170 homologs were found in PanDaTox collection
for query gene Mnod_8793 on replicon NC_011893
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011893  Mnod_8793  hypothetical protein  100 
 
 
173 aa  345  2e-94  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.369764  n/a   
 
 
-
 
NC_010581  Bind_2123  hypothetical protein  49.7 
 
 
173 aa  159  3e-38  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.97009  normal 
 
 
-
 
NC_011138  MADE_01222  methyl-accepting chemotaxis protein  45.39 
 
 
580 aa  121  4e-27  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.566871  n/a   
 
 
-
 
NC_004578  PSPTO_0117  methyl-accepting chemotaxis protein  39.82 
 
 
658 aa  102  4e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_1412  methyl-accepting chemotaxis sensory transducer  41.96 
 
 
808 aa  100  1e-20  Methanospirillum hungatei JF-1  Archaea  normal  0.961328  normal  0.598579 
 
 
-
 
NC_007796  Mhun_2944  methyl-accepting chemotaxis sensory transducer  41.01 
 
 
806 aa  100  1e-20  Methanospirillum hungatei JF-1  Archaea  normal  0.0288682  normal  0.27333 
 
 
-
 
NC_010682  Rpic_3412  methyl-accepting chemotaxis sensory transducer  43.86 
 
 
662 aa  99  3e-20  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3136  putative methyl-accepting chemotaxis transmembrane protein  44.25 
 
 
661 aa  98.2  4e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  0.598743  normal 
 
 
-
 
NC_007650  BTH_II1684  methyl-accepting chemotaxis protein I  42.48 
 
 
676 aa  98.2  4e-20  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0507  methyl-accepting chemotaxis protein  42.48 
 
 
630 aa  98.2  5e-20  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0140  putative methyl-accepting chemotaxis protein  42.48 
 
 
684 aa  98.2  5e-20  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0610174  n/a   
 
 
-
 
NC_007796  Mhun_2669  methyl-accepting chemotaxis sensory transducer  43.57 
 
 
808 aa  97.8  6e-20  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3066  methyl-accepting chemotaxis sensory transducer  43.86 
 
 
662 aa  97.8  6e-20  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A1080  methyl-accepting chemotaxis protein  42.48 
 
 
687 aa  97.8  7e-20  Burkholderia pseudomallei 668  Bacteria  normal  0.469209  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2308  methyl-accepting chemotaxis protein II  42.48 
 
 
684 aa  97.4  8e-20  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0994  methyl-accepting chemotaxis protein  42.48 
 
 
678 aa  97.4  8e-20  Burkholderia pseudomallei 1106a  Bacteria  normal  0.799426  n/a   
 
 
-
 
NC_013421  Pecwa_3594  methyl-accepting chemotaxis sensory transducer  43.4 
 
 
646 aa  97.4  9e-20  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0071  histidine kinase, HAMP region: chemotaxis sensory transducer  38.05 
 
 
658 aa  96.3  2e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0210  methyl-accepting chemotaxis sensory transducer  38.6 
 
 
632 aa  95.9  2e-19  Pseudomonas putida W619  Bacteria  normal  0.248487  normal  0.150257 
 
 
-
 
NC_012917  PC1_3437  methyl-accepting chemotaxis sensory transducer  44.34 
 
 
646 aa  96.3  2e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.143807  n/a   
 
 
-
 
NC_012912  Dd1591_0772  methyl-accepting chemotaxis sensory transducer  41.07 
 
 
646 aa  96.3  2e-19  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00540264  n/a   
 
 
-
 
NC_008752  Aave_3828  methyl-accepting chemotaxis sensory transducer  39.62 
 
 
506 aa  95.9  3e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  0.188818  normal 
 
 
-
 
NC_002939  GSU1033  methyl-accepting chemotaxis protein  49.07 
 
 
533 aa  95.1  4e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3714  methyl-accepting chemotaxis sensory transducer  37.17 
 
 
660 aa  95.1  4e-19  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_0239  methyl-accepting chemotaxis sensory transducer  39.58 
 
 
793 aa  95.1  4e-19  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_010552  BamMC406_4192  methyl-accepting chemotaxis sensory transducer  37.17 
 
 
660 aa  95.1  4e-19  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0520721  normal  0.510764 
 
 
-
 
NC_002939  GSU1303  methyl-accepting chemotaxis protein  49.07 
 
 
494 aa  93.2  1e-18  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5515  chemotaxis sensory transducer  38.05 
 
 
658 aa  93.2  2e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.501051  normal  0.584272 
 
 
-
 
NC_010623  Bphy_4315  methyl-accepting chemotaxis sensory transducer  38.05 
 
 
656 aa  92.8  2e-18  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4309  methyl-accepting chemotaxis sensory transducer  38.05 
 
 
659 aa  92.8  2e-18  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.226298 
 
 
-
 
NC_007517  Gmet_1083  PAS/PAC sensor signal transduction histidine kinase  48.15 
 
 
986 aa  92.4  3e-18  Geobacter metallireducens GS-15  Bacteria  normal  0.0721424  decreased coverage  0.00000190438 
 
 
-
 
NC_009483  Gura_3063  methyl-accepting chemotaxis sensory transducer  49.07 
 
 
533 aa  92.4  3e-18  Geobacter uraniireducens Rf4  Bacteria  normal  0.378908  n/a   
 
 
-
 
NC_009484  Acry_2144  methyl-accepting chemotaxis sensory transducer  38.35 
 
 
556 aa  91.3  5e-18  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1293  methyl-accepting chemotaxis sensory transducer  39.64 
 
 
667 aa  91.3  6e-18  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1243  methyl-accepting chemotaxis sensory transducer  39.64 
 
 
667 aa  90.9  8e-18  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1313  methyl-accepting chemotaxis sensory transducer  39.64 
 
 
667 aa  90.9  8e-18  Shewanella sp. MR-7  Bacteria  decreased coverage  0.00146838  normal 
 
 
-
 
NC_010717  PXO_00916  methyl-accepting chemotaxis protein  35.61 
 
 
548 aa  90.5  1e-17  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.234107  n/a   
 
 
-
 
NC_009436  Ent638_0366  methyl-accepting chemotaxis sensory transducer  38.18 
 
 
643 aa  90.1  1e-17  Enterobacter sp. 638  Bacteria  normal  normal  0.0151066 
 
 
-
 
NC_009997  Sbal195_3134  methyl-accepting chemotaxis sensory transducer  37.84 
 
 
667 aa  90.5  1e-17  Shewanella baltica OS195  Bacteria  normal  0.0135223  normal  0.80442 
 
 
-
 
NC_008061  Bcen_4070  methyl-accepting chemotaxis sensory transducer  35.4 
 
 
660 aa  89.4  2e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4296  methyl-accepting chemotaxis sensory transducer  35.4 
 
 
660 aa  89.4  2e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3221  methyl-accepting chemotaxis sensory transducer  35.4 
 
 
660 aa  89.4  2e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.229974 
 
 
-
 
NC_012880  Dd703_0792  methyl-accepting chemotaxis sensory transducer  35.77 
 
 
651 aa  89.7  2e-17  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3114  methyl-accepting chemotaxis sensory transducer  37.72 
 
 
667 aa  89.4  2e-17  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1322  methyl-accepting chemotaxis sensory transducer  39.64 
 
 
667 aa  89.7  2e-17  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0149  methyl-accepting chemotaxis sensory transducer  47.62 
 
 
533 aa  88.2  5e-17  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2637  methyl-accepting chemotaxis sensory transducer  37.17 
 
 
667 aa  88.2  5e-17  Shewanella putrefaciens CN-32  Bacteria  normal  0.0295827  n/a   
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  48.62 
 
 
572 aa  87.8  7e-17  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_009052  Sbal_2976  methyl-accepting chemotaxis sensory transducer  37.84 
 
 
667 aa  87.4  8e-17  Shewanella baltica OS155  Bacteria  hitchhiker  0.000241408  n/a   
 
 
-
 
NC_011663  Sbal223_1387  methyl-accepting chemotaxis sensory transducer  37.84 
 
 
667 aa  87.4  8e-17  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  41.58 
 
 
680 aa  87.4  8e-17  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_009665  Shew185_2990  methyl-accepting chemotaxis sensory transducer  37.84 
 
 
667 aa  87.4  8e-17  Shewanella baltica OS185  Bacteria  normal  0.413203  n/a   
 
 
-
 
NC_004347  SO_3282  methyl-accepting chemotaxis protein  36.84 
 
 
667 aa  86.7  1e-16  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010424  Daud_1561  methyl-accepting chemotaxis sensory transducer  41.12 
 
 
528 aa  86.7  1e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1310  methyl-accepting chemotaxis sensory transducer  38.74 
 
 
667 aa  86.3  2e-16  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0620  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
512 aa  85.9  3e-16  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000106495  n/a   
 
 
-
 
NC_010506  Swoo_1568  methyl-accepting chemotaxis sensory transducer  37.84 
 
 
667 aa  85.5  3e-16  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2939  methyl-accepting chemotaxis sensory transducer  36.28 
 
 
672 aa  84.7  5e-16  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2151  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
707 aa  84.3  8e-16  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.461641 
 
 
-
 
NC_013223  Dret_0342  methyl-accepting chemotaxis sensory transducer  37.6 
 
 
699 aa  83.6  0.000000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6894  methyl-accepting chemotaxis sensory transducer  37.17 
 
 
657 aa  83.2  0.000000000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.068141  normal  0.373533 
 
 
-
 
NC_008345  Sfri_1146  methyl-accepting chemotaxis sensory transducer  35.96 
 
 
668 aa  82.8  0.000000000000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.970933  n/a   
 
 
-
 
NC_010814  Glov_1733  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
823 aa  82.8  0.000000000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0631  chemotaxis sensory transducer  37.61 
 
 
656 aa  82.8  0.000000000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00821954  n/a   
 
 
-
 
NC_008700  Sama_2345  putative methyl-accepting chemotaxis sensory transducer  28.8 
 
 
666 aa  81.6  0.000000000000005  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.60686 
 
 
-
 
NC_009654  Mmwyl1_1385  methyl-accepting chemotaxis sensory transducer  37.76 
 
 
683 aa  81.6  0.000000000000005  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_2016  methyl-accepting chemotaxis sensory transducer  40.37 
 
 
519 aa  80.9  0.000000000000007  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.103091 
 
 
-
 
NC_007796  Mhun_0495  methyl-accepting chemotaxis sensory transducer  34.25 
 
 
795 aa  80.5  0.00000000000001  Methanospirillum hungatei JF-1  Archaea  normal  0.132321  normal 
 
 
-
 
NC_009485  BBta_4931  putative methyl-accepting chemotaxis protein  41.24 
 
 
567 aa  80.1  0.00000000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2373  methyl-accepting chemotaxis sensory transducer  39.22 
 
 
718 aa  79.7  0.00000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0401  methyl-accepting chemotaxis sensory transducer  35.35 
 
 
615 aa  78.6  0.00000000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.000192098 
 
 
-
 
NC_011369  Rleg2_0369  methyl-accepting chemotaxis sensory transducer  34.34 
 
 
615 aa  78.6  0.00000000000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  hitchhiker  0.00881781 
 
 
-
 
NC_013385  Adeg_1228  methyl-accepting chemotaxis sensory transducer  36.79 
 
 
523 aa  78.2  0.00000000000006  Ammonifex degensii KC4  Bacteria  normal  0.429585  n/a   
 
 
-
 
NC_013385  Adeg_1306  diguanylate cyclase  38.32 
 
 
615 aa  77.8  0.00000000000007  Ammonifex degensii KC4  Bacteria  normal  0.550913  n/a   
 
 
-
 
NC_008609  Ppro_1138  multi-sensor hybrid histidine kinase  38.57 
 
 
983 aa  76.6  0.0000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_3647  methyl-accepting chemotaxis protein  35.34 
 
 
680 aa  75.5  0.0000000000003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_20550  methyl-accepting chemotaxis protein  31.06 
 
 
733 aa  75.9  0.0000000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.375054  normal  0.44591 
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  36.27 
 
 
674 aa  75.5  0.0000000000004  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1675  methyl-accepting chemotaxis sensory transducer  42.06 
 
 
572 aa  75.5  0.0000000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007519  Dde_2411  methyl-accepting chemotaxis sensory transducer  36.75 
 
 
807 aa  74.3  0.0000000000007  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00900461  n/a   
 
 
-
 
NC_011146  Gbem_1040  multi-sensor signal transduction histidine kinase  41.51 
 
 
590 aa  73.2  0.000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3221  PAS/PAC sensor signal transduction histidine kinase  35.29 
 
 
590 aa  73.2  0.000000000002  Geobacter sp. M21  Bacteria  n/a    normal  0.128603 
 
 
-
 
NC_008346  Swol_0927  putative methyl-accepting chemotaxis sensory transducer  36.79 
 
 
572 aa  73.2  0.000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
686 aa  73.2  0.000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  35.29 
 
 
674 aa  72.8  0.000000000003  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_013456  VEA_002906  methyl-accepting chemotaxis protein  29.57 
 
 
678 aa  71.6  0.000000000005  Vibrio sp. Ex25  Bacteria  normal  0.816112  n/a   
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  36.51 
 
 
740 aa  70.9  0.000000000008  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_010505  Mrad2831_2154  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
572 aa  70.9  0.000000000009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  34.55 
 
 
719 aa  70.9  0.000000000009  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_3116  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.65 
 
 
806 aa  70.5  0.00000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    hitchhiker  0.00162037 
 
 
-
 
NC_007498  Pcar_2467  putative methyl-accepting chemotaxis protein (MCP)  35.58 
 
 
729 aa  69.3  0.00000000003  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0568  methyl-accepting chemotaxis sensory transducer  35.79 
 
 
813 aa  68.9  0.00000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  0.390162  normal  0.929296 
 
 
-
 
NC_007604  Synpcc7942_1816  periplasmic sensor hybrid histidine kinase  37.37 
 
 
977 aa  68.2  0.00000000005  Synechococcus elongatus PCC 7942  Bacteria  normal  0.218789  normal  0.39116 
 
 
-
 
NC_011146  Gbem_0809  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
532 aa  68.2  0.00000000005  Geobacter bemidjiensis Bem  Bacteria  normal  0.826751  n/a   
 
 
-
 
NC_009675  Anae109_3046  putative PAS/PAC sensor protein  39.39 
 
 
660 aa  67.8  0.00000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3699  histidine kinase  32.79 
 
 
998 aa  67.4  0.0000000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_5403  methyl-accepting chemotaxis sensory transducer  39.78 
 
 
538 aa  66.6  0.0000000002  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2453  methyl-accepting chemotaxis sensory transducer  33.96 
 
 
572 aa  64.7  0.0000000007  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3453  methyl-accepting chemotaxis sensory transducer  37 
 
 
532 aa  63.9  0.000000001  Geobacter sp. M21  Bacteria  n/a    normal  0.0235494 
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  36.27 
 
 
715 aa  63.9  0.000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
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