More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_1491 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_1491  two component transcriptional regulator  100 
 
 
236 aa  474  1e-133  Magnetococcus sp. MC-1  Bacteria  normal  decreased coverage  0.00391258 
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  63.48 
 
 
243 aa  298  5e-80  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal 
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  57.02 
 
 
235 aa  271  5.000000000000001e-72  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.203788 
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  56.44 
 
 
230 aa  254  1.0000000000000001e-66  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  55.56 
 
 
230 aa  250  1e-65  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  54.22 
 
 
230 aa  247  1e-64  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  53.33 
 
 
231 aa  244  8e-64  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.777838 
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  55.56 
 
 
226 aa  244  9.999999999999999e-64  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  52.68 
 
 
226 aa  242  3.9999999999999997e-63  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  52.44 
 
 
225 aa  241  7e-63  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_008639  Cpha266_0880  two component transcriptional regulator  52.7 
 
 
236 aa  240  1e-62  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  52.44 
 
 
225 aa  240  2e-62  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  50.43 
 
 
236 aa  239  2.9999999999999997e-62  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  54.71 
 
 
225 aa  239  2.9999999999999997e-62  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  51.8 
 
 
236 aa  239  4e-62  Chlorobium phaeobacteroides BS1  Bacteria  normal  decreased coverage  0.0000906935 
 
 
-
 
NC_010803  Clim_0772  two component transcriptional regulator, winged helix family  51.33 
 
 
233 aa  236  2e-61  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  52 
 
 
227 aa  236  2e-61  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal 
 
 
-
 
NC_008609  Ppro_3155  two component transcriptional regulator  52.21 
 
 
228 aa  235  6e-61  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  52.47 
 
 
226 aa  234  7e-61  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  53.54 
 
 
225 aa  234  9e-61  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  53.54 
 
 
225 aa  233  1.0000000000000001e-60  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  53.74 
 
 
230 aa  233  2.0000000000000002e-60  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  52.44 
 
 
226 aa  232  4.0000000000000004e-60  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.575064 
 
 
-
 
NC_007512  Plut_0632  two component transcriptional regulator  48.7 
 
 
236 aa  228  8e-59  Chlorobium luteolum DSM 273  Bacteria  normal  0.883969  normal 
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  53.1 
 
 
229 aa  228  9e-59  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_011060  Ppha_1701  two component transcriptional regulator, winged helix family  48.44 
 
 
236 aa  224  1e-57  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0435  two component transcriptional regulator  47.41 
 
 
253 aa  224  1e-57  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.583358  n/a   
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  52.47 
 
 
227 aa  223  2e-57  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  52.44 
 
 
229 aa  221  8e-57  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.258551 
 
 
-
 
NC_007520  Tcr_0541  two component transcriptional regulator  49.55 
 
 
230 aa  215  5e-55  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2556  two component transcriptional regulator  51.11 
 
 
225 aa  214  9.999999999999999e-55  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000044969  n/a   
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  46.7 
 
 
231 aa  213  1.9999999999999998e-54  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  51.53 
 
 
225 aa  213  2.9999999999999995e-54  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  49.12 
 
 
230 aa  211  1e-53  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_2550  two component transcriptional regulator  47.79 
 
 
228 aa  206  2e-52  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0605198 
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  48.68 
 
 
230 aa  206  2e-52  Caulobacter sp. K31  Bacteria  normal  normal  0.281853 
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  49.12 
 
 
226 aa  206  3e-52  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_003910  CPS_1208  phosphate regulon response regulator PhoB  44.59 
 
 
233 aa  205  5e-52  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2401  phosphate regulon transcriptional regulatory protein phoB  46.32 
 
 
229 aa  204  1e-51  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3303  two component transcriptional regulator  45.02 
 
 
229 aa  203  1e-51  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000702519  hitchhiker  0.00000106408 
 
 
-
 
NC_007406  Nwi_0511  phosphate regulon transcriptional regulatory protein phoB  47.58 
 
 
234 aa  203  2e-51  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.473137 
 
 
-
 
NC_007964  Nham_0640  two component transcriptional regulator  46.75 
 
 
233 aa  203  2e-51  Nitrobacter hamburgensis X14  Bacteria  normal  0.772339  n/a   
 
 
-
 
NC_009457  VC0395_A0253  DNA-binding response regulator PhoB  47.37 
 
 
229 aa  202  3e-51  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2367  two component transcriptional regulator  46.26 
 
 
235 aa  202  4e-51  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01026  response regulator  47.37 
 
 
229 aa  202  5e-51  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  41.2 
 
 
238 aa  201  7e-51  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  46.9 
 
 
272 aa  200  9.999999999999999e-51  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal 
 
 
-
 
NC_010725  Mpop_5257  two component transcriptional regulator, winged helix family  50 
 
 
234 aa  201  9.999999999999999e-51  Methylobacterium populi BJ001  Bacteria  normal  0.025536  normal 
 
 
-
 
NC_011666  Msil_0834  two component transcriptional regulator PhoB, winged helix family  50 
 
 
265 aa  201  9.999999999999999e-51  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0108417 
 
 
-
 
NC_008781  Pnap_2201  two component transcriptional regulator  48.21 
 
 
242 aa  201  9.999999999999999e-51  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.153982  normal 
 
 
-
 
NC_011138  MADE_03440  putative DNA-binding response regulator PhoB  45.45 
 
 
229 aa  200  1.9999999999999998e-50  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1491  two component transcriptional regulator PhoB, winged helix family  45.81 
 
 
235 aa  199  3e-50  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0216  two component transcriptional regulator  46.49 
 
 
230 aa  199  3.9999999999999996e-50  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.305183 
 
 
-
 
NC_010172  Mext_4718  phosphate regulon transcriptional regulatory protein PhoB  48.25 
 
 
239 aa  199  3.9999999999999996e-50  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.220817 
 
 
-
 
NC_013456  VEA_004385  phosphate regulon transcriptional regulatory protein PhoB  46.93 
 
 
229 aa  199  3.9999999999999996e-50  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1944  two component transcriptional regulator  44.92 
 
 
238 aa  198  5e-50  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_0489  two component transcriptional regulator  46.93 
 
 
228 aa  198  5e-50  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_5185  two component transcriptional regulator PhoB, winged helix family  48.25 
 
 
234 aa  198  5e-50  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.809056 
 
 
-
 
NC_010506  Swoo_3452  two component transcriptional regulator  45.45 
 
 
229 aa  198  6e-50  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00686704  hitchhiker  0.000158375 
 
 
-
 
NC_009952  Dshi_1538  phosphate regulon transcriptional regulatory protein  47.53 
 
 
228 aa  198  6e-50  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.280381 
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  47.81 
 
 
229 aa  198  6e-50  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  44.35 
 
 
232 aa  198  7e-50  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1053  two component transcriptional regulator  44.74 
 
 
229 aa  198  7e-50  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_00347  DNA-binding response regulator in two-component regulatory system with PhoR (or CreC)  45.02 
 
 
229 aa  197  1.0000000000000001e-49  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3210  two component transcriptional regulator PhoB, winged helix family  45.02 
 
 
229 aa  197  1.0000000000000001e-49  Escherichia coli DH1  Bacteria  normal  0.146413  n/a   
 
 
-
 
NC_002947  PP_5320  winged helix family two component transcriptional regulator  45.09 
 
 
242 aa  197  1.0000000000000001e-49  Pseudomonas putida KT2440  Bacteria  normal  normal  0.023746 
 
 
-
 
NC_009800  EcHS_A0467  transcriptional regulator PhoB  45.02 
 
 
229 aa  197  1.0000000000000001e-49  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00351  hypothetical protein  45.02 
 
 
229 aa  197  1.0000000000000001e-49  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0427  transcriptional regulator PhoB  45.02 
 
 
229 aa  197  1.0000000000000001e-49  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1485  response regulator receiver  46.19 
 
 
235 aa  197  1.0000000000000001e-49  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.236897  n/a   
 
 
-
 
NC_010468  EcolC_3234  transcriptional regulator PhoB  45.02 
 
 
229 aa  197  1.0000000000000001e-49  Escherichia coli ATCC 8739  Bacteria  normal  0.456974  unclonable  0.00000000819474 
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  49.12 
 
 
228 aa  197  1.0000000000000001e-49  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_010658  SbBS512_E0318  transcriptional regulator PhoB  45.02 
 
 
229 aa  197  1.0000000000000001e-49  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2339  two component transcriptional regulator  50.44 
 
 
231 aa  197  1.0000000000000001e-49  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  46.67 
 
 
229 aa  197  1.0000000000000001e-49  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0202  two component transcriptional regulator  47.83 
 
 
233 aa  197  1.0000000000000001e-49  Xanthobacter autotrophicus Py2  Bacteria  normal  0.382528  normal 
 
 
-
 
NC_007802  Jann_2294  two component transcriptional regulator  46.85 
 
 
228 aa  197  1.0000000000000001e-49  Jannaschia sp. CCS1  Bacteria  normal  0.305192  normal 
 
 
-
 
NC_011353  ECH74115_0475  transcriptional regulator PhoB  45.02 
 
 
229 aa  197  1.0000000000000001e-49  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4913  two component transcriptional regulator  46.26 
 
 
231 aa  197  1.0000000000000001e-49  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.121364 
 
 
-
 
NC_010498  EcSMS35_0429  transcriptional regulator PhoB  45.02 
 
 
229 aa  197  1.0000000000000001e-49  Escherichia coli SMS-3-5  Bacteria  normal  0.283039  normal 
 
 
-
 
NC_010501  PputW619_0154  two component transcriptional regulator  45.09 
 
 
229 aa  197  1.0000000000000001e-49  Pseudomonas putida W619  Bacteria  normal  normal  0.596099 
 
 
-
 
NC_011662  Tmz1t_0227  two component transcriptional regulator PhoB, winged helix family  47.37 
 
 
236 aa  197  2.0000000000000003e-49  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2749  two component transcriptional regulator  44.59 
 
 
241 aa  196  2.0000000000000003e-49  Shewanella loihica PV-4  Bacteria  decreased coverage  0.00000593879  unclonable  0.00000330773 
 
 
-
 
NC_013411  GYMC61_0523  two component transcriptional regulator, winged helix family  46.29 
 
 
224 aa  196  2.0000000000000003e-49  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  46.22 
 
 
226 aa  196  2.0000000000000003e-49  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_010322  PputGB1_5367  two component transcriptional regulator  45.09 
 
 
229 aa  197  2.0000000000000003e-49  Pseudomonas putida GB-1  Bacteria  normal  normal  0.400776 
 
 
-
 
NC_009485  BBta_1991  two component transcriptional regulator  45.69 
 
 
235 aa  196  2.0000000000000003e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  43.97 
 
 
234 aa  196  2.0000000000000003e-49  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_009512  Pput_5228  two component transcriptional regulator  45.09 
 
 
229 aa  197  2.0000000000000003e-49  Pseudomonas putida F1  Bacteria  normal  0.661336  normal  0.450139 
 
 
-
 
NC_010184  BcerKBAB4_2492  two component transcriptional regulator  45.29 
 
 
224 aa  196  2.0000000000000003e-49  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.22217  n/a   
 
 
-
 
NC_008700  Sama_1074  response regulator receiver protein  44.59 
 
 
229 aa  196  2.0000000000000003e-49  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000246777  normal  0.491091 
 
 
-
 
NC_008752  Aave_2631  two component transcriptional regulator  46.26 
 
 
235 aa  197  2.0000000000000003e-49  Acidovorax citrulli AAC00-1  Bacteria  normal  0.552533  normal  0.0653315 
 
 
-
 
NC_007925  RPC_4918  two component transcriptional regulator  45.26 
 
 
234 aa  196  3e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.134814 
 
 
-
 
NC_007958  RPD_0893  winged helix family two component transcriptional regulator  45.02 
 
 
233 aa  196  3e-49  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_2232  two component transcriptional regulator, winged helix family protein  43.23 
 
 
227 aa  196  3e-49  Psychromonas ingrahamii 37  Bacteria  normal  0.326614  normal  0.43086 
 
 
-
 
NC_010511  M446_6685  two component transcriptional regulator  48.68 
 
 
234 aa  196  3e-49  Methylobacterium sp. 4-46  Bacteria  normal  0.599421  normal 
 
 
-
 
NC_009439  Pmen_4408  two component transcriptional regulator  44.64 
 
 
229 aa  195  4.0000000000000005e-49  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0897949 
 
 
-
 
NC_007948  Bpro_2257  two component transcriptional regulator  47.53 
 
 
243 aa  196  4.0000000000000005e-49  Polaromonas sp. JS666  Bacteria  normal  0.512842  normal  0.410356 
 
 
-
 
NC_011894  Mnod_7423  two component transcriptional regulator PhoB, winged helix family  48.25 
 
 
234 aa  196  4.0000000000000005e-49  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A2673  DNA-binding response regulator  45.29 
 
 
224 aa  195  4.0000000000000005e-49  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
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