10 homologs were found in PanDaTox collection
for query gene Mext_2300 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_2300  O-antigen polymerase  100 
 
 
428 aa  792    Methylobacterium extorquens PA1  Bacteria  decreased coverage  0.00840255  hitchhiker  0.00785546 
 
 
-
 
NC_011757  Mchl_2575  O-antigen polymerase  96.03 
 
 
428 aa  594  1e-168  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.213625 
 
 
-
 
NC_010725  Mpop_2256  O-antigen polymerase  87.81 
 
 
409 aa  521  1e-146  Methylobacterium populi BJ001  Bacteria  normal  0.04422  normal  0.235233 
 
 
-
 
NC_010505  Mrad2831_2697  O-antigen polymerase  59.8 
 
 
406 aa  298  9e-80  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0361626 
 
 
-
 
NC_011894  Mnod_4667  O-antigen polymerase  53.28 
 
 
430 aa  267  2e-70  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4779  O-antigen polymerase  52.78 
 
 
410 aa  232  1e-59  Methylobacterium sp. 4-46  Bacteria  normal  0.24915  normal  0.386809 
 
 
-
 
NC_011666  Msil_1027  hypothetical protein  32.79 
 
 
422 aa  52  0.00002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0439573 
 
 
-
 
NC_010581  Bind_0585  hypothetical protein  29.64 
 
 
458 aa  48.1  0.0003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.789772  normal  0.681731 
 
 
-
 
NC_008347  Mmar10_2392  O-antigen polymerase  25.49 
 
 
412 aa  45.8  0.002  Maricaulis maris MCS10  Bacteria  normal  0.575587  normal  0.815053 
 
 
-
 
NC_007963  Csal_1694  O-antigen polymerase  25.1 
 
 
446 aa  43.5  0.007  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.000414796  n/a   
 
 
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