22 homologs were found in PanDaTox collection
for query gene Mext_0906 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_0906  hypothetical protein  100 
 
 
146 aa  288  2e-77  Methylobacterium extorquens PA1  Bacteria  decreased coverage  0.00446262  normal 
 
 
-
 
NC_011757  Mchl_0867  hypothetical protein  99.32 
 
 
146 aa  285  1e-76  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.326244  normal  0.33158 
 
 
-
 
NC_010725  Mpop_0835  hypothetical protein  84.25 
 
 
146 aa  228  1e-59  Methylobacterium populi BJ001  Bacteria  normal  0.165946  normal 
 
 
-
 
NC_011894  Mnod_4719  hypothetical protein  55.04 
 
 
138 aa  119  1e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.142673  n/a   
 
 
-
 
NC_010511  M446_4205  hypothetical protein  51.94 
 
 
138 aa  102  1e-21  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.422372 
 
 
-
 
NC_010505  Mrad2831_3545  hypothetical protein  55.68 
 
 
125 aa  97.8  4e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6281  hypothetical protein  55.43 
 
 
127 aa  88.2  3e-17  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5264  hypothetical protein  54.32 
 
 
149 aa  85.9  2e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.160969  n/a   
 
 
-
 
NC_010510  Mrad2831_6213  hypothetical protein  49.5 
 
 
210 aa  82.4  2e-15  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.357243 
 
 
-
 
NC_010172  Mext_1112  hypothetical protein  49.41 
 
 
194 aa  82  2e-15  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1361  hypothetical protein  43.24 
 
 
139 aa  81.6  3e-15  Methylobacterium sp. 4-46  Bacteria  normal  0.185984  normal  0.0295853 
 
 
-
 
NC_010511  M446_3303  hypothetical protein  54.65 
 
 
159 aa  80.9  6e-15  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.103466 
 
 
-
 
NC_010505  Mrad2831_1068  hypothetical protein  49.41 
 
 
157 aa  79.7  1e-14  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1255  hypothetical protein  47.06 
 
 
187 aa  78.6  3e-14  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1574  hypothetical protein  53.16 
 
 
139 aa  77.8  4e-14  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.511697 
 
 
-
 
NC_010505  Mrad2831_5242  hypothetical protein  51.85 
 
 
128 aa  76.3  1e-13  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0925743  normal 
 
 
-
 
NC_011757  Mchl_1289  hypothetical protein  47.73 
 
 
143 aa  75.9  2e-13  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0047  hypothetical protein  47.73 
 
 
185 aa  75.9  2e-13  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3865  hypothetical protein  47.06 
 
 
141 aa  69.7  1e-11  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0308026 
 
 
-
 
NC_010172  Mext_3483  hypothetical protein  43.53 
 
 
140 aa  65.5  3e-10  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3791  hypothetical protein  43.53 
 
 
140 aa  64.3  6e-10  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.239654 
 
 
-
 
NC_013164  Apre_1750  hypothetical protein  40.82 
 
 
189 aa  40.8  0.007  Anaerococcus prevotii DSM 20548  Bacteria  hitchhiker  0.00302655  n/a   
 
 
-
 
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