
 
 
147 aa  127  4.0000000000000003e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  0.326195  normal 
 
 
-
 
NC_011989  Avi_3942  cAMP-dependent protein kinase regulatory subunit  38.36 
 
 
154 aa  106  1e-22  Agrobacterium vitis S4  Bacteria  normal  0.644852  n/a   
 
 
-
 
NC_004310  BR2005  cyclic nucleotide-binding protein  34.65 
 
 
153 aa  83.6  8e-16  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1928  cyclic nucleotide-binding protein  34.65 
 
 
153 aa  83.6  8e-16  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4167  cyclic nucleotide-binding protein  34.59 
 
 
570 aa  83.2  0.000000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1291  cyclic nucleotide-binding protein  33.54 
 
 
164 aa  81.6  0.000000000000003  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.234039  normal 
 
 
-
 
NC_009667  Oant_0964  cyclic nucleotide-binding protein  31.5 
 
 
152 aa  78.2  0.00000000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5745  transcriptional regulator  32.59 
 
 
243 aa  76.6  0.0000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.810963  normal 
 
 
-
 
NC_013037  Dfer_1108  putative transcriptional regulator, Crp/Fnr family  30.83 
 
 
1075 aa  73.6  0.0000000000008  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.000733786  normal  0.267995 
 
 
-
 
NC_011884  Cyan7425_0841  cyclic nucleotide-binding protein  33.59 
 
 
160 aa  73.6  0.0000000000008  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.108052 
 
 
-
 
NC_011831  Cagg_2419  cyclic nucleotide-binding protein  31.16 
 
 
563 aa  73.2  0.000000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.871595  normal 
 
 
-
 
NC_011661  Dtur_1814  transcriptional regulator, Crp/Fnr family  32.09 
 
 
225 aa  72.8  0.000000000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_4388  CRP/FNR family transcriptional regulator  36.03 
 
 
225 aa  73.2  0.000000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3425  cyclic nucleotide-binding protein  34.06 
 
 
151 aa  73.2  0.000000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1772  cyclic nucleotide-binding protein  31.29 
 
 
161 aa  71.6  0.000000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0691544 
 
 
-
 
NC_011884  Cyan7425_0840  cyclic nucleotide-binding protein  34.07 
 
 
350 aa  71.2  0.000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.126759 
 
 
-
 
NC_009972  Haur_0049  Crp/FNR family transcriptional regulator  34.69 
 
 
252 aa  71.2  0.000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.422683  n/a   
 
 
-
 
NC_007925  RPC_0279  cyclic nucleotide-binding domain-containing protein  32.84 
 
 
149 aa  71.2  0.000000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.294504 
 
 
-
 
NC_009636  Smed_3055  cyclic nucleotide-binding protein  31.2 
 
 
151 aa  70.9  0.000000000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.517471  normal 
 
 
-
 
NC_012850  Rleg_4089  putative transcriptional regulator, Crp/Fnr family  32.79 
 
 
151 aa  70.1  0.000000000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.998394  normal 
 
 
-
 
NC_011369  Rleg2_3764  cyclic nucleotide-binding protein  32.79 
 
 
151 aa  69.7  0.00000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1066  transcriptional regulator, Crp/Fnr family  30.94 
 
 
225 aa  69.7  0.00000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3368  putative transcriptional regulator, Crp/Fnr family  34.88 
 
 
503 aa  69.3  0.00000000002  Haliangium ochraceum DSM 14365  Bacteria  decreased coverage  0.00879958  normal  0.135189 
 
 
-
 
NC_007298  Daro_1294  cyclic nucleotide-binding: regulatory protein, Crp  32.84 
 
 
220 aa  68.2  0.00000000004  Dechloromonas aromatica RCB  Bacteria  normal  0.957461  normal  0.413121 
 
 
-
 
NC_008554  Sfum_3249  cyclic nucleotide-binding protein  27.08 
 
 
171 aa  67.8  0.00000000004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3176  transcriptional regulator, Crp/Fnr family  33.57 
 
 
225 aa  67  0.00000000007  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.231761 
 
 
-
 
NC_008541  Arth_3395  Crp/FNR family transcriptional regulator  33.57 
 
 
225 aa  66.6  0.0000000001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0144  cyclic nucleotide-binding domain-containing protein  32.86 
 
 
227 aa  65.9  0.0000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  0.993696  normal 
 
 
-
 
NC_011666  Msil_0331  cyclic nucleotide-binding protein  31.97 
 
 
150 aa  65.5  0.0000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0211845 
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  29.93 
 
 
219 aa  65.1  0.0000000003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_011662  Tmz1t_1763  transcriptional regulator, Crp/Fnr family  33.79 
 
 
223 aa  65.1  0.0000000003  Thauera sp. MZ1T  Bacteria  normal  0.796832  n/a   
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  30.66 
 
 
224 aa  65.1  0.0000000003  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_013093  Amir_0253  transcriptional regulator, Crp/Fnr family  35.04 
 
 
224 aa  65.1  0.0000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_1037  cyclic nucleotide-binding protein  34.38 
 
 
227 aa  65.1  0.0000000003  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.272663 
 
 
-
 
NC_009439  Pmen_0998  cyclic nucleotide-binding protein  30.36 
 
 
265 aa  65.1  0.0000000003  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00000000222196  unclonable  1.0277600000000001e-18 
 
 
-
 
NC_013440  Hoch_6804  putative transcriptional regulator, Crp/Fnr family  32.41 
 
 
238 aa  64.7  0.0000000004  Haliangium ochraceum DSM 14365  Bacteria  normal  0.743669  normal  0.223692 
 
 
-
 
NC_007406  Nwi_0086  cyclic nucleotide-binding protein  30.94 
 
 
160 aa  64.7  0.0000000004  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.929528  normal  0.0740226 
 
 
-
 
NC_008312  Tery_2905  cyclic nucleotide-binding protein  29.32 
 
 
157 aa  64.7  0.0000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0600936 
 
 
-
 
NC_007964  Nham_0093  cyclic nucleotide-binding domain-containing protein  33.09 
 
 
149 aa  64.3  0.0000000005  Nitrobacter hamburgensis X14  Bacteria  normal  0.132878  n/a   
 
 
-
 
NC_012803  Mlut_18280  cAMP-binding protein  32.17 
 
 
225 aa  64.3  0.0000000005  Micrococcus luteus NCTC 2665  Bacteria  normal  0.186071  n/a   
 
 
-
 
NC_009720  Xaut_2796  cyclic nucleotide-binding protein  33.09 
 
 
453 aa  62.8  0.000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.180681  normal  0.733886 
 
 
-
 
NC_014211  Ndas_5315  transcriptional regulator, Crp/Fnr family  29.71 
 
 
228 aa  63.2  0.000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.527594 
 
 
-
 
NC_010505  Mrad2831_4104  cyclic nucleotide-binding protein  32.84 
 
 
163 aa  63.2  0.000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.374225 
 
 
-
 
NC_011884  Cyan7425_4893  cyclic nucleotide-binding protein  33.07 
 
 
237 aa  63.2  0.000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3460  cyclic nucleotide-binding domain-containing protein  37.61 
 
 
644 aa  62.8  0.000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1016  cyclic nucleotide-binding protein  34.43 
 
 
149 aa  62.4  0.000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1598  hypothetical protein  36.36 
 
 
407 aa  62.8  0.000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.303519  n/a   
 
 
-
 
NC_013510  Tcur_4850  transcriptional regulator, Crp/Fnr family  27.46 
 
 
228 aa  61.6  0.000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_36130  cAMP-binding protein  33.58 
 
 
224 aa  61.6  0.000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.758224 
 
 
-
 
NC_009664  Krad_0424  putative transcriptional regulator, Crp/Fnr family  30.15 
 
 
242 aa  62  0.000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.24952 
 
 
-
 
NC_008043  TM1040_3676  cyclic nucleotide-binding protein  31.34 
 
 
1043 aa  61.6  0.000000003  Ruegeria sp. TM1040  Bacteria  normal  0.88824  normal 
 
 
-
 
NC_009049  Rsph17029_2082  cyclic nucleotide-binding protein  37.5 
 
 
832 aa  61.2  0.000000004  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.584605  normal 
 
 
-
 
NC_012791  Vapar_1284  transcriptional regulator, Crp/Fnr family  28.67 
 
 
224 aa  61.6  0.000000004  Variovorax paradoxus S110  Bacteria  normal  0.304913  n/a   
 
 
-
 
NC_007493  RSP_0426  Na+/H+ antiporter  37.5 
 
 
832 aa  61.2  0.000000004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0468  putative transcriptional regulator, Crp/Fnr family  29.41 
 
 
226 aa  61.6  0.000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.974187 
 
 
-
 
NC_007604  Synpcc7942_1243  cyclic nucleotide-binding domain-containing protein  32.37 
 
 
231 aa  61.6  0.000000004  Synechococcus elongatus PCC 7942  Bacteria  hitchhiker  0.00145976  normal 
 
 
-
 
NC_009656  PSPA7_5420  hypothetical protein  30.36 
 
 
265 aa  61.2  0.000000004  Pseudomonas aeruginosa PA7  Bacteria  hitchhiker  0.00117771  n/a   
 
 
-
 
NC_009565  TBFG_13707  Cpr/FNR family transcriptional regulator  33.82 
 
 
224 aa  61.2  0.000000004  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.0333343 
 
 
-
 
NC_011989  Avi_4229  hypothetical protein  31.25 
 
 
151 aa  61.2  0.000000005  Agrobacterium vitis S4  Bacteria  unclonable  0.000114025  n/a   
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  30.77 
 
 
231 aa  60.8  0.000000006  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_009565  TBFG_13268  transmembrane transport protein  34.31 
 
 
1048 aa  60.8  0.000000006  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.321047 
 
 
-
 
NC_007958  RPD_0441  cyclic nucleotide-binding  31.97 
 
 
148 aa  60.8  0.000000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.309044  normal  0.811617 
 
 
-
 
NC_008463  PA14_62260  hypothetical protein  30.36 
 
 
265 aa  60.8  0.000000006  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000000000000560596  normal  0.205453 
 
 
-
 
NC_009428  Rsph17025_2350  cyclic nucleotide-binding protein  37.96 
 
 
832 aa  60.5  0.000000007  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_0517  transcriptional regulator, Crp/Fnr family  30.88 
 
 
224 aa  60.5  0.000000007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1814  cyclic nucleotide-binding domain-containing protein  34.75 
 
 
242 aa  60.1  0.000000009  Synechococcus elongatus PCC 7942  Bacteria  normal  0.38579  normal  0.245711 
 
 
-
 
NC_002967  TDE1298  cyclic nucleotide binding domain-containing protein  27.74 
 
 
177 aa  60.1  0.00000001  Treponema denticola ATCC 35405  Bacteria  hitchhiker  0.000825589  n/a   
 
 
-
 
NC_014248  Aazo_1954  putative Crp/Fnr family transcriptional regulator  25.19 
 
 
141 aa  60.1  0.00000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4796  cyclic nucleotide-binding (cNMP-bd) protein  32.08 
 
 
263 aa  60.1  0.00000001  Pseudomonas fluorescens Pf0-1  Bacteria  hitchhiker  0.00000000000370555  unclonable  0.0000216721 
 
 
-
 
NC_007778  RPB_0380  cyclic nucleotide-binding domain-containing protein  33.61 
 
 
148 aa  59.7  0.00000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0230  cyclic nucleotide-binding protein  32.82 
 
 
150 aa  60.1  0.00000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.253117  normal  0.331569 
 
 
-
 
NC_010505  Mrad2831_0617  cyclic nucleotide-binding protein  37.76 
 
 
577 aa  58.9  0.00000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.340501  normal 
 
 
-
 
NC_014165  Tbis_0204  Crp/Fnr family transcriptional regulator  28.99 
 
 
226 aa  58.9  0.00000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.0718939  normal 
 
 
-
 
NC_009338  Mflv_1371  CRP/FNR family transcriptional regulator  33.09 
 
 
224 aa  58.9  0.00000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0955358 
 
 
-
 
NC_008009  Acid345_4730  cyclic nucleotide-binding protein  29.93 
 
 
286 aa  58.9  0.00000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.813554  normal  0.722063 
 
 
-
 
NC_013169  Ksed_25400  cAMP-binding protein  34.59 
 
 
225 aa  58.9  0.00000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1169  Crp/FNR family transcriptional regulator  33.04 
 
 
227 aa  59.3  0.00000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.0303416  normal  0.0506186 
 
 
-
 
NC_008554  Sfum_4027  cyclic nucleotide-binding protein  30.94 
 
 
413 aa  59.3  0.00000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3761  putative Crp/Fnr family transcriptional regulator  28.57 
 
 
227 aa  58.9  0.00000002  'Nostoc azollae' 0708  Bacteria  normal  0.0509841  n/a   
 
 
-
 
NC_009565  TBFG_12585  hypothetical protein  30.94 
 
 
583 aa  59.3  0.00000002  Mycobacterium tuberculosis F11  Bacteria  normal  0.274213  normal  0.619754 
 
 
-
 
NC_008726  Mvan_5435  CRP/FNR family transcriptional regulator  33.09 
 
 
224 aa  58.9  0.00000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.397858 
 
 
-
 
NC_008554  Sfum_1513  cyclic nucleotide-binding protein  30.71 
 
 
308 aa  58.5  0.00000003  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.00604424  normal 
 
 
-
 
NC_013235  Namu_0718  transcriptional regulator, Crp/Fnr family  32.85 
 
 
224 aa  58.2  0.00000004  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5205  Crp/FNR family transcriptional regulator  32.35 
 
 
224 aa  57.8  0.00000004  Mycobacterium sp. JLS  Bacteria  normal  0.703662  hitchhiker  0.000819508 
 
 
-
 
NC_007404  Tbd_1570  cyclic nucleotide-binding domain-containing protein  36.63 
 
 
424 aa  58.2  0.00000004  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_2357  transcriptional regulator, Crp/Fnr family  28.23 
 
 
212 aa  57.8  0.00000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3932  transcriptional regulator, Crp/Fnr family  32.35 
 
 
224 aa  58.2  0.00000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.571672  n/a   
 
 
-
 
NC_008146  Mmcs_4818  Crp/FNR family transcriptional regulator  32.35 
 
 
224 aa  57.8  0.00000004  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0952  cyclic nucleotide-binding protein  31.43 
 
 
164 aa  58.2  0.00000004  Magnetococcus sp. MC-1  Bacteria  normal  0.422759  hitchhiker  0.0019689 
 
 
-
 
NC_008705  Mkms_4904  Crp/FNR family transcriptional regulator  32.35 
 
 
224 aa  57.8  0.00000004  Mycobacterium sp. KMS  Bacteria  normal  normal  0.385516 
 
 
-
 
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