14 homologs were found in PanDaTox collection
for query gene MmarC5_0020 on replicon NC_009135
Organism: Methanococcus maripaludis C5



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009135  MmarC5_0020  methyl-coenzyme M reductase, protein D  100 
 
 
159 aa  325  1e-88  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0803  methyl-coenzyme M reductase, protein D  98.11 
 
 
159 aa  321  3e-87  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009975  MmarC6_1114  methyl-coenzyme M reductase operon protein D  94.97 
 
 
159 aa  294  4e-79  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_0869  methyl-coenzyme M reductase, protein D  86.71 
 
 
160 aa  286  7e-77  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_1265  methyl-coenzyme M reductase, protein D  62.26 
 
 
163 aa  227  5e-59  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_008553  Mthe_0571  methyl-coenzyme M reductase, protein D  36.71 
 
 
170 aa  125  2e-28  Methanosaeta thermophila PT  Archaea  hitchhiker  0.00456714  n/a   
 
 
-
 
NC_007355  Mbar_A0896  methyl coenzyme M reductase, subunit C  37.97 
 
 
171 aa  115  3e-25  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_009051  Memar_0376  methyl-coenzyme M reductase, protein D  39.44 
 
 
159 aa  114  5e-25  Methanoculleus marisnigri JR1  Archaea  normal  0.259106  n/a   
 
 
-
 
NC_007796  Mhun_2145  methyl-coenzyme M reductase, protein D  39.86 
 
 
156 aa  104  5e-22  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.266766 
 
 
-
 
NC_007955  Mbur_2420  methyl-coenzyme M reductase, protein D  33.33 
 
 
162 aa  102  2e-21  Methanococcoides burtonii DSM 6242  Archaea  normal  0.984807  n/a   
 
 
-
 
NC_008942  Mlab_1564  hypothetical protein  38.89 
 
 
157 aa  101  4e-21  Methanocorpusculum labreanum Z  Archaea  normal  0.63457  hitchhiker  0.00032347 
 
 
-
 
NC_009051  Memar_0616  methyl-coenzyme M reductase, protein D  36.55 
 
 
158 aa  100  7e-21  Methanoculleus marisnigri JR1  Archaea  decreased coverage  6.56018e-07  n/a   
 
 
-
 
NC_011832  Mpal_2306  methyl-coenzyme M reductase operon protein D  32.87 
 
 
155 aa  94.7  4e-19  Methanosphaerula palustris E1-9c  Archaea  normal  0.453423  normal 
 
 
-
 
NC_009712  Mboo_0585  methyl-coenzyme M reductase, protein D  33.57 
 
 
156 aa  92.4  2e-18  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.0183887  normal  0.099975 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>