More than 300 homologs were found in PanDaTox collection
for query gene MmarC5_0652 on replicon NC_009135
Organism: Methanococcus maripaludis C5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009635  Maeo_0097  nickel-dependent hydrogenase large subunit  69.56 
 
 
475 aa  704    Methanococcus aeolicus Nankai-3  Archaea  normal  0.325648  n/a   
 
 
-
 
NC_009135  MmarC5_0652  F420-non-reducing hydrogenase subunit A  100 
 
 
471 aa  973    Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0070  nickel-dependent hydrogenase large subunit  90.02 
 
 
471 aa  904    Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_002936  DET0615  hydrogenase, group 3, VhuA subunit, putative  43.63 
 
 
479 aa  416  9.999999999999999e-116  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0588  F420-non-reducing hydrogenase subunit A  43.31 
 
 
479 aa  412  1e-114  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000204108  n/a   
 
 
-
 
NC_013552  DhcVS_553  nickel-dependent hydrogenase, group 3, large subunit  43.72 
 
 
479 aa  414  1e-114  Dehalococcoides sp. VS  Bacteria  normal  0.0139726  n/a   
 
 
-
 
NC_009637  MmarC7_0969  nickel-dependent hydrogenase large subunit  45.73 
 
 
418 aa  400  9.999999999999999e-111  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009135  MmarC5_1712  F420-non-reducing hydrogenase subunit A  45.48 
 
 
418 aa  396  1e-109  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_0977  nickel-dependent hydrogenase large subunit  45.48 
 
 
418 aa  397  1e-109  Methanococcus maripaludis C6  Archaea  normal  0.390644  n/a   
 
 
-
 
NC_009634  Mevan_0996  nickel-dependent hydrogenase large subunit  45.35 
 
 
418 aa  396  1e-109  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_1215  nickel-dependent hydrogenase large subunit  43.13 
 
 
418 aa  386  1e-106  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010424  Daud_1651  nickel-dependent hydrogenase, large subunit  41.94 
 
 
485 aa  383  1e-105  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0078  nickel-dependent hydrogenase large subunit  42.35 
 
 
474 aa  377  1e-103  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1459  nickel-dependent hydrogenase large subunit  42.2 
 
 
504 aa  373  1e-102  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.720227 
 
 
-
 
NC_013223  Dret_2258  nickel-dependent hydrogenase large subunit  40.7 
 
 
486 aa  373  1e-102  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2250  nickel-dependent hydrogenase large subunit  41.54 
 
 
488 aa  369  1e-101  Thauera sp. MZ1T  Bacteria  normal  0.0169608  n/a   
 
 
-
 
NC_013158  Huta_2102  nickel-dependent hydrogenase large subunit  41.86 
 
 
472 aa  363  3e-99  Halorhabdus utahensis DSM 12940  Archaea  normal  0.782605  n/a   
 
 
-
 
NC_011831  Cagg_2476  nickel-dependent hydrogenase large subunit  41.33 
 
 
473 aa  360  4e-98  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.795621  normal  0.410999 
 
 
-
 
NC_011729  PCC7424_4160  nickel-dependent hydrogenase large subunit  42.83 
 
 
474 aa  359  5e-98  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007614  Nmul_A1673  nickel-dependent hydrogenase, large subunit  40.96 
 
 
493 aa  359  5e-98  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.521628  n/a   
 
 
-
 
NC_002977  MCA0114  NAD-reducing hydrogenase, beta subunit  40.04 
 
 
494 aa  359  7e-98  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0982  nickel-dependent hydrogenase, large subunit  42.23 
 
 
487 aa  358  9.999999999999999e-98  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_1007  nickel-dependent hydrogenase, large subunit  41.91 
 
 
455 aa  357  1.9999999999999998e-97  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4043  nickel-dependent hydrogenase large subunit  40.93 
 
 
473 aa  353  2.9999999999999997e-96  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.0198059 
 
 
-
 
NC_008554  Sfum_2221  nickel-dependent hydrogenase, large subunit  40.94 
 
 
482 aa  352  7e-96  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.794889  normal  0.78316 
 
 
-
 
NC_011726  PCC8801_0095  nickel-dependent hydrogenase large subunit  41.43 
 
 
474 aa  351  2e-95  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013385  Adeg_2013  nickel-dependent hydrogenase large subunit  39.32 
 
 
487 aa  351  2e-95  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_0092  nickel-dependent hydrogenase large subunit  41.43 
 
 
474 aa  350  3e-95  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.643449 
 
 
-
 
NC_007908  Rfer_3855  nickel-dependent hydrogenase, large subunit  39.56 
 
 
507 aa  349  6e-95  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2748  nickel-dependent hydrogenase large subunit  41.1 
 
 
488 aa  346  5e-94  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_007953  Bxe_C0531  putative nickel-dependent hydrogenase, large subunit  38.68 
 
 
504 aa  344  2e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3537  nickel-dependent hydrogenase, large subunit  38.62 
 
 
469 aa  343  4e-93  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_1215  nickel-dependent hydrogenase, large subunit  37.47 
 
 
499 aa  343  4e-93  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0417903 
 
 
-
 
NC_007413  Ava_4661  nickel-dependent hydrogenase, large subunit  41.27 
 
 
487 aa  343  5e-93  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_2555  NAD-reducing hydrogenase HoxS beta subunit  40.49 
 
 
476 aa  339  5e-92  Synechococcus elongatus PCC 7942  Bacteria  normal  0.148056  normal 
 
 
-
 
NC_010814  Glov_2791  nickel-dependent hydrogenase large subunit  40.48 
 
 
482 aa  338  1.9999999999999998e-91  Geobacter lovleyi SZ  Bacteria  normal  0.119602  n/a   
 
 
-
 
NC_008554  Sfum_3954  nickel-dependent hydrogenase, large subunit  40.94 
 
 
449 aa  336  3.9999999999999995e-91  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.644029 
 
 
-
 
NC_009523  RoseRS_3539  nickel-dependent hydrogenase, large subunit  40.93 
 
 
474 aa  334  2e-90  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1791  hydrogen dehydrogenase  40.71 
 
 
449 aa  332  9e-90  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_1368  nickel-dependent hydrogenase large subunit  40.53 
 
 
475 aa  331  2e-89  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1525  nickel-dependent hydrogenase, large subunit  40.47 
 
 
488 aa  328  2.0000000000000001e-88  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00000894187  hitchhiker  0.00486844 
 
 
-
 
NC_008726  Mvan_4113  nickel-dependent hydrogenase, large subunit  39.44 
 
 
489 aa  327  2.0000000000000001e-88  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.0509028  normal  0.183384 
 
 
-
 
NC_010571  Oter_3680  nickel-dependent hydrogenase large subunit  37.5 
 
 
509 aa  325  9e-88  Opitutus terrae PB90-1  Bacteria  normal  0.0782936  normal  0.503756 
 
 
-
 
NC_008554  Sfum_2716  nickel-dependent hydrogenase, large subunit  39.96 
 
 
479 aa  323  3e-87  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.892044  normal 
 
 
-
 
NC_002939  GSU2718  NAD-reducing hydrogenase, beta subunit  38.11 
 
 
478 aa  317  3e-85  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1113  nickel-dependent hydrogenase, large subunit  38.44 
 
 
476 aa  313  5.999999999999999e-84  Geobacter metallireducens GS-15  Bacteria  normal  0.301961  normal 
 
 
-
 
NC_011891  A2cp1_4314  nickel-dependent hydrogenase large subunit  36.27 
 
 
494 aa  307  2.0000000000000002e-82  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4292  nickel-dependent hydrogenase large subunit  35.84 
 
 
494 aa  304  2.0000000000000002e-81  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3884  nickel-dependent hydrogenase large subunit  37.39 
 
 
473 aa  299  8e-80  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3972  nickel-dependent hydrogenase large subunit  37.39 
 
 
473 aa  298  1e-79  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00000529156 
 
 
-
 
NC_007760  Adeh_4162  nickel-dependent hydrogenase, large subunit  36.27 
 
 
494 aa  297  2e-79  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0906302  n/a   
 
 
-
 
NC_007517  Gmet_3320  nickel-dependent hydrogenase, large subunit  37.03 
 
 
473 aa  292  8e-78  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2419  nickel-dependent hydrogenase, large subunit  38.24 
 
 
473 aa  287  2.9999999999999996e-76  Geobacter sulfurreducens PCA  Bacteria  normal  0.954862  n/a   
 
 
-
 
NC_010814  Glov_1553  nickel-dependent hydrogenase large subunit  35.74 
 
 
479 aa  286  5.999999999999999e-76  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_4306  nickel-dependent hydrogenase large subunit  35.7 
 
 
498 aa  280  3e-74  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.891144  normal  0.552071 
 
 
-
 
NC_013158  Huta_2605  nickel-dependent hydrogenase large subunit  30.91 
 
 
439 aa  197  3e-49  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0537031  n/a   
 
 
-
 
NC_008639  Cpha266_2169  nickel-dependent hydrogenase, large subunit  29.74 
 
 
424 aa  180  4.999999999999999e-44  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0245  hydrogenase/sulfur reductase, alpha subunit  29.11 
 
 
426 aa  179  1e-43  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.392685  n/a   
 
 
-
 
NC_010803  Clim_2097  nickel-dependent hydrogenase large subunit  30.02 
 
 
424 aa  176  6e-43  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_0080  nickel-dependent hydrogenase large subunit  30.15 
 
 
421 aa  176  9e-43  Aciduliprofundum boonei T469  Archaea  normal  0.303597  n/a   
 
 
-
 
NC_011884  Cyan7425_2660  Coenzyme F420 hydrogenase  29.01 
 
 
433 aa  173  5e-42  Cyanothece sp. PCC 7425  Bacteria  normal  0.041142  normal 
 
 
-
 
NC_013204  Elen_1256  nickel-dependent hydrogenase large subunit  28.73 
 
 
430 aa  171  3e-41  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_4496  nickel-dependent hydrogenase, large subunit  29.37 
 
 
430 aa  168  2e-40  Frankia sp. CcI3  Bacteria  normal  0.401222  normal 
 
 
-
 
NC_011060  Ppha_2499  nickel-dependent hydrogenase large subunit  28.38 
 
 
424 aa  168  2e-40  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_1929  nickel-dependent hydrogenase large subunit  29.65 
 
 
425 aa  166  8e-40  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_04400  Soluble nickel-dependent hydrogenase, large subunit, HoxH  29.82 
 
 
419 aa  163  6e-39  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2132  nickel-dependent hydrogenase large subunit  28.91 
 
 
425 aa  162  9e-39  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0448433  normal  0.0283043 
 
 
-
 
NC_008942  Mlab_0015  coenzyme F420-reducing hydrogenase, alpha subunit  29 
 
 
455 aa  161  3e-38  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_009634  Mevan_0073  nickel-dependent hydrogenase large subunit  30.52 
 
 
410 aa  155  1e-36  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_011206  Lferr_1055  nickel-dependent hydrogenase large subunit  29.01 
 
 
432 aa  154  2e-36  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.620596 
 
 
-
 
NC_011761  AFE_0937  [NiFe] hydrogenase, alpha subunit, putative  29.18 
 
 
422 aa  154  5e-36  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.952693  n/a   
 
 
-
 
NC_009051  Memar_2174  nickel-dependent hydrogenase, large subunit  27.65 
 
 
455 aa  154  5e-36  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_010581  Bind_0507  nickel-dependent hydrogenase large subunit  28.92 
 
 
429 aa  153  5e-36  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_0884  nickel-dependent hydrogenase, large subunit  25.53 
 
 
432 aa  152  1e-35  Magnetococcus sp. MC-1  Bacteria  normal  0.912975  normal  0.251676 
 
 
-
 
NC_009135  MmarC5_0649  coenzyme F420-reducing hydrogenase, alpha subunit  30.52 
 
 
410 aa  151  2e-35  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_008578  Acel_1019  nickel-dependent hydrogenase, large subunit  29.45 
 
 
431 aa  151  2e-35  Acidothermus cellulolyticus 11B  Bacteria  normal  hitchhiker  0.00653003 
 
 
-
 
NC_006369  lpl2387  hypothetical protein  28.92 
 
 
430 aa  150  5e-35  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1138  nickel-dependent hydrogenase large subunit  27.94 
 
 
431 aa  149  1.0000000000000001e-34  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2287  coenzyme F420 hydrogenase, subunit alpha  27.33 
 
 
456 aa  149  1.0000000000000001e-34  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.304616 
 
 
-
 
NC_007796  Mhun_2332  nickel-dependent hydrogenase, large subunit  26.42 
 
 
469 aa  149  1.0000000000000001e-34  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008781  Pnap_1954  nickel-dependent hydrogenase, large subunit  26.21 
 
 
485 aa  147  3e-34  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.935689  normal 
 
 
-
 
NC_013501  Rmar_2590  nickel-dependent hydrogenase large subunit  28.32 
 
 
433 aa  147  5e-34  Rhodothermus marinus DSM 4252  Bacteria  normal  0.282401  n/a   
 
 
-
 
NC_007355  Mbar_A0452  coenzyme F420-reducing hydrogenase, alpha subunit  25.42 
 
 
456 aa  146  7.0000000000000006e-34  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_008146  Mmcs_3416  nickel-dependent hydrogenase, large subunit  26.9 
 
 
430 aa  146  7.0000000000000006e-34  Mycobacterium sp. MCS  Bacteria  normal  0.291194  n/a   
 
 
-
 
NC_008705  Mkms_3479  nickel-dependent hydrogenase, large subunit  26.9 
 
 
430 aa  146  7.0000000000000006e-34  Mycobacterium sp. KMS  Bacteria  normal  0.441341  normal  0.0523033 
 
 
-
 
NC_009483  Gura_1122  nickel-dependent hydrogenase, large subunit  27.33 
 
 
425 aa  146  7.0000000000000006e-34  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3427  nickel-dependent hydrogenase, large subunit  26.9 
 
 
430 aa  146  8.000000000000001e-34  Mycobacterium sp. JLS  Bacteria  normal  normal  0.260108 
 
 
-
 
NC_013173  Dbac_1969  nickel-dependent hydrogenase large subunit  29.13 
 
 
514 aa  146  1e-33  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.668451  n/a   
 
 
-
 
NC_014165  Tbis_1858  nickel-dependent hydrogenase large subunit  27.68 
 
 
428 aa  145  2e-33  Thermobispora bispora DSM 43833  Bacteria  normal  0.940457  normal 
 
 
-
 
NC_006368  lpp2532  hypothetical protein  28.32 
 
 
430 aa  144  3e-33  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_4826  nickel-dependent hydrogenase large subunit  27.56 
 
 
428 aa  144  3e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.106762  normal 
 
 
-
 
NC_007404  Tbd_1263  hypothetical protein  27.29 
 
 
433 aa  141  3e-32  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.321319  normal 
 
 
-
 
NC_008751  Dvul_1248  nickel-dependent hydrogenase, large subunit  28.74 
 
 
488 aa  139  2e-31  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.210122 
 
 
-
 
NC_009635  Maeo_1045  nickel-dependent hydrogenase large subunit  28.41 
 
 
385 aa  137  6.0000000000000005e-31  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0692  nickel-dependent hydrogenase large subunit  27.54 
 
 
390 aa  137  6.0000000000000005e-31  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_011769  DvMF_0273  nickel-dependent hydrogenase large subunit  27.99 
 
 
488 aa  136  7.000000000000001e-31  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.328721 
 
 
-
 
NC_013385  Adeg_1231  nickel-dependent hydrogenase large subunit  29.04 
 
 
458 aa  135  9.999999999999999e-31  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2135  periplasmic (NiFeSe) hydrogenase, large subunit, selenocysteine-containing  28.66 
 
 
488 aa  135  1.9999999999999998e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_0084  coenzyme F420 hydrogenase, subunit alpha  26.3 
 
 
455 aa  135  1.9999999999999998e-30  Methanosphaerula palustris E1-9c  Archaea  decreased coverage  0.0042117  normal  0.0638209 
 
 
-
 
NC_013552  DhcVS_120  Ni/Fe hydrogenase, large subunit  26.93 
 
 
526 aa  134  3.9999999999999996e-30  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
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