More than 300 homologs were found in PanDaTox collection
for query gene Mmwyl1_0962 on replicon NC_009654
Organism: Marinomonas sp. MWYL1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009654  Mmwyl1_0962  response regulator receiver protein  100 
 
 
304 aa  617  1e-176  Marinomonas sp. MWYL1  Bacteria  normal  0.512477  normal 
 
 
-
 
NC_008740  Maqu_3869  response regulator receiver protein  52.65 
 
 
301 aa  312  3.9999999999999997e-84  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2977  response regulator receiver domain-containing protein  52.51 
 
 
303 aa  308  8e-83  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.13601 
 
 
-
 
NC_009485  BBta_0652  two component LuxR family transcriptional regulator  52.16 
 
 
305 aa  292  6e-78  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0800453  normal  0.813173 
 
 
-
 
NC_010581  Bind_0974  two component LuxR family transcriptional regulator  48.21 
 
 
309 aa  288  1e-76  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.883175  normal  0.426964 
 
 
-
 
NC_007778  RPB_1250  two component LuxR family transcriptional regulator  51.19 
 
 
309 aa  280  2e-74  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886948  normal 
 
 
-
 
NC_007958  RPD_3866  response regulator receiver  50.85 
 
 
309 aa  278  1e-73  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.370865  normal 
 
 
-
 
NC_011138  MADE_00878  two-component response regulator  46.15 
 
 
298 aa  277  2e-73  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1441  two component transcriptional regulator, LuxR family  52.23 
 
 
308 aa  277  2e-73  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3066  two component transcriptional regulator, LuxR family  48.84 
 
 
305 aa  276  4e-73  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0591  two component LuxR family transcriptional regulator  49.84 
 
 
301 aa  274  2.0000000000000002e-72  Methylobacterium sp. 4-46  Bacteria  normal  0.477799  hitchhiker  0.00469436 
 
 
-
 
NC_008709  Ping_2984  two component transcriptional regulator, LuxR family protein  47.57 
 
 
295 aa  272  7e-72  Psychromonas ingrahamii 37  Bacteria  normal  0.43543  normal  0.546259 
 
 
-
 
NC_009620  Smed_4179  response regulator receiver protein  48.5 
 
 
309 aa  270  2e-71  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.15819 
 
 
-
 
NC_012850  Rleg_3321  two component transcriptional regulator, LuxR family  48.36 
 
 
305 aa  269  5e-71  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.536368 
 
 
-
 
NC_010725  Mpop_3574  two component transcriptional regulator, LuxR family  51.16 
 
 
301 aa  263  2e-69  Methylobacterium populi BJ001  Bacteria  normal  0.0249095  normal 
 
 
-
 
NC_011989  Avi_3499  transcriptional regulator LuxR family  47.49 
 
 
312 aa  261  1e-68  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3692  two component transcriptional regulator, LuxR family  49.19 
 
 
300 aa  259  3e-68  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.170876  normal 
 
 
-
 
NC_010172  Mext_3383  response regulator receiver  49.19 
 
 
300 aa  259  4e-68  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2002  two component transcriptional regulator, LuxR family  45.03 
 
 
306 aa  257  2e-67  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010505  Mrad2831_5514  two component LuxR family transcriptional regulator  50 
 
 
305 aa  252  6e-66  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.211273 
 
 
-
 
NC_008825  Mpe_A0671  two component LuxR family transcriptional regulator  44.92 
 
 
333 aa  246  4.9999999999999997e-64  Methylibium petroleiphilum PM1  Bacteria  normal  0.0205263  normal 
 
 
-
 
NC_007794  Saro_1665  two component LuxR family transcriptional regulator  43.6 
 
 
307 aa  238  1e-61  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3585  two component LuxR family transcriptional regulator  44.78 
 
 
306 aa  228  1e-58  Methylibium petroleiphilum PM1  Bacteria  normal  0.295986  normal 
 
 
-
 
NC_013422  Hneap_1587  two component transcriptional regulator, LuxR family  42.91 
 
 
292 aa  225  8e-58  Halothiobacillus neapolitanus c2  Bacteria  normal  0.522901  n/a   
 
 
-
 
NC_007908  Rfer_3397  two component LuxR family transcriptional regulator  44.13 
 
 
328 aa  223  2e-57  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1083  two component LuxR family transcriptional regulator  41.97 
 
 
316 aa  221  9e-57  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010002  Daci_0218  two component LuxR family transcriptional regulator  41.56 
 
 
339 aa  219  3e-56  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_1354  two component LuxR family transcriptional regulator  42.28 
 
 
349 aa  219  3.9999999999999997e-56  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4238  two component transcriptional regulator, LuxR family  40.96 
 
 
356 aa  219  3.9999999999999997e-56  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0979  response regulator receiver protein  41.8 
 
 
336 aa  219  5e-56  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1761  two component LuxR family transcriptional regulator  43.05 
 
 
311 aa  218  7.999999999999999e-56  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1445  two component LuxR family transcriptional regulator  44.7 
 
 
308 aa  217  2e-55  Dechloromonas aromatica RCB  Bacteria  normal  0.446624  normal 
 
 
-
 
NC_007948  Bpro_0562  two component LuxR family transcriptional regulator  42.52 
 
 
297 aa  214  9.999999999999999e-55  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3147  two component transcriptional regulator, LuxR family  43.05 
 
 
302 aa  211  7.999999999999999e-54  Variovorax paradoxus S110  Bacteria  normal  0.235206  n/a   
 
 
-
 
NC_008786  Veis_1731  response regulator receiver protein  40.12 
 
 
361 aa  210  3e-53  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.319975 
 
 
-
 
NC_008752  Aave_3524  two component LuxR family transcriptional regulator  40.12 
 
 
353 aa  202  4e-51  Acidovorax citrulli AAC00-1  Bacteria  normal  0.406085  normal  0.428998 
 
 
-
 
NC_007952  Bxe_B1713  two component LuxR family transcriptional regulator  37.42 
 
 
361 aa  201  9.999999999999999e-51  Burkholderia xenovorans LB400  Bacteria  normal  0.310925  normal 
 
 
-
 
NC_010515  Bcenmc03_5666  two component LuxR family transcriptional regulator  37.54 
 
 
312 aa  198  1.0000000000000001e-49  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.917296 
 
 
-
 
NC_008061  Bcen_3730  two component LuxR family transcriptional regulator  37.54 
 
 
312 aa  196  3e-49  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4638  two component LuxR family transcriptional regulator  37.54 
 
 
312 aa  196  3e-49  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  36.83 
 
 
301 aa  177  3e-43  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  52.99 
 
 
222 aa  148  1.0000000000000001e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  51.94 
 
 
452 aa  139  4.999999999999999e-32  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  50.76 
 
 
337 aa  139  6e-32  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  52.46 
 
 
397 aa  136  3.0000000000000003e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_011831  Cagg_1006  response regulator receiver modulated diguanylate cyclase  42.95 
 
 
312 aa  130  4.0000000000000003e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010627  Bphy_7700  multi-sensor signal transduction histidine kinase  53.78 
 
 
541 aa  129  5.0000000000000004e-29  Burkholderia phymatum STM815  Bacteria  normal  0.163324  normal  0.507763 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  45.32 
 
 
367 aa  129  8.000000000000001e-29  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  44.19 
 
 
407 aa  128  1.0000000000000001e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.142048 
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  46.32 
 
 
488 aa  128  1.0000000000000001e-28  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.182398 
 
 
-
 
NC_008312  Tery_4155  response regulator receiver sensor signal transduction histidine kinase  48.06 
 
 
440 aa  128  1.0000000000000001e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.50715  normal 
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  47.06 
 
 
566 aa  128  2.0000000000000002e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal 
 
 
-
 
NC_010625  Bphy_6559  multi-sensor signal transduction histidine kinase  51.67 
 
 
541 aa  127  2.0000000000000002e-28  Burkholderia phymatum STM815  Bacteria  normal  normal  0.59439 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  48.36 
 
 
437 aa  125  6e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2397  two component transcriptional regulator, AraC family  50 
 
 
269 aa  124  2e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  0.92999  normal  0.351016 
 
 
-
 
NC_014248  Aazo_4465  response regulator receiver sensor signal transduction histidine kinase  46.62 
 
 
437 aa  124  2e-27  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3134  response regulator receiver protein  44.1 
 
 
200 aa  123  3e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  49.59 
 
 
395 aa  122  5e-27  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_010551  BamMC406_1236  response regulator receiver sensor signal transduction histidine kinase  49.15 
 
 
386 aa  122  9.999999999999999e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  0.493129  normal 
 
 
-
 
NC_013161  Cyan8802_1380  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  37.43 
 
 
715 aa  121  9.999999999999999e-27  Cyanothece sp. PCC 8802  Bacteria  normal  0.923401  normal 
 
 
-
 
NC_011726  PCC8801_1350  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  37.43 
 
 
715 aa  121  9.999999999999999e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010676  Bphyt_6236  multi-sensor signal transduction histidine kinase  48.72 
 
 
553 aa  120  1.9999999999999998e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.914679 
 
 
-
 
NC_010623  Bphy_4530  response regulator receiver sensor signal transduction histidine kinase  49.15 
 
 
386 aa  121  1.9999999999999998e-26  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7377  two component AraC family transcriptional regulator  46.56 
 
 
278 aa  120  3.9999999999999996e-26  Burkholderia sp. 383  Bacteria  normal  0.0377301  normal  0.284562 
 
 
-
 
NC_007413  Ava_4136  response regulator receiver Signal transduction histidine kinase  45.24 
 
 
440 aa  119  4.9999999999999996e-26  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000660181  hitchhiker  0.00876613 
 
 
-
 
NC_012918  GM21_3242  response regulator receiver sensor signal transduction histidine kinase  42.65 
 
 
441 aa  119  6e-26  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1018  response regulator receiver sensor signal transduction histidine kinase  42.11 
 
 
441 aa  118  9.999999999999999e-26  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00729938  n/a   
 
 
-
 
NC_010557  BamMC406_6071  two component AraC family transcriptional regulator  46.67 
 
 
271 aa  117  1.9999999999999998e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6368  two component AraC family transcriptional regulator  46.67 
 
 
271 aa  117  1.9999999999999998e-25  Burkholderia ambifaria AMMD  Bacteria  normal  0.434467  normal 
 
 
-
 
NC_010557  BamMC406_5929  two component AraC family transcriptional regulator  45.8 
 
 
277 aa  117  1.9999999999999998e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  0.473719  normal 
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  35.55 
 
 
374 aa  117  3e-25  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  35.55 
 
 
374 aa  117  3e-25  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6198  two component AraC family transcriptional regulator  45.04 
 
 
277 aa  117  3e-25  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6350  two component AraC family transcriptional regulator  46.67 
 
 
271 aa  116  3.9999999999999997e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.787195  normal  0.900493 
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  46.34 
 
 
349 aa  116  3.9999999999999997e-25  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_6528  two component AraC family transcriptional regulator  46.67 
 
 
271 aa  116  3.9999999999999997e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.485144  n/a   
 
 
-
 
NC_008544  Bcen2424_6762  two component AraC family transcriptional regulator  46.67 
 
 
271 aa  116  3.9999999999999997e-25  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.295507 
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  44.03 
 
 
443 aa  116  5e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.394463 
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  42.22 
 
 
384 aa  115  1.0000000000000001e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_007517  Gmet_2999  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  36.52 
 
 
361 aa  115  1.0000000000000001e-24  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.669597 
 
 
-
 
NC_009523  RoseRS_2347  response regulator receiver protein  42.41 
 
 
202 aa  115  1.0000000000000001e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.56815  normal 
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  41.48 
 
 
363 aa  115  1.0000000000000001e-24  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  43.97 
 
 
314 aa  115  1.0000000000000001e-24  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  49.14 
 
 
369 aa  115  1.0000000000000001e-24  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  47.93 
 
 
328 aa  114  2.0000000000000002e-24  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  43.85 
 
 
395 aa  113  3e-24  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal 
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  43.85 
 
 
395 aa  113  3e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  47.06 
 
 
231 aa  113  3e-24  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0124  response regulator receiver Signal transduction histidine kinase  48.21 
 
 
470 aa  113  4.0000000000000004e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  44.85 
 
 
383 aa  113  5e-24  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  36.84 
 
 
308 aa  112  6e-24  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  36.84 
 
 
308 aa  112  6e-24  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_2442  response regulator PleD  52.21 
 
 
457 aa  112  7.000000000000001e-24  Nitrobacter hamburgensis X14  Bacteria  normal  0.696702  n/a   
 
 
-
 
NC_011004  Rpal_3541  response regulator PleD  51.33 
 
 
457 aa  112  7.000000000000001e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2062  response regulator receiver protein  44.35 
 
 
217 aa  112  7.000000000000001e-24  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  38.3 
 
 
378 aa  112  7.000000000000001e-24  Opitutus terrae PB90-1  Bacteria  normal  normal  0.215089 
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  47.5 
 
 
358 aa  112  7.000000000000001e-24  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  50.85 
 
 
377 aa  112  8.000000000000001e-24  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_010512  Bcenmc03_6477  two component AraC family transcriptional regulator  44.27 
 
 
277 aa  112  8.000000000000001e-24  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0923467 
 
 
-
 
NC_008544  Bcen2424_5986  two component AraC family transcriptional regulator  44.27 
 
 
277 aa  112  8.000000000000001e-24  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.0117191 
 
 
-
 
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