269 homologs were found in PanDaTox collection
for query gene Mrad2831_2433 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_2433  Crp/FNR family transcriptional regulator  100 
 
 
247 aa  502  1e-141  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.168738  normal  0.817452 
 
 
-
 
NC_011757  Mchl_3389  transcriptional regulator, Crp/Fnr family  65.99 
 
 
248 aa  340  1e-92  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3832  transcriptional regulator, Crp/Fnr family  54.89 
 
 
245 aa  270  2e-71  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2447  cyclic nucleotide-binding protein  54.35 
 
 
255 aa  242  5e-63  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1991  transcriptional regulator, Crp/Fnr family  50.42 
 
 
249 aa  240  2e-62  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.250977  n/a   
 
 
-
 
NC_010505  Mrad2831_2950  Crp/FNR family transcriptional regulator  46.98 
 
 
250 aa  227  1e-58  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal 
 
 
-
 
NC_011757  Mchl_2990  transcriptional regulator, Crp/Fnr family  45.34 
 
 
244 aa  218  5e-56  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2763  cyclic nucleotide-binding  45.34 
 
 
244 aa  218  6e-56  Methylobacterium extorquens PA1  Bacteria  normal  0.746131  normal 
 
 
-
 
NC_011894  Mnod_1427  putative transcriptional regulator, Crp/Fnr family  46.05 
 
 
267 aa  212  3.9999999999999995e-54  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2886  transcriptional regulator, Crp/Fnr family  44.44 
 
 
244 aa  212  4.9999999999999996e-54  Methylobacterium populi BJ001  Bacteria  normal  0.473656  normal 
 
 
-
 
NC_010511  M446_6209  Crp/FNR family transcriptional regulator  44.44 
 
 
247 aa  210  2e-53  Methylobacterium sp. 4-46  Bacteria  normal  0.0102902  normal  0.673418 
 
 
-
 
NC_009485  BBta_0859  CRP/FNR family transcriptional regulator  44.59 
 
 
234 aa  207  2e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0477074 
 
 
-
 
NC_012850  Rleg_2944  transcriptional regulator, Crp/Fnr family  41.18 
 
 
246 aa  200  1.9999999999999998e-50  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0738845  normal 
 
 
-
 
NC_009485  BBta_4270  CRP/FNR family transcriptional regulator  45.71 
 
 
225 aa  200  1.9999999999999998e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0893417 
 
 
-
 
NC_011894  Mnod_3758  transcriptional regulator, Crp/Fnr family  42.37 
 
 
247 aa  198  6e-50  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2686  transcriptional regulator, Crp/Fnr family  42.67 
 
 
239 aa  197  1.0000000000000001e-49  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.038663  normal 
 
 
-
 
NC_011894  Mnod_7493  transcriptional regulator, Crp/Fnr family  42.02 
 
 
246 aa  197  1.0000000000000001e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7477  transcriptional regulator, Crp/Fnr family  41.6 
 
 
246 aa  195  6e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.403111  n/a   
 
 
-
 
NC_008254  Meso_1485  cyclic nucleotide-binding protein  41.2 
 
 
244 aa  189  2.9999999999999997e-47  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0060  transcriptional regulator, Crp/Fnr family  43.46 
 
 
384 aa  187  1e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2024  cyclic nucleotide-binding  43.39 
 
 
259 aa  187  2e-46  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.996332 
 
 
-
 
NC_011757  Mchl_2301  transcriptional regulator, Crp/Fnr family  43.39 
 
 
259 aa  187  2e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.161686 
 
 
-
 
NC_011757  Mchl_3385  transcriptional regulator, Crp/Fnr family  42.19 
 
 
384 aa  186  2e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0783  cyclic nucleotide-binding  41.35 
 
 
376 aa  184  1.0000000000000001e-45  Methylobacterium extorquens PA1  Bacteria  normal  0.0359827  normal 
 
 
-
 
NC_010725  Mpop_1986  transcriptional regulator, Crp/Fnr family  41.95 
 
 
259 aa  183  2.0000000000000003e-45  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0073  cyclic nucleotide-binding  41.5 
 
 
255 aa  183  3e-45  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3862  transcriptional regulator, Crp/Fnr family  42.49 
 
 
249 aa  182  4.0000000000000006e-45  Methylobacterium populi BJ001  Bacteria  normal  0.582037  normal  0.123136 
 
 
-
 
NC_010505  Mrad2831_1439  Crp/FNR family transcriptional regulator  43.53 
 
 
243 aa  180  2e-44  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.000118444 
 
 
-
 
NC_009485  BBta_6056  Crp/FNR family transcriptional regulator  36.96 
 
 
241 aa  176  4e-43  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0133  transcriptional regulator, Crp/Fnr family  40.69 
 
 
268 aa  175  7e-43  Methylobacterium populi BJ001  Bacteria  normal  0.564261  normal  0.0379159 
 
 
-
 
NC_010505  Mrad2831_1359  Crp/FNR family transcriptional regulator  43.35 
 
 
236 aa  174  9e-43  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.342582  normal  0.0135439 
 
 
-
 
NC_010511  M446_4564  Crp/FNR family transcriptional regulator  40.85 
 
 
257 aa  174  9.999999999999999e-43  Methylobacterium sp. 4-46  Bacteria  normal  decreased coverage  0.00106309 
 
 
-
 
NC_010511  M446_6403  Crp/FNR family transcriptional regulator  40.83 
 
 
246 aa  174  9.999999999999999e-43  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0772  cyclic nucleotide-binding  39.13 
 
 
254 aa  173  1.9999999999999998e-42  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4497  transcriptional regulator, Crp/Fnr family  40 
 
 
255 aa  173  1.9999999999999998e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0140276  n/a   
 
 
-
 
NC_010511  M446_1835  cyclic nucleotide-binding protein  42.55 
 
 
281 aa  172  3.9999999999999995e-42  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1184  transcriptional regulator, Crp/Fnr family  38.84 
 
 
243 aa  171  7.999999999999999e-42  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2391  CRP/FNR family transcriptional regulator  38.89 
 
 
274 aa  171  1e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0953  CRP/FNR family transcriptional regulator  38.89 
 
 
254 aa  171  1e-41  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2609  Crp/FNR family transcriptional regulator  40.93 
 
 
293 aa  167  1e-40  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.325512  normal 
 
 
-
 
NC_011894  Mnod_3167  transcriptional regulator, Crp/Fnr family  40.25 
 
 
307 aa  166  4e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2108  CRP/FNR family transcriptional regulator  36.97 
 
 
243 aa  165  6.9999999999999995e-40  Paracoccus denitrificans PD1222  Bacteria  normal  0.819689  normal  0.0771917 
 
 
-
 
NC_007958  RPD_3805  cyclic nucleotide-binding  37.6 
 
 
263 aa  165  8e-40  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4068  Crp/FNR family transcriptional regulator  37.97 
 
 
247 aa  163  2.0000000000000002e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.936766  normal 
 
 
-
 
NC_011004  Rpal_2367  putative transcriptional regulator, Crp/Fnr family  39.66 
 
 
255 aa  163  2.0000000000000002e-39  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0615204  n/a   
 
 
-
 
NC_011757  Mchl_3788  transcriptional regulator, Crp/Fnr family  39.75 
 
 
249 aa  162  4.0000000000000004e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.371562 
 
 
-
 
NC_010725  Mpop_5417  transcriptional regulator, Crp/Fnr family  40.53 
 
 
298 aa  161  7e-39  Methylobacterium populi BJ001  Bacteria  normal  0.36754  normal 
 
 
-
 
NC_010172  Mext_3480  cyclic nucleotide-binding  39.5 
 
 
249 aa  160  1e-38  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_5361  transcriptional regulator, Crp/Fnr family  38.66 
 
 
299 aa  157  1e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011893  Mnod_8765  putative transcriptional regulator, Crp/Fnr family  40.69 
 
 
244 aa  157  1e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.474033  n/a   
 
 
-
 
NC_010505  Mrad2831_1441  Crp/FNR family transcriptional regulator  40.5 
 
 
259 aa  157  2e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00010652 
 
 
-
 
NC_011894  Mnod_6130  putative transcriptional regulator, Crp/Fnr family  40.26 
 
 
244 aa  155  7e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4876  cyclic nucleotide-binding  38.24 
 
 
317 aa  155  8e-37  Methylobacterium extorquens PA1  Bacteria  normal  0.155933  normal 
 
 
-
 
NC_010511  M446_4036  Crp/FNR family transcriptional regulator  37.77 
 
 
315 aa  150  2e-35  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6249  Crp/FNR family transcriptional regulator  37.29 
 
 
281 aa  149  3e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.999867 
 
 
-
 
NC_010505  Mrad2831_4786  cyclic nucleotide-binding protein  36.52 
 
 
243 aa  145  6e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1230  Crp/FNR family transcriptional regulator  37.12 
 
 
263 aa  141  9.999999999999999e-33  Methylobacterium sp. 4-46  Bacteria  normal  0.583862  normal 
 
 
-
 
NC_009511  Swit_0955  CRP/FNR family transcriptional regulator  37.78 
 
 
226 aa  138  7e-32  Sphingomonas wittichii RW1  Bacteria  normal  0.869769  normal 
 
 
-
 
NC_009049  Rsph17029_0604  cyclic nucleotide-binding protein  35.81 
 
 
246 aa  138  7.999999999999999e-32  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1953  Crp/FNR family transcriptional regulator  35.37 
 
 
246 aa  137  2e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3616  Crp/FNR family transcriptional regulator  37.66 
 
 
243 aa  134  1.9999999999999998e-30  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3486  putative signal transduction histidine kinase  35.04 
 
 
243 aa  130  2.0000000000000002e-29  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.173486 
 
 
-
 
NC_010511  M446_5658  cyclic nucleotide-binding protein  34.44 
 
 
245 aa  129  4.0000000000000003e-29  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0414  Crp/FNR family transcriptional regulator  33.48 
 
 
252 aa  114  1.0000000000000001e-24  Brucella suis 1330  Bacteria  normal  0.766284  n/a   
 
 
-
 
NC_009504  BOV_A0357  Crp/FNR family transcriptional regulator  33.48 
 
 
252 aa  114  1.0000000000000001e-24  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1854  CRP/FNR family transcriptional regulator  29.83 
 
 
250 aa  111  1.0000000000000001e-23  Marinobacter aquaeolei VT8  Bacteria  normal  0.191124  n/a   
 
 
-
 
NC_010172  Mext_3499  CRP/FNR family transcriptional regulator  32.13 
 
 
286 aa  110  3e-23  Methylobacterium extorquens PA1  Bacteria  normal  0.519814  normal 
 
 
-
 
NC_011004  Rpal_3741  transcriptional regulator, Crp/Fnr family  33.33 
 
 
242 aa  108  7.000000000000001e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4822  cyclic nucleotide-binding protein  32.77 
 
 
243 aa  107  2e-22  Sinorhizobium medicae WSM419  Bacteria  normal  0.379105  normal  0.123433 
 
 
-
 
NC_009668  Oant_3367  CRP/FNR family transcriptional regulator  31.39 
 
 
252 aa  107  2e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.184948  n/a   
 
 
-
 
NC_007643  Rru_A1787  cyclic nucleotide-binding domain-containing protein  31.67 
 
 
263 aa  105  8e-22  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0266  CRP/FNR family transcriptional regulator  30.86 
 
 
253 aa  103  2e-21  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1000  transcriptional regulator, Crp/Fnr family  30.94 
 
 
250 aa  103  3e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.523077  normal  0.289991 
 
 
-
 
NC_011894  Mnod_5597  putative transcriptional regulator, Crp/Fnr family  34.39 
 
 
246 aa  103  3e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0675352  n/a   
 
 
-
 
NC_009636  Smed_2400  CRP/FNR family transcriptional regulator  29.82 
 
 
250 aa  102  4e-21  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0375093 
 
 
-
 
NC_008254  Meso_3865  Crp/FNR family transcriptional regulator  32.83 
 
 
252 aa  102  5e-21  Chelativorans sp. BNC1  Bacteria  normal  0.925805  n/a   
 
 
-
 
NC_007947  Mfla_1734  Crp/FNR family transcriptional regulator  30.73 
 
 
241 aa  100  1e-20  Methylobacillus flagellatus KT  Bacteria  normal  0.79675  hitchhiker  0.000773544 
 
 
-
 
NC_008825  Mpe_A2201  transcriptional regulator  32.31 
 
 
262 aa  101  1e-20  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.586423 
 
 
-
 
NC_012850  Rleg_1153  transcriptional regulator, Crp/Fnr family  30.49 
 
 
250 aa  100  2e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0983  Crp/FNR family transcriptional regulator  29.24 
 
 
245 aa  99.4  5e-20  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2575  Crp/FNR family transcriptional regulator  31.68 
 
 
240 aa  99.4  5e-20  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0196  Crp/FNR family transcriptional regulator  30.93 
 
 
253 aa  98.6  8e-20  Brucella suis 1330  Bacteria  normal  0.0367027  n/a   
 
 
-
 
NC_009505  BOV_0189  Crp/FNR family transcriptional regulator  30.09 
 
 
235 aa  98.6  9e-20  Brucella ovis ATCC 25840  Bacteria  normal  0.338052  n/a   
 
 
-
 
NC_008781  Pnap_0532  cyclic nucleotide-binding protein  29.07 
 
 
276 aa  97.8  1e-19  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.053126  normal  0.207643 
 
 
-
 
NC_009956  Dshi_3844  cyclic nucleotide-binding protein  28.19 
 
 
242 aa  97.4  2e-19  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5989  transcriptional regulator CRP family  32.82 
 
 
257 aa  95.5  7e-19  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0997  transcriptional regulator, Crp/Fnr family  32.08 
 
 
230 aa  95.1  8e-19  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2705  cyclic nucleotide-binding protein  29.46 
 
 
249 aa  93.6  2e-18  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1275  Crp/Fnr family transcriptional regulator  28.39 
 
 
249 aa  92  8e-18  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2934  cyclic nucleotide-binding protein  29.02 
 
 
249 aa  92  9e-18  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3568  cyclic nucleotide-binding domain-containing protein  30.85 
 
 
242 aa  89  6e-17  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4040  Crp/FNR family transcriptional regulator  29.8 
 
 
256 aa  85.5  7e-16  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.858211 
 
 
-
 
NC_013889  TK90_1862  transcriptional regulator, Crp/Fnr family  24.68 
 
 
250 aa  81.3  0.00000000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0720375  normal  0.182435 
 
 
-
 
NC_007794  Saro_0490  CRP/FNR family transcriptional regulator  33.55 
 
 
256 aa  77.8  0.0000000000001  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1951  transcriptional regulator FixK  30 
 
 
231 aa  77  0.0000000000003  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1036  transcriptional regulator FixK  30.56 
 
 
231 aa  73.9  0.000000000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0447  transcriptional regulator  26.09 
 
 
262 aa  74.3  0.000000000002  Dinoroseobacter shibae DFL 12  Bacteria  decreased coverage  0.00494896  normal 
 
 
-
 
NC_009621  Smed_6270  transcriptional regulator FixK  29.69 
 
 
211 aa  72.8  0.000000000005  Sinorhizobium medicae WSM419  Bacteria  normal  0.967473  normal  0.128199 
 
 
-
 
NC_007925  RPC_4055  transcriptional regulator FixK  29.57 
 
 
229 aa  72.4  0.000000000006  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4729  transcriptional regulator FixK  29.38 
 
 
230 aa  72  0.000000000008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
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