22 homologs were found in PanDaTox collection
for query gene Mnod_8275 on replicon NC_011892
Organism: Methylobacterium nodulans ORS 2060



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011892  Mnod_8275    100 
 
 
120 bp  238  3e-61  Methylobacterium nodulans ORS 2060  Bacteria  decreased coverage  0.000772942  n/a   
 
 
-
 
NC_011894  Mnod_7605    88.03 
 
 
437 bp  121  3.9999999999999996e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8296    87.5 
 
 
336 bp  95.6  2e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0172471  n/a   
 
 
-
 
NC_010502  Mrad2831_6474  hypothetical protein  94.64 
 
 
426 bp  87.7  6e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_010518  Mrad2831_6451  hypothetical protein  94.64 
 
 
426 bp  87.7  6e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_010514  Mrad2831_6379  hypothetical protein  92.86 
 
 
429 bp  79.8  0.0000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_010517  Mrad2831_6409  hypothetical protein  92.86 
 
 
429 bp  79.8  0.0000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal 
 
 
-
 
NC_010373  M446_7014  hypothetical protein  83.62 
 
 
435 bp  79.8  0.0000000000001  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1956    88.89 
 
 
120 bp  79.8  0.0000000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4724    87.67 
 
 
446 bp  73.8  0.000000000009  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010514  Mrad2831_6356  hypothetical protein  91.23 
 
 
429 bp  73.8  0.000000000009  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_011760  Mchl_5740  hypothetical protein  84.54 
 
 
432 bp  73.8  0.000000000009  Methylobacterium chloromethanicum CM4  Bacteria  n/a    n/a   
 
 
-
 
NC_010511  M446_6890    91.07 
 
 
428 bp  71.9  0.00000000003  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0114  hypothetical protein  91.07 
 
 
372 bp  71.9  0.00000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.327951  normal 
 
 
-
 
NC_010511  M446_2887    85.53 
 
 
410 bp  63.9  0.000000009  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011758  Mchl_5529  hypothetical protein  87.27 
 
 
423 bp  54  0.000008  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.115391 
 
 
-
 
NC_011758  Mchl_5546  hypothetical protein  87.27 
 
 
426 bp  54  0.000008  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0187458 
 
 
-
 
NC_010511  M446_0751    86.44 
 
 
278 bp  54  0.000008  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7636  hypothetical protein  96.55 
 
 
399 bp  50.1  0.0001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010727  Mpop_5435  hypothetical protein  88.89 
 
 
438 bp  50.1  0.0001  Methylobacterium populi BJ001  Bacteria  n/a    n/a   
 
 
-
 
NC_011758  Mchl_5618    85.71 
 
 
226 bp  48.1  0.0005  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0917404  normal  0.192189 
 
 
-
 
NC_010511  M446_3334    90 
 
 
96 bp  48.1  0.0005  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>