20 homologs were found in PanDaTox collection
for query gene Mlg_0055 on replicon NC_008340
Organism: Alkalilimnicola ehrlichii MLHE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008340  Mlg_0055  hypothetical protein  100 
 
 
215 aa  416  1e-115  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_0324  hypothetical protein  37.86 
 
 
228 aa  115  4e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0397  hypothetical protein  37.86 
 
 
228 aa  115  4e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3722  hypothetical protein  39.35 
 
 
211 aa  110  2e-23  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1101  type VI secretion-associated protein, family  31.58 
 
 
240 aa  107  1e-22  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A1220  type VI secretion-associated protein  31.1 
 
 
245 aa  106  3e-22  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.225071 
 
 
-
 
NC_009654  Mmwyl1_1207  hypothetical protein  29.77 
 
 
208 aa  99.8  3e-20  Marinomonas sp. MWYL1  Bacteria  normal  0.131804  normal 
 
 
-
 
NC_011353  ECH74115_0236  type VI secretion-associated protein, VC_A0118 family  34.08 
 
 
247 aa  98.6  6e-20  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A0228  type VI secretion-associated protein  34.08 
 
 
247 aa  98.2  7e-20  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0230  type VI secretion-associated protein  34.08 
 
 
247 aa  98.2  7e-20  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2518  hypothetical protein  31.94 
 
 
213 aa  94.7  1e-18  Shewanella woodyi ATCC 51908  Bacteria  normal  0.356894  normal 
 
 
-
 
NC_002947  PP_4073  hypothetical protein  33.51 
 
 
210 aa  87  2e-16  Pseudomonas putida KT2440  Bacteria  decreased coverage  2.42305e-05  unclonable  7.67708e-07 
 
 
-
 
NC_009456  VC0395_0019  hypothetical protein  34.62 
 
 
227 aa  78.6  7e-14  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2128  hypothetical protein  29.44 
 
 
216 aa  73.9  1e-12  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2625  hypothetical protein  30.46 
 
 
231 aa  73.9  2e-12  Pseudomonas putida KT2440  Bacteria  normal  0.0930026  normal 
 
 
-
 
NC_010322  PputGB1_3223  hypothetical protein  29.21 
 
 
245 aa  70.5  2e-11  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2796  type VI secretion-associated protein, VC_A0118 family  31.65 
 
 
187 aa  65.5  6e-10  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3244  type VI secretion-associated protein, VC_A0118 family  33.14 
 
 
186 aa  62.8  4e-09  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1081  type VI secretion-associated protein, VC_A0118 family  33.91 
 
 
186 aa  58.5  8e-08  Pectobacterium wasabiae WPP163  Bacteria  normal  0.212059  n/a   
 
 
-
 
NC_011988  Avi_6163  hypothetical protein  23.28 
 
 
205 aa  43.5  0.002  Agrobacterium vitis S4  Bacteria  normal  0.689253  n/a   
 
 
-
 
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