15 homologs were found in PanDaTox collection
for query gene Mnod_8293 on replicon NC_011892
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011892  Mnod_8293  hypothetical protein  100 
 
 
110 aa  225  2e-58  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.988763  n/a   
 
 
-
 
NC_009485  BBta_0485  hypothetical protein  48.6 
 
 
111 aa  97.1  8e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.171574 
 
 
-
 
NC_013730  Slin_3510  hypothetical protein  36.36 
 
 
116 aa  72  0.000000000003  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0628  hypothetical protein  36 
 
 
111 aa  68.6  0.00000000003  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00633801  normal 
 
 
-
 
NC_011757  Mchl_0136  hypothetical protein  41.49 
 
 
118 aa  68.2  0.00000000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.195984  normal  0.314432 
 
 
-
 
NC_009441  Fjoh_1571  hypothetical protein  29.52 
 
 
106 aa  66.6  0.0000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0193  hypothetical protein  40.43 
 
 
118 aa  65.1  0.0000000003  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.552024 
 
 
-
 
NC_010725  Mpop_0225  hypothetical protein  40.43 
 
 
118 aa  65.5  0.0000000003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2827  hypothetical protein  35.24 
 
 
119 aa  63.5  0.0000000009  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1645  hypothetical protein  40.82 
 
 
122 aa  63.5  0.0000000009  Caulobacter sp. K31  Bacteria  normal  normal  0.0652941 
 
 
-
 
NC_010505  Mrad2831_4338  hypothetical protein  34.65 
 
 
113 aa  59.7  0.00000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0504151 
 
 
-
 
NC_013739  Cwoe_4027  hypothetical protein  32.38 
 
 
112 aa  56.6  0.0000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.998765  normal 
 
 
-
 
NC_009953  Sare_2141  hypothetical protein  36.19 
 
 
153 aa  51.6  0.000004  Salinispora arenicola CNS-205  Bacteria  normal  0.562387  normal  0.0156021 
 
 
-
 
NC_008009  Acid345_4127  hypothetical protein  33.94 
 
 
117 aa  50.4  0.000009  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.810917 
 
 
-
 
NC_013595  Sros_3874  hypothetical protein  32.08 
 
 
120 aa  49.3  0.00002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0480065 
 
 
-
 
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