7 homologs were found in PanDaTox collection
for query gene Mext_0088 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_0088  hypothetical protein  100 
 
 
192 aa  365  1e-100  Methylobacterium extorquens PA1  Bacteria  normal  0.485772  normal 
 
 
-
 
NC_011757  Mchl_0081  hypothetical protein  95.31 
 
 
191 aa  340  1e-92  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.75599  normal 
 
 
-
 
NC_010505  Mrad2831_4255  hypothetical protein  36.14 
 
 
198 aa  59.3  3e-08  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.443184  normal  0.383342 
 
 
-
 
NC_011894  Mnod_7606  hypothetical protein  37.95 
 
 
184 aa  55.8  4e-07  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.972357  n/a   
 
 
-
 
NC_011757  Mchl_4012  hypothetical protein  34.02 
 
 
175 aa  51.2  8e-06  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.211289  normal 
 
 
-
 
NC_010172  Mext_3719  hypothetical protein  33.51 
 
 
175 aa  49.7  3e-05  Methylobacterium extorquens PA1  Bacteria  normal  0.138112  normal  0.703258 
 
 
-
 
NC_011757  Mchl_4094  HMG-I and HMG-Y DNA-binding domain protein  30.73 
 
 
172 aa  48.5  5e-05  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.569692  normal 
 
 
-
 
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