46 homologs were found in PanDaTox collection
for query gene Mmar10_0162 on replicon NC_008347
Organism: Maricaulis maris MCS10



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008347  Mmar10_0162  restriction modification system DNA specificity subunit  100 
 
 		 383 aa  774    Maricaulis maris MCS10  Bacteria  normal  1  normal  0.323401 
 
 
-
 
NC_008639  Cpha266_1131  restriction modification system DNA specificity subunit  28.86 
 
 		 413 aa  157  2e-37  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_008530  LGAS_0901  restriction endonuclease S subunit  36.54 
 
 		 363 aa  155  1e-36  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.000000124976  hitchhiker  0.000000573897 
 
 
-
 
NC_011138  MADE_03610  type I site-specific deoxyribonuclease  44.67 
 
 		 360 aa  128  2.0000000000000002e-28  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008312  Tery_2421  restriction modification system DNA specificity subunit  29.52 
 
 		 402 aa  103  4e-21  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.318068 
 
 
-
 
NC_008577  Shewana3_2028  restriction modification system DNA specificity subunit  25.93 
 
 		 391 aa  97.4  4e-19  Shewanella sp. ANA-3  Bacteria  normal  1  hitchhiker  0.000400239 
 
 
-
 
NC_010513  Xfasm12_0262  type I restriction-modification system specificity determinant  47.62 
 
 		 360 aa  97.1  5e-19  Xylella fastidiosa M12  Bacteria  normal  0.874092  n/a   
 
 
-
 
NC_009943  Dole_2726  restriction modification system DNA specificity subunit  25.98 
 
 		 500 aa  92.8  8e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_3180  restriction modification system DNA specificity domain protein  31.37 
 
 		 390 aa  85.5  0.000000000000001  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_1037  restriction modification system DNA specificity domain  27.38 
 
 		 364 aa  85.9  0.000000000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0890662  normal  1 
 
 
-
 
NC_009654  Mmwyl1_3199  restriction modification system DNA specificity subunit  41.67 
 
 		 400 aa  85.9  0.000000000000001  Marinomonas sp. MWYL1  Bacteria  normal  0.365834  normal  1 
 
 
-
 
NC_009483  Gura_2097  restriction modification system DNA specificity subunit  29.86 
 
 		 393 aa  84.3  0.000000000000003  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C4714  restriction modification system DNA specificity domain  28.52 
 
 		 380 aa  83.6  0.000000000000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.232226  normal  1 
 
 
-
 
NC_013161  Cyan8802_0727  restriction modification system DNA specificity domain protein  31.3 
 
 		 400 aa  83.2  0.000000000000008  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.0968972 
 
 
-
 
NC_011004  Rpal_1502  restriction modification system DNA specificity domain  26.2 
 
 		 393 aa  81.6  0.00000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010658  SbBS512_E4810  putative type I restriction-modification system specificity subunit  24.55 
 
 		 360 aa  80.1  0.00000000000006  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_1060  restriction modification system DNA specificity subunit  27.62 
 
 		 397 aa  75.9  0.000000000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.588803  n/a   
 
 
-
 
NC_010718  Nther_0796  restriction modification system DNA specificity domain  36.03 
 
 		 441 aa  70.5  0.00000000005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  hitchhiker  0.00343889 
 
 
-
 
NC_010571  Oter_3010  restriction endonuclease S subunits-like protein  29.06 
 
 		 388 aa  68.9  0.0000000001  Opitutus terrae PB90-1  Bacteria  normal  0.116402  normal  0.20864 
 
 
-
 
NC_009051  Memar_1093  restriction modification system DNA specificity subunit  28.67 
 
 		 394 aa  67  0.0000000005  Methanoculleus marisnigri JR1  Archaea  normal  0.614941  n/a   
 
 
-
 
NC_008530  LGAS_0899  restriction endonuclease S subunit  24.39 
 
 		 396 aa  64.7  0.000000002  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.0000000681459  hitchhiker  0.00000169581 
 
 
-
 
NC_009439  Pmen_0564  restriction modification system DNA specificity subunit  28.42 
 
 		 415 aa  63.2  0.000000008  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00017151  decreased coverage  6.20122e-17 
 
 
-
 
NC_011060  Ppha_1452  restriction modification system DNA specificity domain  22.74 
 
 		 392 aa  61.6  0.00000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.0462219  n/a   
 
 
-
 
NC_012917  PC1_2875  restriction modification system DNA specificity domain protein  24.15 
 
 		 390 aa  61.2  0.00000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_4240  Restriction endonuclease S subunits-like protein  25.37 
 
 		 436 aa  60.8  0.00000004  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_008346  Swol_0515  type I restriction-modification system (specificity subunit)  25.2 
 
 		 263 aa  60.5  0.00000005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_008043  TM1040_3540  restriction modification system DNA specificity subunit  26.43 
 
 		 387 aa  60.1  0.00000007  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009513  Lreu_1433  restriction modification system DNA specificity subunit  23.51 
 
 		 372 aa  59.7  0.00000009  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_013203  Apar_0198  restriction modification system DNA specificity domain protein  24.23 
 
 		 386 aa  58.9  0.0000001  Atopobium parvulum DSM 20469  Bacteria  normal  0.719886  decreased coverage  0.000218103 
 
 
-
 
NC_007514  Cag_1526  restriction endonuclease S subunits-like  23.72 
 
 		 386 aa  57.4  0.0000004  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_009135  MmarC5_1170  restriction modification system DNA specificity subunit  23.69 
 
 		 402 aa  55.8  0.000001  Methanococcus maripaludis C5  Archaea  normal  0.249165  n/a   
 
 
-
 
NC_008346  Swol_2257  restriction endonuclease S subunits-like protein  23.53 
 
 		 413 aa  56.2  0.000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_1027  restriction modification system DNA specificity subunit  32.17 
 
 		 420 aa  52.4  0.00001  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_2960  restriction modification system DNA specificity subunit  29.76 
 
 		 587 aa  51.2  0.00003  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_02063  type I restriction-modification system, S subunit  30.43 
 
 		 501 aa  51.2  0.00003  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009513  Lreu_1435  restriction modification system DNA specificity subunit  23.72 
 
 		 340 aa  48.9  0.0001  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1536  restriction modification system DNA specificity domain  24.85 
 
 		 364 aa  48.1  0.0002  Anaeromyxobacter sp. K  Bacteria  normal  0.856573  n/a   
 
 
-
 
NC_011663  Sbal223_4189  restriction modification system DNA specificity domain protein  21.65 
 
 		 401 aa  48.9  0.0002  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_0030  restriction modification system DNA specificity subunit  23.14 
 
 		 435 aa  47.4  0.0004  Marinobacter aquaeolei VT8  Bacteria  normal  0.534213  n/a   
 
 
-
 
NC_010831  Cphamn1_0750  putative type I restriction-modification system  22.71 
 
 		 436 aa  46.2  0.0009  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.769779  normal  0.272821 
 
 
-
 
NC_009338  Mflv_0804  restriction modification system DNA specificity subunit  35.48 
 
 		 368 aa  45.4  0.002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.526121  normal  0.427419 
 
 
-
 
NC_007947  Mfla_1216  restriction modification system DNA specificity subunit  26.13 
 
 		 427 aa  44.7  0.002  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013161  Cyan8802_2277  restriction modification system DNA specificity domain protein  31.88 
 
 		 433 aa  44.7  0.003  Cyanothece sp. PCC 8802  Bacteria  normal  0.200455  hitchhiker  0.00000677276 
 
 
-
 
NC_010505  Mrad2831_4593  glycosyl transferase family protein  31.67 
 
 		 344 aa  43.9  0.004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.734638  normal  1 
 
 
-
 
NC_008699  Noca_1106  restriction modification system DNA specificity subunit  37.25 
 
 		 161 aa  43.5  0.006  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_1260  restriction modification system DNA specificity subunit  22.97 
 
 		 385 aa  43.1  0.008  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>