More than 300 homologs were found in PanDaTox collection
for query gene Mmcs_4085 on replicon NC_008146
Organism: Mycobacterium sp. MCS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  100 
 
 
267 aa  521  1e-147  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  100 
 
 
267 aa  521  1e-147  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  98.5 
 
 
267 aa  514  1.0000000000000001e-145  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  49.81 
 
 
273 aa  244  8e-64  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3244  short-chain dehydrogenase/reductase SDR  43.24 
 
 
262 aa  179  2.9999999999999997e-44  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  43.3 
 
 
259 aa  174  9.999999999999999e-43  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  42.47 
 
 
269 aa  174  9.999999999999999e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  38.91 
 
 
256 aa  169  6e-41  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  36.36 
 
 
264 aa  168  7e-41  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  38.25 
 
 
260 aa  168  8e-41  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_2545  short-chain dehydrogenase/reductase SDR  38.66 
 
 
268 aa  166  2.9999999999999998e-40  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.522448  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  40.57 
 
 
271 aa  165  5.9999999999999996e-40  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  46.96 
 
 
258 aa  165  5.9999999999999996e-40  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  38.96 
 
 
258 aa  164  1.0000000000000001e-39  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_009077  Mjls_3643  short-chain dehydrogenase/reductase SDR  38.81 
 
 
268 aa  164  1.0000000000000001e-39  Mycobacterium sp. JLS  Bacteria  normal  0.129425  normal 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  40.38 
 
 
267 aa  163  2.0000000000000002e-39  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  39.84 
 
 
263 aa  163  3e-39  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  35.8 
 
 
269 aa  163  3e-39  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_008705  Mkms_3711  short-chain dehydrogenase/reductase SDR  38.43 
 
 
268 aa  163  3e-39  Mycobacterium sp. KMS  Bacteria  normal  0.428554  normal 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  41.2 
 
 
266 aa  162  4.0000000000000004e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_008726  Mvan_4098  short-chain dehydrogenase/reductase SDR  38.29 
 
 
268 aa  162  5.0000000000000005e-39  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.230051  normal 
 
 
-
 
NC_014158  Tpau_1341  short-chain dehydrogenase/reductase SDR  39.03 
 
 
268 aa  161  1e-38  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  38.55 
 
 
259 aa  160  1e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  39.69 
 
 
259 aa  161  1e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  38.06 
 
 
262 aa  160  2e-38  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3638  short-chain dehydrogenase/reductase SDR  38.08 
 
 
255 aa  160  2e-38  Mycobacterium sp. MCS  Bacteria  normal  0.125829  n/a   
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  42.23 
 
 
259 aa  160  3e-38  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_009565  TBFG_12531  short-chain type dehydrogenase/reductase  39.25 
 
 
268 aa  159  3e-38  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00342881 
 
 
-
 
NC_013441  Gbro_2014  short-chain dehydrogenase/reductase SDR  40.6 
 
 
268 aa  159  5e-38  Gordonia bronchialis DSM 43247  Bacteria  normal  0.700313  n/a   
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  43.37 
 
 
264 aa  159  5e-38  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  38.78 
 
 
262 aa  159  6e-38  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  40.78 
 
 
259 aa  159  6e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  34.26 
 
 
263 aa  158  7e-38  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  34.8 
 
 
267 aa  158  8e-38  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_010338  Caul_3249  short-chain dehydrogenase/reductase SDR  45.75 
 
 
258 aa  158  1e-37  Caulobacter sp. K31  Bacteria  normal  normal  0.559348 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  40.89 
 
 
266 aa  157  1e-37  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0055  short-chain dehydrogenase/reductase SDR  39.15 
 
 
259 aa  158  1e-37  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  40.5 
 
 
255 aa  157  1e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  39.61 
 
 
262 aa  157  1e-37  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  41.13 
 
 
262 aa  156  4e-37  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  35.98 
 
 
259 aa  155  5.0000000000000005e-37  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  41.13 
 
 
262 aa  155  5.0000000000000005e-37  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  41.13 
 
 
262 aa  155  5.0000000000000005e-37  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  35.97 
 
 
261 aa  155  6e-37  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  40.96 
 
 
258 aa  155  7e-37  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  40.86 
 
 
262 aa  155  9e-37  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  36.22 
 
 
258 aa  154  1e-36  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  34.62 
 
 
264 aa  154  1e-36  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_011666  Msil_1841  short-chain dehydrogenase/reductase SDR  41.09 
 
 
266 aa  154  1e-36  Methylocella silvestris BL2  Bacteria  n/a    normal  0.197421 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  38.98 
 
 
263 aa  154  2e-36  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  35.97 
 
 
261 aa  153  2.9999999999999998e-36  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_014158  Tpau_0582  short-chain dehydrogenase/reductase SDR  39.85 
 
 
266 aa  153  2.9999999999999998e-36  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_4948  short-chain dehydrogenase/reductase SDR  43.15 
 
 
253 aa  152  5.9999999999999996e-36  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.623441 
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  38.1 
 
 
259 aa  152  7e-36  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_009636  Smed_1269  short-chain dehydrogenase/reductase SDR  39.13 
 
 
294 aa  152  7e-36  Sinorhizobium medicae WSM419  Bacteria  normal  0.618635  normal  0.87927 
 
 
-
 
NC_004578  PSPTO_4275  oxidoreductase, short-chain dehydrogenase/reductase family  38.64 
 
 
261 aa  152  8e-36  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  37.55 
 
 
262 aa  151  8.999999999999999e-36  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0445  short-chain dehydrogenase/reductase SDR  38.24 
 
 
267 aa  151  1e-35  Cyanothece sp. PCC 7425  Bacteria  normal  0.810235  normal  0.221701 
 
 
-
 
NC_010717  PXO_01284  dehydrogenase  39.53 
 
 
266 aa  150  2e-35  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  39.27 
 
 
258 aa  149  6e-35  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_5585  short-chain dehydrogenase/reductase SDR  36 
 
 
265 aa  149  7e-35  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.892025  normal  0.853623 
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  40.32 
 
 
250 aa  147  1.0000000000000001e-34  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  39.02 
 
 
275 aa  147  2.0000000000000003e-34  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_009664  Krad_0779  short-chain dehydrogenase/reductase SDR  45.45 
 
 
286 aa  147  2.0000000000000003e-34  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00749167  decreased coverage  0.00042824 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  34.92 
 
 
264 aa  147  3e-34  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_007964  Nham_0606  short-chain dehydrogenase/reductase SDR  39.53 
 
 
256 aa  146  3e-34  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  35.66 
 
 
267 aa  146  4.0000000000000006e-34  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_008262  CPR_2585  short chain dehydrogenase/reductase family oxidoreductase  32.8 
 
 
257 aa  146  4.0000000000000006e-34  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  38.06 
 
 
258 aa  145  5e-34  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3849  short-chain dehydrogenase/reductase SDR  40.75 
 
 
292 aa  145  5e-34  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.858349  n/a   
 
 
-
 
NC_013235  Namu_5163  short-chain dehydrogenase/reductase SDR  41.2 
 
 
258 aa  145  5e-34  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  33.46 
 
 
260 aa  145  8.000000000000001e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007406  Nwi_0477  short-chain dehydrogenase/reductase SDR  41.3 
 
 
256 aa  144  1e-33  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  30.56 
 
 
257 aa  144  1e-33  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_011145  AnaeK_3912  short-chain dehydrogenase/reductase SDR  40.75 
 
 
266 aa  144  2e-33  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  39.75 
 
 
283 aa  142  5e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3300  short-chain dehydrogenase/reductase SDR  39.59 
 
 
272 aa  142  5e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  0.605078  normal  0.514892 
 
 
-
 
NC_006369  lpl1378  hypothetical protein  32.42 
 
 
259 aa  142  6e-33  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_4202  short-chain dehydrogenase/reductase SDR  33.85 
 
 
344 aa  141  9e-33  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  36.22 
 
 
261 aa  141  9.999999999999999e-33  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp1382  hypothetical protein  32.03 
 
 
259 aa  140  1.9999999999999998e-32  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010338  Caul_4770  short-chain dehydrogenase/reductase SDR  37.15 
 
 
266 aa  140  1.9999999999999998e-32  Caulobacter sp. K31  Bacteria  normal  normal  0.228735 
 
 
-
 
NC_008261  CPF_2906  short chain dehydrogenase/reductase family oxidoreductase  32.11 
 
 
257 aa  140  1.9999999999999998e-32  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  37.94 
 
 
275 aa  140  1.9999999999999998e-32  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_011891  A2cp1_3990  short-chain dehydrogenase/reductase SDR  40.38 
 
 
266 aa  140  1.9999999999999998e-32  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3398  short-chain dehydrogenase/reductase SDR  43.46 
 
 
265 aa  140  3e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.162957 
 
 
-
 
NC_010571  Oter_2864  short-chain dehydrogenase/reductase SDR  35.69 
 
 
289 aa  139  3.9999999999999997e-32  Opitutus terrae PB90-1  Bacteria  normal  normal  0.327148 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  41.38 
 
 
281 aa  139  4.999999999999999e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  41.38 
 
 
281 aa  139  4.999999999999999e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  37.75 
 
 
259 aa  139  7e-32  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_009953  Sare_1619  short-chain dehydrogenase/reductase SDR  39.92 
 
 
271 aa  138  1e-31  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.61951 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  39.02 
 
 
252 aa  138  1e-31  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_008254  Meso_3522  short-chain dehydrogenase/reductase SDR  34.26 
 
 
289 aa  137  1e-31  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  43.03 
 
 
276 aa  138  1e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  39.76 
 
 
266 aa  137  2e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0666  short-chain dehydrogenase/reductase SDR  37.83 
 
 
343 aa  137  2e-31  Eggerthella lenta DSM 2243  Bacteria  normal  0.019294  hitchhiker  0.000464867 
 
 
-
 
NC_013203  Apar_0041  short-chain dehydrogenase/reductase SDR  36.18 
 
 
257 aa  136  3.0000000000000003e-31  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0497  short-chain dehydrogenase/reductase SDR  33.33 
 
 
360 aa  136  3.0000000000000003e-31  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_6133  short-chain dehydrogenase/reductase SDR  34.31 
 
 
263 aa  136  4e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  39.22 
 
 
266 aa  135  5e-31  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
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