15 homologs were found in PanDaTox collection
for query gene MmarC5_0078 on replicon NC_009135
Organism: Methanococcus maripaludis C5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009135  MmarC5_0078  XRE family transcriptional regulator  100 
 
 
170 aa  333  7e-91  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0743  hypothetical protein  97.65 
 
 
170 aa  329  1e-89  Methanococcus maripaludis C7  Archaea  normal  normal  0.81664 
 
 
-
 
NC_009975  MmarC6_1175  hypothetical protein  97.65 
 
 
170 aa  306  1e-82  Methanococcus maripaludis C6  Archaea  normal  0.101652  n/a   
 
 
-
 
NC_009634  Mevan_0808  hypothetical protein  86.47 
 
 
170 aa  298  2e-80  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_1289  hypothetical protein  70 
 
 
170 aa  244  4e-64  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_008553  Mthe_1633  XRE family transcriptional regulator  41.77 
 
 
172 aa  124  5e-28  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007796  Mhun_0501  XRE family transcriptional regulator  41.88 
 
 
162 aa  124  6e-28  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.507736 
 
 
-
 
NC_007955  Mbur_2130  XRE family transcriptional regulator  44.1 
 
 
167 aa  124  9e-28  Methanococcoides burtonii DSM 6242  Archaea  normal  0.120661  n/a   
 
 
-
 
NC_009051  Memar_0106  helix-turn-helix domain-containing protein  34.62 
 
 
161 aa  111  5e-24  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009712  Mboo_2112  helix-turn-helix domain-containing protein  37.18 
 
 
162 aa  110  9e-24  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A1033  XRE family transcriptional regulator  40.41 
 
 
173 aa  109  2e-23  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_1154  transcriptional regulator, XRE family  35.9 
 
 
162 aa  108  5e-23  Methanosphaerula palustris E1-9c  Archaea  normal  0.501074  normal 
 
 
-
 
NC_009712  Mboo_0738  helix-turn-helix domain-containing protein  41.38 
 
 
177 aa  104  5e-22  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0931337  normal  0.163713 
 
 
-
 
NC_011832  Mpal_2739  transcriptional regulator, XRE family  36.54 
 
 
162 aa  102  3e-21  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.760407 
 
 
-
 
NC_008942  Mlab_0071  XRE family transcriptional regulator  36.88 
 
 
161 aa  97.1  1e-19  Methanocorpusculum labreanum Z  Archaea  normal  hitchhiker  0.000421347 
 
 
-
 
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