282 homologs were found in PanDaTox collection
for query gene Mnod_8765 on replicon NC_011893
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011893  Mnod_8765  putative transcriptional regulator, Crp/Fnr family  100 
 
 
244 aa  500  1e-141  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.474033  n/a   
 
 
-
 
NC_011894  Mnod_6130  putative transcriptional regulator, Crp/Fnr family  96.72 
 
 
244 aa  485  1e-136  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2990  transcriptional regulator, Crp/Fnr family  42.24 
 
 
244 aa  188  6e-47  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2763  cyclic nucleotide-binding  42.24 
 
 
244 aa  188  6e-47  Methylobacterium extorquens PA1  Bacteria  normal  0.746131  normal 
 
 
-
 
NC_010725  Mpop_2886  transcriptional regulator, Crp/Fnr family  42.98 
 
 
244 aa  185  5e-46  Methylobacterium populi BJ001  Bacteria  normal  0.473656  normal 
 
 
-
 
NC_011757  Mchl_3385  transcriptional regulator, Crp/Fnr family  43.91 
 
 
384 aa  184  9e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2024  cyclic nucleotide-binding  43.91 
 
 
259 aa  183  2e-45  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.996332 
 
 
-
 
NC_011757  Mchl_2301  transcriptional regulator, Crp/Fnr family  43.91 
 
 
259 aa  183  2e-45  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.161686 
 
 
-
 
NC_011757  Mchl_0060  transcriptional regulator, Crp/Fnr family  43.48 
 
 
384 aa  182  6e-45  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0133  transcriptional regulator, Crp/Fnr family  43.29 
 
 
268 aa  181  1e-44  Methylobacterium populi BJ001  Bacteria  normal  0.564261  normal  0.0379159 
 
 
-
 
NC_010511  M446_6209  Crp/FNR family transcriptional regulator  40.6 
 
 
247 aa  180  2e-44  Methylobacterium sp. 4-46  Bacteria  normal  0.0102902  normal  0.673418 
 
 
-
 
NC_010725  Mpop_1986  transcriptional regulator, Crp/Fnr family  43.04 
 
 
259 aa  179  3e-44  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0783  cyclic nucleotide-binding  41.74 
 
 
376 aa  177  1e-43  Methylobacterium extorquens PA1  Bacteria  normal  0.0359827  normal 
 
 
-
 
NC_010172  Mext_0073  cyclic nucleotide-binding  42.11 
 
 
255 aa  177  1e-43  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3758  transcriptional regulator, Crp/Fnr family  40.68 
 
 
247 aa  177  2e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5597  putative transcriptional regulator, Crp/Fnr family  41.28 
 
 
246 aa  173  2e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0675352  n/a   
 
 
-
 
NC_010505  Mrad2831_1441  Crp/FNR family transcriptional regulator  46.77 
 
 
259 aa  172  4e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00010652 
 
 
-
 
NC_010172  Mext_3499  CRP/FNR family transcriptional regulator  40.42 
 
 
286 aa  171  1e-41  Methylobacterium extorquens PA1  Bacteria  normal  0.519814  normal 
 
 
-
 
NC_009485  BBta_4270  CRP/FNR family transcriptional regulator  40.2 
 
 
225 aa  166  4e-40  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0893417 
 
 
-
 
NC_011757  Mchl_5361  transcriptional regulator, Crp/Fnr family  42.29 
 
 
299 aa  164  1e-39  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4876  cyclic nucleotide-binding  42.29 
 
 
317 aa  164  1e-39  Methylobacterium extorquens PA1  Bacteria  normal  0.155933  normal 
 
 
-
 
NC_010725  Mpop_5417  transcriptional regulator, Crp/Fnr family  40.8 
 
 
298 aa  163  3e-39  Methylobacterium populi BJ001  Bacteria  normal  0.36754  normal 
 
 
-
 
NC_010725  Mpop_3862  transcriptional regulator, Crp/Fnr family  40.35 
 
 
249 aa  161  1e-38  Methylobacterium populi BJ001  Bacteria  normal  0.582037  normal  0.123136 
 
 
-
 
NC_011894  Mnod_7493  transcriptional regulator, Crp/Fnr family  38.1 
 
 
246 aa  158  6e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3167  transcriptional regulator, Crp/Fnr family  37 
 
 
307 aa  157  1e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2433  Crp/FNR family transcriptional regulator  40.69 
 
 
247 aa  157  1e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.168738  normal  0.817452 
 
 
-
 
NC_011757  Mchl_3389  transcriptional regulator, Crp/Fnr family  36.6 
 
 
248 aa  156  2e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6249  Crp/FNR family transcriptional regulator  36.51 
 
 
281 aa  156  3e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.999867 
 
 
-
 
NC_010511  M446_1835  cyclic nucleotide-binding protein  38.3 
 
 
281 aa  156  3e-37  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7477  transcriptional regulator, Crp/Fnr family  38.86 
 
 
246 aa  154  9e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.403111  n/a   
 
 
-
 
NC_010511  M446_6403  Crp/FNR family transcriptional regulator  39.3 
 
 
246 aa  154  1e-36  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4036  Crp/FNR family transcriptional regulator  36.7 
 
 
315 aa  153  2e-36  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3788  transcriptional regulator, Crp/Fnr family  40.89 
 
 
249 aa  153  3e-36  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.371562 
 
 
-
 
NC_010172  Mext_3480  cyclic nucleotide-binding  40.89 
 
 
249 aa  153  3e-36  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1230  Crp/FNR family transcriptional regulator  37.89 
 
 
263 aa  152  5e-36  Methylobacterium sp. 4-46  Bacteria  normal  0.583862  normal 
 
 
-
 
NC_010505  Mrad2831_1359  Crp/FNR family transcriptional regulator  36.75 
 
 
236 aa  150  2e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.342582  normal  0.0135439 
 
 
-
 
NC_011894  Mnod_4497  transcriptional regulator, Crp/Fnr family  34.5 
 
 
255 aa  147  2e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0140276  n/a   
 
 
-
 
NC_012850  Rleg_2944  transcriptional regulator, Crp/Fnr family  37.27 
 
 
246 aa  145  8e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0738845  normal 
 
 
-
 
NC_011894  Mnod_1991  transcriptional regulator, Crp/Fnr family  36.09 
 
 
249 aa  144  9e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.250977  n/a   
 
 
-
 
NC_011369  Rleg2_2686  transcriptional regulator, Crp/Fnr family  36.48 
 
 
239 aa  144  2e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.038663  normal 
 
 
-
 
NC_010505  Mrad2831_1439  Crp/FNR family transcriptional regulator  36.21 
 
 
243 aa  143  3e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.000118444 
 
 
-
 
NC_010511  M446_4564  Crp/FNR family transcriptional regulator  34.76 
 
 
257 aa  142  4e-33  Methylobacterium sp. 4-46  Bacteria  normal  decreased coverage  0.00106309 
 
 
-
 
NC_010725  Mpop_3832  transcriptional regulator, Crp/Fnr family  37.72 
 
 
245 aa  141  8e-33  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2367  putative transcriptional regulator, Crp/Fnr family  35.12 
 
 
255 aa  141  9e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0615204  n/a   
 
 
-
 
NC_010172  Mext_0772  cyclic nucleotide-binding  33.48 
 
 
254 aa  139  6e-32  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4786  cyclic nucleotide-binding protein  34.91 
 
 
243 aa  137  1e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2950  Crp/FNR family transcriptional regulator  32.61 
 
 
250 aa  134  1e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal 
 
 
-
 
NC_008254  Meso_1485  cyclic nucleotide-binding protein  34.52 
 
 
244 aa  133  3e-30  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0953  CRP/FNR family transcriptional regulator  34.78 
 
 
254 aa  127  1e-28  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0859  CRP/FNR family transcriptional regulator  39.01 
 
 
234 aa  121  1e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0477074 
 
 
-
 
NC_009511  Swit_0955  CRP/FNR family transcriptional regulator  39.01 
 
 
226 aa  120  2e-26  Sphingomonas wittichii RW1  Bacteria  normal  0.869769  normal 
 
 
-
 
NC_011894  Mnod_1427  putative transcriptional regulator, Crp/Fnr family  30 
 
 
267 aa  120  2e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3741  transcriptional regulator, Crp/Fnr family  38.04 
 
 
242 aa  118  7e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2447  cyclic nucleotide-binding protein  34.21 
 
 
255 aa  117  1e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2609  Crp/FNR family transcriptional regulator  36.68 
 
 
293 aa  116  3e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.325512  normal 
 
 
-
 
NC_007493  RSP_1953  Crp/FNR family transcriptional regulator  30.26 
 
 
246 aa  107  2e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2391  CRP/FNR family transcriptional regulator  31.3 
 
 
274 aa  106  4e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_0604  cyclic nucleotide-binding protein  29.82 
 
 
246 aa  106  4e-22  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3486  putative signal transduction histidine kinase  30.7 
 
 
243 aa  105  5e-22  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.173486 
 
 
-
 
NC_007494  RSP_3616  Crp/FNR family transcriptional regulator  29.39 
 
 
243 aa  103  3e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2108  CRP/FNR family transcriptional regulator  29.57 
 
 
243 aa  99  7e-20  Paracoccus denitrificans PD1222  Bacteria  normal  0.819689  normal  0.0771917 
 
 
-
 
NC_011004  Rpal_1184  transcriptional regulator, Crp/Fnr family  27.19 
 
 
243 aa  95.1  9e-19  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6056  Crp/FNR family transcriptional regulator  26.75 
 
 
241 aa  95.1  9e-19  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0266  CRP/FNR family transcriptional regulator  27.88 
 
 
253 aa  91.3  1e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3367  CRP/FNR family transcriptional regulator  30.53 
 
 
252 aa  90.5  2e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.184948  n/a   
 
 
-
 
NC_007778  RPB_4068  Crp/FNR family transcriptional regulator  26.32 
 
 
247 aa  89.7  4e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.936766  normal 
 
 
-
 
NC_009505  BOV_0189  Crp/FNR family transcriptional regulator  27.6 
 
 
235 aa  89.4  5e-17  Brucella ovis ATCC 25840  Bacteria  normal  0.338052  n/a   
 
 
-
 
NC_004310  BR0196  Crp/FNR family transcriptional regulator  28.21 
 
 
253 aa  87.8  1e-16  Brucella suis 1330  Bacteria  normal  0.0367027  n/a   
 
 
-
 
NC_009504  BOV_A0357  Crp/FNR family transcriptional regulator  27.98 
 
 
252 aa  87.4  2e-16  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0414  Crp/FNR family transcriptional regulator  27.98 
 
 
252 aa  87.4  2e-16  Brucella suis 1330  Bacteria  normal  0.766284  n/a   
 
 
-
 
NC_007958  RPD_3805  cyclic nucleotide-binding  26.75 
 
 
263 aa  86.3  4e-16  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_0532  cyclic nucleotide-binding protein  27.84 
 
 
276 aa  83.2  3e-15  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.053126  normal  0.207643 
 
 
-
 
NC_013889  TK90_1862  transcriptional regulator, Crp/Fnr family  29.79 
 
 
250 aa  83.2  3e-15  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0720375  normal  0.182435 
 
 
-
 
NC_008254  Meso_2575  Crp/FNR family transcriptional regulator  27.94 
 
 
240 aa  81.3  1e-14  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1734  Crp/FNR family transcriptional regulator  24.88 
 
 
241 aa  77  2e-13  Methylobacillus flagellatus KT  Bacteria  normal  0.79675  hitchhiker  0.000773544 
 
 
-
 
NC_011988  Avi_5989  transcriptional regulator CRP family  28.19 
 
 
257 aa  77.8  2e-13  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2201  transcriptional regulator  24.32 
 
 
262 aa  76.6  3e-13  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.586423 
 
 
-
 
NC_007963  Csal_0983  Crp/FNR family transcriptional regulator  26.69 
 
 
245 aa  77  3e-13  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1854  CRP/FNR family transcriptional regulator  25.11 
 
 
250 aa  76.3  4e-13  Marinobacter aquaeolei VT8  Bacteria  normal  0.191124  n/a   
 
 
-
 
NC_009620  Smed_4822  cyclic nucleotide-binding protein  27.75 
 
 
243 aa  75.9  5e-13  Sinorhizobium medicae WSM419  Bacteria  normal  0.379105  normal  0.123433 
 
 
-
 
NC_009952  Dshi_0447  transcriptional regulator  30.2 
 
 
262 aa  75.9  6e-13  Dinoroseobacter shibae DFL 12  Bacteria  decreased coverage  0.00494896  normal 
 
 
-
 
NC_009956  Dshi_3844  cyclic nucleotide-binding protein  27.87 
 
 
242 aa  75.9  6e-13  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1787  cyclic nucleotide-binding domain-containing protein  24.87 
 
 
263 aa  75.5  8e-13  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_1000  transcriptional regulator, Crp/Fnr family  28.09 
 
 
250 aa  72  9e-12  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.523077  normal  0.289991 
 
 
-
 
NC_007493  RSP_1275  Crp/Fnr family transcriptional regulator  26.39 
 
 
249 aa  70.5  2e-11  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_0490  CRP/FNR family transcriptional regulator  25.97 
 
 
256 aa  71.2  2e-11  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_2934  cyclic nucleotide-binding protein  26.39 
 
 
249 aa  70.5  3e-11  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0997  transcriptional regulator, Crp/Fnr family  25.77 
 
 
230 aa  69.3  6e-11  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2705  cyclic nucleotide-binding protein  28.26 
 
 
249 aa  68.2  1e-10  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1279  transcriptional regulator, Crp/Fnr family  26.01 
 
 
227 aa  67.8  1e-10  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0123359  normal  0.583782 
 
 
-
 
NC_012850  Rleg_1153  transcriptional regulator, Crp/Fnr family  26.5 
 
 
250 aa  68.2  1e-10  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4040  Crp/FNR family transcriptional regulator  24.58 
 
 
256 aa  67.8  2e-10  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.858211 
 
 
-
 
NC_008254  Meso_3865  Crp/FNR family transcriptional regulator  29.05 
 
 
252 aa  67.4  2e-10  Chelativorans sp. BNC1  Bacteria  normal  0.925805  n/a   
 
 
-
 
NC_009636  Smed_2400  CRP/FNR family transcriptional regulator  24.6 
 
 
250 aa  67.8  2e-10  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0375093 
 
 
-
 
NC_010511  M446_5658  cyclic nucleotide-binding protein  26.38 
 
 
245 aa  66.6  3e-10  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1993  fumarate/nitrate reduction transcriptional regulator  22.64 
 
 
249 aa  65.1  9e-10  Shewanella loihica PV-4  Bacteria  normal  0.238952  normal 
 
 
-
 
NC_009952  Dshi_0660  transcriptional regulator  26.21 
 
 
249 aa  64.3  1e-09  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2360  transcriptional regulator, Crp/Fnr family  24.77 
 
 
240 aa  64.7  1e-09  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.948966  hitchhiker  0.00636029 
 
 
-
 
NC_009636  Smed_1742  CRP/FNR family transcriptional regulator  25.91 
 
 
242 aa  64.3  2e-09  Sinorhizobium medicae WSM419  Bacteria  normal  0.275504  normal  0.265558 
 
 
-
 
NC_003910  CPS_1987  fumarate/nitrate reduction transcriptional regulator  23.67 
 
 
239 aa  61.6  1e-08  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
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