213 homologs were found in PanDaTox collection
for query gene Mnod_3559 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_3559  transcriptional regulator, MucR family  100 
 
 
144 aa  282  1e-75  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5073  transcriptional regulator, MucR family  84.85 
 
 
139 aa  216  8e-56  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3845  transcriptional regulator, MucR family  81.48 
 
 
135 aa  214  5e-55  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.581929  n/a   
 
 
-
 
NC_011894  Mnod_2620  transcriptional regulator, MucR family  76.87 
 
 
140 aa  206  7e-53  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.297322  n/a   
 
 
-
 
NC_011894  Mnod_2484  transcriptional regulator, MucR family  80.3 
 
 
134 aa  204  2e-52  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.281768  n/a   
 
 
-
 
NC_011887  Mnod_8232  transcriptional regulator, MucR family  76.09 
 
 
150 aa  200  4e-51  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0643273  n/a   
 
 
-
 
NC_011894  Mnod_4087  transcriptional regulator, MucR family  78.95 
 
 
141 aa  198  2e-50  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.242362  n/a   
 
 
-
 
NC_011894  Mnod_4253  transcriptional regulator, MucR family  75.54 
 
 
147 aa  195  2e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_6579  transcriptional regulator, MucR family  65.52 
 
 
166 aa  181  2e-45  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2091  transcriptional regulator, MucR family  75.21 
 
 
162 aa  181  4e-45  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8754  transcriptional regulator, MucR family  65.41 
 
 
143 aa  176  1e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.17166  n/a   
 
 
-
 
NC_010511  M446_6603  MucR family transcriptional regulator  67.42 
 
 
171 aa  175  2e-43  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.108608 
 
 
-
 
NC_011894  Mnod_0549  transcriptional regulator, MucR family  68.6 
 
 
147 aa  175  2e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.973698  n/a   
 
 
-
 
NC_011894  Mnod_7625  transcriptional regulator, MucR family  68.03 
 
 
166 aa  172  2e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_2999  transcriptional regulator, MucR family  66.15 
 
 
134 aa  171  3e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7194  transcriptional regulator, MucR family  70.25 
 
 
145 aa  171  4e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3011  transcriptional regulator, MucR family  69.49 
 
 
173 aa  169  8e-42  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6739  MucR family transcriptional regulator  67.21 
 
 
164 aa  168  2e-41  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.055135 
 
 
-
 
NC_010511  M446_5932  MucR family transcriptional regulator  65.91 
 
 
145 aa  167  4e-41  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.54766 
 
 
-
 
NC_011894  Mnod_6541  transcriptional regulator, MucR family  63.91 
 
 
144 aa  167  4e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6742  MucR family transcriptional regulator  69.49 
 
 
143 aa  166  9e-41  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0991744 
 
 
-
 
NC_011893  Mnod_8789  transcriptional regulator, MucR family  66.4 
 
 
147 aa  165  2e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.292559  n/a   
 
 
-
 
NC_010511  M446_0065  MucR family transcriptional regulator  64.66 
 
 
133 aa  165  2e-40  Methylobacterium sp. 4-46  Bacteria  normal  0.126654  normal  0.420331 
 
 
-
 
NC_010511  M446_3346  MucR family transcriptional regulator  63.64 
 
 
163 aa  165  2e-40  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3684  transcriptional regulator, MucR family  67.77 
 
 
162 aa  165  2e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1890  MucR family transcriptional regulator  68.64 
 
 
143 aa  164  4e-40  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6298  MucR family transcriptional regulator  65.65 
 
 
142 aa  162  1e-39  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0539112 
 
 
-
 
NC_011894  Mnod_4973  transcriptional regulator, MucR family  64.66 
 
 
160 aa  162  2e-39  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4097  MucR family transcriptional regulator  69.11 
 
 
143 aa  162  2e-39  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.812633 
 
 
-
 
NC_010511  M446_4730  MucR family transcriptional regulator  65.25 
 
 
145 aa  161  3e-39  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7402  transcriptional regulator, MucR family  64.12 
 
 
133 aa  160  4e-39  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.169134  n/a   
 
 
-
 
NC_010511  M446_6899  MucR family transcriptional regulator  61.29 
 
 
164 aa  160  6e-39  Methylobacterium sp. 4-46  Bacteria  normal  0.106465  normal 
 
 
-
 
NC_011894  Mnod_1559  transcriptional regulator, MucR family  62.12 
 
 
164 aa  159  8e-39  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.192096  n/a   
 
 
-
 
NC_010511  M446_6580  MucR family transcriptional regulator  62.6 
 
 
133 aa  159  2e-38  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0358165 
 
 
-
 
NC_011894  Mnod_1808  transcriptional regulator, MucR family  64.46 
 
 
160 aa  158  3e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1006  MucR family transcriptional regulator  63.49 
 
 
144 aa  157  4e-38  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5563  MucR family transcriptional regulator  66.95 
 
 
143 aa  156  7e-38  Methylobacterium sp. 4-46  Bacteria  normal  0.550782  normal 
 
 
-
 
NC_011894  Mnod_5626  transcriptional regulator, MucR family  71.43 
 
 
133 aa  154  3e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.63695  n/a   
 
 
-
 
NC_010511  M446_5488  MucR family transcriptional regulator  61.07 
 
 
158 aa  154  3e-37  Methylobacterium sp. 4-46  Bacteria  normal  0.622801  normal  0.0617685 
 
 
-
 
NC_010511  M446_4944  MucR family transcriptional regulator  63.64 
 
 
158 aa  152  1e-36  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3504  transcriptional regulator, MucR family  65.57 
 
 
131 aa  152  2e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4116  MucR family transcriptional regulator  70.34 
 
 
140 aa  150  7e-36  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.147804 
 
 
-
 
NC_011894  Mnod_0124  transcriptional regulator, MucR family  59.35 
 
 
137 aa  148  3e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.376819  n/a   
 
 
-
 
NC_010511  M446_0608  MucR family transcriptional regulator  60.77 
 
 
166 aa  146  9e-35  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0460505 
 
 
-
 
NC_011894  Mnod_4660  transcriptional regulator, MucR family  60.33 
 
 
139 aa  144  5e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.20016  n/a   
 
 
-
 
NC_011894  Mnod_2100  transcriptional regulator, MucR family  65.44 
 
 
166 aa  144  5e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6164  MucR family transcriptional regulator  60.8 
 
 
174 aa  143  7e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0075  MucR family transcriptional regulator  56.35 
 
 
166 aa  142  2e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2474  transcriptional regulator, MucR family  55.56 
 
 
168 aa  141  3e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0587  MucR family transcriptional regulator  57.35 
 
 
157 aa  140  4e-33  Methylobacterium sp. 4-46  Bacteria  normal  0.0109398  hitchhiker  0.00472777 
 
 
-
 
NC_011892  Mnod_8753  transcriptional regulator, MucR family  57.85 
 
 
175 aa  140  6e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.286217  n/a   
 
 
-
 
NC_010725  Mpop_5315  transcriptional regulator, MucR family  56.45 
 
 
171 aa  140  6e-33  Methylobacterium populi BJ001  Bacteria  normal  0.160957  normal  0.979168 
 
 
-
 
NC_010172  Mext_2834  ROSMUCR transcriptional regulator  53.19 
 
 
162 aa  138  2e-32  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3060  transcriptional regulator, MucR family  53.19 
 
 
162 aa  138  2e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011892  Mnod_8284  transcriptional regulator, MucR family  54.74 
 
 
143 aa  138  2e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.647815  n/a   
 
 
-
 
NC_010725  Mpop_2952  transcriptional regulator, MucR family  53.19 
 
 
160 aa  138  3e-32  Methylobacterium populi BJ001  Bacteria  normal  0.324392  normal 
 
 
-
 
NC_010505  Mrad2831_4669  MucR family transcriptional regulator  52.59 
 
 
169 aa  138  3e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_4474  ROSMUCR transcriptional regulator  53.6 
 
 
176 aa  137  6e-32  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2057  transcriptional regulator, MucR family  53.57 
 
 
138 aa  137  6e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4938  transcriptional regulator, MucR family  53.6 
 
 
176 aa  137  6e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.686756  normal  0.493177 
 
 
-
 
NC_011887  Mnod_8109  transcriptional regulator, MucR family  55.3 
 
 
173 aa  136  8e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4988  transcriptional regulator, MucR family  54.4 
 
 
177 aa  135  1e-31  Methylobacterium populi BJ001  Bacteria  normal  0.103901  normal  0.173335 
 
 
-
 
NC_009621  Smed_5993  MucR family transcriptional regulator  48.61 
 
 
149 aa  135  2e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0950336 
 
 
-
 
NC_009621  Smed_6025  MucR family transcriptional regulator  51.13 
 
 
148 aa  135  2e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0116577 
 
 
-
 
NC_010505  Mrad2831_3912  MucR family transcriptional regulator  53.24 
 
 
137 aa  135  2e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.913011  normal  0.1317 
 
 
-
 
NC_009621  Smed_6057  MucR family transcriptional regulator  50.37 
 
 
151 aa  135  2e-31  Sinorhizobium medicae WSM419  Bacteria  normal  0.320123  normal 
 
 
-
 
NC_007958  RPD_1940  MucR family transcriptional regulator  55.56 
 
 
138 aa  134  3e-31  Rhodopseudomonas palustris BisB5  Bacteria  decreased coverage  0.00262472  normal  0.275978 
 
 
-
 
NC_011757  Mchl_5240  transcriptional regulator, MucR family  54.84 
 
 
175 aa  135  3e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.672182 
 
 
-
 
NC_010172  Mext_4773  ROSMUCR transcriptional regulator  54.84 
 
 
175 aa  134  3e-31  Methylobacterium extorquens PA1  Bacteria  normal  0.494992  normal 
 
 
-
 
NC_011757  Mchl_0466  transcriptional regulator, MucR family  54.89 
 
 
145 aa  134  4e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.138143 
 
 
-
 
NC_010172  Mext_0432  ROSMUCR transcriptional regulator  54.89 
 
 
145 aa  134  4e-31  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009622  Smed_6371  MucR family transcriptional regulator  49.63 
 
 
137 aa  134  6e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4422  MucR family transcriptional regulator  55.3 
 
 
145 aa  134  6e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.705801 
 
 
-
 
NC_011894  Mnod_6343  transcriptional regulator, MucR family  53.73 
 
 
189 aa  134  6e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_5176  MucR family transcriptional regulator  53.72 
 
 
190 aa  133  9e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0503  transcriptional regulator, MucR family  54.81 
 
 
145 aa  133  1e-30  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0293653 
 
 
-
 
NC_009720  Xaut_1838  MucR family transcriptional regulator  52.27 
 
 
155 aa  132  2e-30  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0743894  normal  0.315346 
 
 
-
 
NC_010511  M446_1889  MucR family transcriptional regulator  54.2 
 
 
156 aa  132  2e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0270  transcriptional regulator, MucR family  55.12 
 
 
153 aa  131  3e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5564  MucR family transcriptional regulator  53.44 
 
 
156 aa  131  3e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0170  ROSMUCR transcriptional regulator  55.2 
 
 
186 aa  130  5e-30  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1517  MucR family transcriptional regulator  50.85 
 
 
160 aa  130  6e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.400145  normal  0.0460522 
 
 
-
 
NC_011757  Mchl_0082  transcriptional regulator, MucR family  52.24 
 
 
197 aa  130  6e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.288227  normal 
 
 
-
 
NC_011894  Mnod_2365  transcriptional regulator, MucR family  56.2 
 
 
176 aa  130  8e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2842  MucR family transcriptional regulator  52.17 
 
 
139 aa  130  8e-30  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.840232 
 
 
-
 
NC_010511  M446_1153  MucR family transcriptional regulator  53.79 
 
 
174 aa  129  9e-30  Methylobacterium sp. 4-46  Bacteria  normal  0.877039  normal 
 
 
-
 
NC_007778  RPB_3519  MucR family transcriptional regulator  53.97 
 
 
139 aa  129  9e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.409098  normal  0.722255 
 
 
-
 
NC_010511  M446_6743  MucR family transcriptional regulator  54.33 
 
 
156 aa  130  9e-30  Methylobacterium sp. 4-46  Bacteria  normal  0.328928  normal  0.300512 
 
 
-
 
NC_011367  Gdia_3574  transcriptional regulator, MucR family  58.33 
 
 
185 aa  129  1e-29  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0283517  n/a   
 
 
-
 
NC_011894  Mnod_0068  transcriptional regulator, MucR family  57.85 
 
 
174 aa  129  1e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3787  ROSMUCR transcriptional regulator  50 
 
 
140 aa  129  1e-29  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4157  transcriptional regulator, MucR family  57.63 
 
 
141 aa  129  1e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.157923  n/a   
 
 
-
 
NC_011894  Mnod_3505  transcriptional regulator, MucR family  55 
 
 
174 aa  129  2e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2627  MucR family transcriptional regulator  49.3 
 
 
137 aa  128  2e-29  Nitrobacter hamburgensis X14  Bacteria  normal  0.337964  n/a   
 
 
-
 
NC_007406  Nwi_2227  ROSMUCR transcriptional regulator  48.59 
 
 
137 aa  128  2e-29  Nitrobacter winogradskyi Nb-255  Bacteria  decreased coverage  6.58566e-05  normal 
 
 
-
 
NC_011894  Mnod_3902  transcriptional regulator, MucR family  53.72 
 
 
172 aa  128  3e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0871  MucR family transcriptional regulator  57.14 
 
 
138 aa  128  3e-29  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4896  MucR family transcriptional regulator  53.33 
 
 
180 aa  127  5e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.127609  hitchhiker  0.00352911 
 
 
-
 
NC_007643  Rru_A3766  MucR family transcriptional regulator  53.97 
 
 
140 aa  127  5e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5627  transcriptional regulator, MucR family  54.17 
 
 
174 aa  127  6e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.698408  n/a   
 
 
-
 
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