More than 300 homologs were found in PanDaTox collection
for query gene Mmcs_0044 on replicon NC_008146
Organism: Mycobacterium sp. MCS



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008705  Mkms_0053  short-chain dehydrogenase/reductase SDR  100 
 
 
270 aa  540  1e-152  Mycobacterium sp. KMS  Bacteria  normal  0.0110329  normal  0.0245266 
 
 
-
 
NC_008146  Mmcs_0044  short-chain dehydrogenase/reductase SDR  100 
 
 
270 aa  540  1e-152  Mycobacterium sp. MCS  Bacteria  normal  0.442455  n/a   
 
 
-
 
NC_009077  Mjls_0034  short-chain dehydrogenase/reductase SDR  98.89 
 
 
270 aa  536  1e-151  Mycobacterium sp. JLS  Bacteria  normal  normal  0.155625 
 
 
-
 
NC_009338  Mflv_2380  short-chain dehydrogenase/reductase SDR  67.29 
 
 
271 aa  350  2e-95  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7149  short-chain dehydrogenase/reductase SDR  47.64 
 
 
265 aa  224  8e-58  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0163274 
 
 
-
 
NC_013510  Tcur_3511  short-chain dehydrogenase/reductase SDR  42.06 
 
 
264 aa  188  8e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  0.531457  n/a   
 
 
-
 
NC_009338  Mflv_4545  short-chain dehydrogenase/reductase SDR  43.4 
 
 
261 aa  178  9e-44  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.384179 
 
 
-
 
NC_009077  Mjls_0285  short-chain dehydrogenase/reductase SDR  39.25 
 
 
264 aa  177  2e-43  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_0304  short-chain dehydrogenase/reductase SDR  38.87 
 
 
264 aa  176  3e-43  Mycobacterium sp. KMS  Bacteria  normal  normal  0.20364 
 
 
-
 
NC_008146  Mmcs_0294  short-chain dehydrogenase/reductase SDR  38.87 
 
 
264 aa  176  3e-43  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_1940  short-chain dehydrogenase/reductase SDR  40.76 
 
 
275 aa  173  3e-42  Caulobacter sp. K31  Bacteria  normal  0.320564  normal 
 
 
-
 
NC_009921  Franean1_1909  short-chain dehydrogenase/reductase SDR  38.85 
 
 
256 aa  170  2e-41  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2633  short-chain dehydrogenase/reductase SDR  43.97 
 
 
276 aa  157  2e-37  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.364215  normal 
 
 
-
 
NC_008009  Acid345_3576  short-chain dehydrogenase/reductase SDR  33.06 
 
 
276 aa  132  5e-30  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2996  short-chain dehydrogenase/reductase SDR  40.58 
 
 
268 aa  131  1e-29  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.056073 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  33.59 
 
 
261 aa  126  3e-28  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  7.6045e-07 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  33.21 
 
 
261 aa  124  2e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_6445  short-chain dehydrogenase/reductase SDR  36.81 
 
 
272 aa  123  3e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  31.44 
 
 
255 aa  114  2e-24  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  40.43 
 
 
262 aa  112  9e-24  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  40.96 
 
 
262 aa  111  1e-23  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  40.96 
 
 
262 aa  111  1e-23  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  40.54 
 
 
266 aa  110  2e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  35.65 
 
 
271 aa  110  3e-23  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  34.85 
 
 
291 aa  108  7e-23  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  33.51 
 
 
264 aa  107  2e-22  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_014151  Cfla_2980  short-chain dehydrogenase/reductase SDR  37.08 
 
 
271 aa  105  5e-22  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  34.16 
 
 
262 aa  105  9e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_008705  Mkms_3711  short-chain dehydrogenase/reductase SDR  38.89 
 
 
268 aa  102  7e-21  Mycobacterium sp. KMS  Bacteria  normal  0.428554  normal 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  35.79 
 
 
258 aa  102  7e-21  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3643  short-chain dehydrogenase/reductase SDR  38.89 
 
 
268 aa  102  9e-21  Mycobacterium sp. JLS  Bacteria  normal  0.129425  normal 
 
 
-
 
NC_009046  PICST_79198  beta-hydroxysteroid dehydrogenase type 3  31.16 
 
 
346 aa  100  2e-20  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.103283  normal 
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  32.06 
 
 
275 aa  100  2e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  31.16 
 
 
273 aa  100  2e-20  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  30.59 
 
 
258 aa  99.8  4e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  36.23 
 
 
255 aa  99.8  4e-20  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  32.61 
 
 
260 aa  99.8  5e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  34.74 
 
 
258 aa  99.8  5e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  39.29 
 
 
270 aa  99.4  5e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  38.5 
 
 
264 aa  99.4  6e-20  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4948  short-chain dehydrogenase/reductase SDR  34.86 
 
 
253 aa  99.4  6e-20  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.623441 
 
 
-
 
NC_013132  Cpin_5008  short-chain dehydrogenase/reductase SDR  30.17 
 
 
298 aa  99.4  6e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0468951  hitchhiker  0.00252787 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  36.96 
 
 
262 aa  99  7e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  37.5 
 
 
262 aa  99  7e-20  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  37.91 
 
 
258 aa  99  8e-20  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  37.3 
 
 
262 aa  98.6  9e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3638  short-chain dehydrogenase/reductase SDR  37.76 
 
 
255 aa  98.2  1e-19  Mycobacterium sp. MCS  Bacteria  normal  0.125829  n/a   
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  33.46 
 
 
259 aa  98.6  1e-19  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  36.96 
 
 
263 aa  98.6  1e-19  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  37.3 
 
 
262 aa  97.4  2e-19  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  36.22 
 
 
271 aa  97.4  2e-19  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_2014  short-chain dehydrogenase/reductase SDR  36.7 
 
 
268 aa  96.7  3e-19  Gordonia bronchialis DSM 43247  Bacteria  normal  0.700313  n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  34.02 
 
 
262 aa  96.7  3e-19  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_4098  short-chain dehydrogenase/reductase SDR  37.63 
 
 
268 aa  96.7  4e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.230051  normal 
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  32.06 
 
 
275 aa  95.9  5e-19  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  29.61 
 
 
264 aa  95.9  6e-19  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_010831  Cphamn1_0312  short-chain dehydrogenase/reductase SDR  33.16 
 
 
261 aa  95.1  1e-18  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  1.13464e-05  decreased coverage  0.000120518 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  31.68 
 
 
266 aa  94  2e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  2.29698e-08 
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  36.76 
 
 
262 aa  94.4  2e-18  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0462  short-chain dehydrogenase/reductase SDR  38.86 
 
 
260 aa  94  2e-18  Pseudomonas putida F1  Bacteria  normal  0.767614  hitchhiker  0.00534124 
 
 
-
 
NC_002947  PP_0429  short chain dehydrogenase/reductase family oxidoreductase  38.86 
 
 
260 aa  94  2e-18  Pseudomonas putida KT2440  Bacteria  normal  normal  0.406504 
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  35.91 
 
 
267 aa  93.6  3e-18  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
BN001301  ANIA_05861  3-ketoacyl-CoA reductase (3-ketoreductase)(KAR)(EC 1.1.1.-)(Microsomal beta-keto-reductase) [Source:UniProtKB/Swiss-Prot;Acc:Q5B0R9]  33.52 
 
 
346 aa  94  3e-18  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0426828  normal  0.51731 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  37.63 
 
 
258 aa  93.6  3e-18  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  39.46 
 
 
269 aa  93.6  3e-18  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_009565  TBFG_12531  short-chain type dehydrogenase/reductase  37.63 
 
 
268 aa  93.6  3e-18  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00342881 
 
 
-
 
NC_013730  Slin_4202  short-chain dehydrogenase/reductase SDR  30.67 
 
 
344 aa  93.6  3e-18  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0459  short-chain dehydrogenase/reductase SDR  38.29 
 
 
260 aa  93.2  4e-18  Pseudomonas putida GB-1  Bacteria  normal  normal  0.240703 
 
 
-
 
NC_014158  Tpau_1341  short-chain dehydrogenase/reductase SDR  35.68 
 
 
268 aa  93.2  4e-18  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  36.22 
 
 
262 aa  92.8  5e-18  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  35.68 
 
 
264 aa  92.8  5e-18  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  35.68 
 
 
264 aa  92.8  6e-18  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  32.23 
 
 
281 aa  92.4  7e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  41.08 
 
 
262 aa  92.4  7e-18  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  32.23 
 
 
281 aa  92.4  7e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  33.5 
 
 
266 aa  92.4  7e-18  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_011670  PHATRDRAFT_25360  short-chain dehydrogenase/reductase acting with NAD or NADP as acceptor  30.56 
 
 
327 aa  92.4  7e-18  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.421024  n/a   
 
 
-
 
NC_013131  Caci_8914  short-chain dehydrogenase/reductase SDR  36.84 
 
 
255 aa  92  8e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.505504 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  34.95 
 
 
269 aa  92.4  8e-18  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_009338  Mflv_2545  short-chain dehydrogenase/reductase SDR  38.17 
 
 
268 aa  92  9e-18  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.522448  normal 
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  34.86 
 
 
260 aa  92  9e-18  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
BN001305  ANIA_08398  conserved hypothetical protein  34.73 
 
 
364 aa  91.7  1e-17  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  30.6 
 
 
256 aa  91.7  1e-17  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  34.78 
 
 
264 aa  91.7  1e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  37.57 
 
 
263 aa  90.9  2e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_010501  PputW619_4774  short-chain dehydrogenase/reductase SDR  38.29 
 
 
260 aa  90.9  2e-17  Pseudomonas putida W619  Bacteria  normal  normal  0.45506 
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  39.46 
 
 
266 aa  91.3  2e-17  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  32.32 
 
 
266 aa  90.5  3e-17  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  33.33 
 
 
264 aa  90.1  3e-17  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  32.43 
 
 
259 aa  89.7  4e-17  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  39.16 
 
 
269 aa  90.1  4e-17  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_007512  Plut_1969  short chain dehydrogenase/reductase family oxidoreductase  34.97 
 
 
260 aa  89.4  6e-17  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2686  short-chain dehydrogenase/reductase SDR  34.01 
 
 
258 aa  89  8e-17  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00673203  n/a   
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  35.16 
 
 
262 aa  89  8e-17  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  35.14 
 
 
269 aa  88.6  9e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  35.14 
 
 
259 aa  88.2  1e-16  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  32.97 
 
 
285 aa  88.2  1e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  31.09 
 
 
265 aa  88.6  1e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  33 
 
 
266 aa  88.6  1e-16  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  31.28 
 
 
266 aa  87.4  2e-16  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
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