13 homologs were found in PanDaTox collection
for query gene Mpe_B0115 on replicon NC_008826
Organism: Methylibium petroleiphilum PM1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008826  Mpe_B0115  hypothetical protein  100 
 
 
157 aa  299  9e-81  Methylibium petroleiphilum PM1  Bacteria  normal  0.539233  hitchhiker  0.000011217 
 
 
-
 
NC_008340  Mlg_0075  RDD domain-containing protein  36.97 
 
 
185 aa  58.2  0.00000004  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0306278  normal 
 
 
-
 
NC_010644  Emin_0170  RDD domain-containing protein  31.52 
 
 
145 aa  57  0.0000001  Elusimicrobium minutum Pei191  Bacteria  decreased coverage  0.00000000534855  decreased coverage  0.00967799 
 
 
-
 
NC_011901  Tgr7_1788  RDD domain containing protein  29.94 
 
 
187 aa  54.3  0.0000006  Thioalkalivibrio sp. HL-EbGR7  Bacteria  hitchhiker  0.0098202  n/a   
 
 
-
 
NC_008312  Tery_2608  RDD domain-containing protein  31.15 
 
 
456 aa  48.9  0.00002  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.107491 
 
 
-
 
NC_010644  Emin_0171  RDD domain-containing protein  27.56 
 
 
140 aa  48.5  0.00004  Elusimicrobium minutum Pei191  Bacteria  decreased coverage  0.0000000652856  decreased coverage  0.0096302 
 
 
-
 
NC_007355  Mbar_A3591  hypothetical protein  28.19 
 
 
133 aa  48.1  0.00005  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.157612  normal  0.0949488 
 
 
-
 
NC_009712  Mboo_2289  RDD domain-containing protein  56.1 
 
 
202 aa  46.6  0.0001  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007520  Tcr_1706  RDD  38 
 
 
170 aa  46.2  0.0002  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.305495  n/a   
 
 
-
 
NC_013889  TK90_1148  RDD domain containing protein  29.68 
 
 
185 aa  43.1  0.001  Thioalkalivibrio sp. K90mix  Bacteria  hitchhiker  0.00101829  hitchhiker  0.000000000000525817 
 
 
-
 
NC_010717  PXO_04050  RDD family protein  31.53 
 
 
424 aa  43.1  0.002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_1213  RDD  42.59 
 
 
176 aa  41.6  0.005  Methanospirillum hungatei JF-1  Archaea  normal  0.0799296  normal  0.0127909 
 
 
-
 
NC_008312  Tery_2609  serine/threonine protein kinase  28.12 
 
 
415 aa  40.4  0.009  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.101255 
 
 
-
 
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