More than 300 homologs were found in PanDaTox collection
for query gene Mext_0011 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A0708  phosphoribosylformylglycinamidine synthase II  66.39 
 
 
740 aa  969  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2586  phosphoribosylformylglycinamidine synthase II  71.23 
 
 
739 aa  1064  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.236603 
 
 
-
 
NC_009715  CCV52592_1835  phosphoribosylformylglycinamidine synthase II  48.22 
 
 
729 aa  642  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1752  phosphoribosylformylglycinamidine synthase II  72.8 
 
 
736 aa  1063  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_1636  phosphoribosylformylglycinamidine synthase II  72.38 
 
 
744 aa  1074  Nitrobacter hamburgensis X14  Bacteria  normal  0.206882  n/a   
 
 
-
 
NC_009675  Anae109_4362  phosphoribosylformylglycinamidine synthase II  56.39 
 
 
767 aa  796  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516732  normal  0.595476 
 
 
-
 
NC_008009  Acid345_4622  phosphoribosylformylglycinamidine synthase II  51.18 
 
 
768 aa  705  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.409731  normal  0.560245 
 
 
-
 
NC_008044  TM1040_1118  phosphoribosylformylglycinamidine synthase II  63.33 
 
 
721 aa  837  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_2197  phosphoribosylformylglycinamidine synthase II  62.4 
 
 
747 aa  920  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.541923 
 
 
-
 
NC_009674  Bcer98_0273  phosphoribosylformylglycinamidine synthase II  48.97 
 
 
739 aa  662  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_4090  phosphoribosylformylglycinamidine synthase II  70.36 
 
 
749 aa  1063  Xanthobacter autotrophicus Py2  Bacteria  normal  0.919609  normal 
 
 
-
 
NC_007802  Jann_2173  phosphoribosylformylglycinamidine synthase II  62.23 
 
 
719 aa  851  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_2048  phosphoribosylformylglycinamidine synthase II  51.98 
 
 
733 aa  687  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.156991 
 
 
-
 
NC_012039  Cla_0547  phosphoribosylformylglycinamidine synthase II  44.93 
 
 
725 aa  635  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_4214  phosphoribosylformylglycinamidine synthase II  56.59 
 
 
759 aa  780  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.317587  n/a   
 
 
-
 
NC_009952  Dshi_1713  phosphoribosylformylglycinamidine synthase II  63.45 
 
 
723 aa  889  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.0229678 
 
 
-
 
NC_007778  RPB_3713  phosphoribosylformylglycinamidine synthase II  72.66 
 
 
736 aa  1050  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.755949  normal 
 
 
-
 
NC_007794  Saro_2256  phosphoribosylformylglycinamidine synthase II  62.21 
 
 
719 aa  900  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.158542  n/a   
 
 
-
 
NC_011666  Msil_1184  phosphoribosylformylglycinamidine synthase II  72.89 
 
 
735 aa  1093  Methylocella silvestris BL2  Bacteria  n/a    normal  0.25177 
 
 
-
 
NC_012793  GWCH70_0259  phosphoribosylformylglycinamidine synthase II  49.86 
 
 
742 aa  704  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2144  phosphoribosylformylglycinamidine synthase II  67.12 
 
 
744 aa  963  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.470328  normal  0.180607 
 
 
-
 
NC_009667  Oant_2389  phosphoribosylformylglycinamidine synthase II  68.48 
 
 
740 aa  988  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0996  phosphoribosylformylglycinamidine synthase subunit II  50.21 
 
 
727 aa  644  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.262148  n/a   
 
 
-
 
NC_010338  Caul_3455  phosphoribosylformylglycinamidine synthase II  61.98 
 
 
737 aa  889  Caulobacter sp. K31  Bacteria  normal  0.821031  normal 
 
 
-
 
NC_009484  Acry_2665  phosphoribosylformylglycinamidine synthase II  62.07 
 
 
727 aa  877  Acidiphilium cryptum JF-5  Bacteria  normal  0.367188  n/a   
 
 
-
 
NC_013440  Hoch_3840  phosphoribosylformylglycinamidine synthase II  55.22 
 
 
761 aa  713  Haliangium ochraceum DSM 14365  Bacteria  normal  0.619159  normal  0.165254 
 
 
-
 
NC_009428  Rsph17025_0894  phosphoribosylformylglycinamidine synthase II  62.52 
 
 
719 aa  873  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.139167 
 
 
-
 
NC_009253  Dred_2366  phosphoribosylformylglycinamidine synthase II  53.36 
 
 
741 aa  716  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3971  phosphoribosylformylglycinamidine synthase II  62.76 
 
 
723 aa  864  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1135  phosphoribosylformylglycinamidine synthase II  50.95 
 
 
742 aa  707  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009049  Rsph17029_1596  phosphoribosylformylglycinamidine synthase II  64.49 
 
 
740 aa  879  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.122735 
 
 
-
 
NC_013205  Aaci_0397  phosphoribosylformylglycinamidine synthase II  52.18 
 
 
744 aa  681  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5401  phosphoribosylformylglycinamidine synthase II  73.05 
 
 
735 aa  1102  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0179  phosphoribosylformylglycinamidine synthase II  49.4 
 
 
758 aa  643  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1277  phosphoribosylformylglycinamidine synthase II  69.05 
 
 
744 aa  1003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1505  phosphoribosylformylglycinamidine synthase II  68.07 
 
 
743 aa  951  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.244217 
 
 
-
 
NC_013525  Tter_1015  phosphoribosylformylglycinamidine synthase II  48.08 
 
 
736 aa  637  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_1663  phosphoribosylformylglycinamidine synthase II  46.92 
 
 
750 aa  635  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_1450  phosphoribosylformylglycinamidine synthase II  51.06 
 
 
733 aa  710  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00244925  n/a   
 
 
-
 
NC_008347  Mmar10_1027  phosphoribosylformylglycinamidine synthase II  62.64 
 
 
741 aa  894  Maricaulis maris MCS10  Bacteria  normal  normal  0.352422 
 
 
-
 
NC_008527  LACR_1619  phosphoribosylformylglycinamidine synthase II  48.51 
 
 
739 aa  672  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3970  phosphoribosylformylglycinamidine synthase II  63.66 
 
 
724 aa  947  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.0786403 
 
 
-
 
NC_009505  BOV_0829  phosphoribosylformylglycinamidine synthase II  68.77 
 
 
740 aa  983  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008783  BARBAKC583_0863  phosphoribosylformylglycinamidine synthase II  64.58 
 
 
737 aa  975  Bartonella bacilliformis KC583  Bacteria  normal  0.472862  n/a   
 
 
-
 
NC_003909  BCE_0323  phosphoribosylformylglycinamidine synthase II  49.32 
 
 
739 aa  667  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1308  phosphoribosylformylglycinamidine synthase II  72.55 
 
 
737 aa  1054  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1127  phosphoribosylformylglycinamidine synthase II  88.66 
 
 
741 aa  1290  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0005  phosphoribosylformylglycinamidine synthase II  85.27 
 
 
737 aa  1283  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0508779 
 
 
-
 
NC_010581  Bind_3119  phosphoribosylformylglycinamidine synthase II  68.27 
 
 
736 aa  1014  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0010  phosphoribosylformylglycinamidine synthase II  96.63 
 
 
741 aa  1433  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0340  phosphoribosylformylglycinamidine synthase II  49.52 
 
 
739 aa  669  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0326  phosphoribosylformylglycinamidine synthase II  49.32 
 
 
739 aa  667  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK0269  phosphoribosylformylglycinamidine synthase II  49.04 
 
 
739 aa  665  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0266  phosphoribosylformylglycinamidine synthase II  49.18 
 
 
739 aa  663  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0281  phosphoribosylformylglycinamidine synthase II  49.32 
 
 
739 aa  667  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4980  phosphoribosylformylglycinamidine synthase II  49.66 
 
 
739 aa  670  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0012  phosphoribosylformylglycinamidine synthase II  99.6 
 
 
741 aa  1493  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.160482  normal 
 
 
-
 
NC_004310  BR0837  phosphoribosylformylglycinamidine synthase II  68.77 
 
 
740 aa  983  Brucella suis 1330  Bacteria  normal  0.41714  n/a   
 
 
-
 
NC_011145  AnaeK_4346  phosphoribosylformylglycinamidine synthase II  56.22 
 
 
759 aa  788  Anaeromyxobacter sp. K  Bacteria  normal  0.0491496  n/a   
 
 
-
 
NC_011004  Rpal_1786  phosphoribosylformylglycinamidine synthase II  72.23 
 
 
736 aa  1033  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_0185  phosphoribosylformylglycinamidine synthase II  61.07 
 
 
737 aa  862  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.774053  normal  0.310724 
 
 
-
 
NC_011989  Avi_1941  phosphoribosylformylglycinamidine synthase II  67.12 
 
 
745 aa  966  Agrobacterium vitis S4  Bacteria  normal  0.334918  n/a   
 
 
-
 
NC_011059  Paes_0996  phosphoribosylformylglycinamidine synthase II  47.4 
 
 
758 aa  635  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_1591  phosphoribosylformylglycinamidine synthase II  72.65 
 
 
736 aa  1068  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.304866 
 
 
-
 
NC_010320  Teth514_0521  phosphoribosylformylglycinamidine synthase II  49.86 
 
 
733 aa  693  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0275  phosphoribosylformylglycinamidine synthase II  49.04 
 
 
739 aa  664  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0294  phosphoribosylformylglycinamidine synthase II  49.32 
 
 
739 aa  667  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0547  phosphoribosylformylglycinamidine synthase II  52.07 
 
 
737 aa  715  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_0011  phosphoribosylformylglycinamidine synthase II  100 
 
 
741 aa  1498  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_22130  phosphoribosylformylglycinamidine synthase II  49.38 
 
 
733 aa  666  Halothermothrix orenii H 168  Bacteria  normal  0.759305  n/a   
 
 
-
 
NC_011891  A2cp1_4369  phosphoribosylformylglycinamidine synthase II  56.11 
 
 
759 aa  776  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2951  phosphoribosylformylglycinamidine synthase II  64.35 
 
 
746 aa  877  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0008  phosphoribosylformylglycinamidine synthase II  85.64 
 
 
737 aa  1291  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.70389  n/a   
 
 
-
 
NC_011369  Rleg2_1934  phosphoribosylformylglycinamidine synthase II  67.58 
 
 
743 aa  964  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0367  phosphoribosylformylglycinamidine synthase II  49.32 
 
 
739 aa  668  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0064  phosphoribosylformylglycinamidine synthase II  49.73 
 
 
746 aa  634  1e-180  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.250893  normal 
 
 
-
 
NC_011729  PCC7424_4321  phosphoribosylformylglycinamidine synthase II  46.84 
 
 
764 aa  633  1e-180  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008599  CFF8240_0556  phosphoribosylformylglycinamidine synthase II  46.2 
 
 
731 aa  632  1e-180  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.624203  n/a   
 
 
-
 
NC_008639  Cpha266_1265  phosphoribosylformylglycinamidine synthase II  48.97 
 
 
760 aa  633  1e-180  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.377491  n/a   
 
 
-
 
NC_009714  CHAB381_0667  phosphoribosylformylglycinamidine synthase II  46.79 
 
 
732 aa  629  1e-179  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.629797  n/a   
 
 
-
 
NC_007413  Ava_3636  phosphoribosylformylglycinamidine synthase II  48.51 
 
 
777 aa  625  1e-178  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.900704 
 
 
-
 
NC_009487  SaurJH9_1129  phosphoribosylformylglycinamidine synthase II  49.48 
 
 
729 aa  626  1e-178  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2298  phosphoribosylformylglycinamidine synthase II  50.49 
 
 
734 aa  627  1e-178  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.032092 
 
 
-
 
NC_009632  SaurJH1_1151  phosphoribosylformylglycinamidine synthase II  49.48 
 
 
729 aa  626  1e-178  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1273  phosphoribosylformylglycinamidine synthase II  47.56 
 
 
761 aa  625  1e-178  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.0637665 
 
 
-
 
NC_002976  SERP0654  phosphoribosylformylglycinamidine synthase II  48.89 
 
 
729 aa  623  1e-177  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1449  phosphoribosylformylglycinamidine synthase II  48.53 
 
 
730 aa  623  1e-177  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_1310  phosphoribosylformylglycinamidine synthase II  47.16 
 
 
760 aa  619  1e-176  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.831791  n/a   
 
 
-
 
NC_007512  Plut_1089  phosphoribosylformylglycinamidine synthase II  47.87 
 
 
761 aa  620  1e-176  Chlorobium luteolum DSM 273  Bacteria  normal  0.550447  normal  0.288584 
 
 
-
 
NC_003912  CJE1035  phosphoribosylformylglycinamidine synthase II  44.29 
 
 
728 aa  616  1e-175  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0291  phosphoribosylformylglycinamidine synthase II  46.67 
 
 
787 aa  618  1e-175  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010803  Clim_1205  phosphoribosylformylglycinamidine synthase II  47.54 
 
 
770 aa  615  1e-175  Chlorobium limicola DSM 245  Bacteria  normal  0.737255  n/a   
 
 
-
 
NC_007514  Cag_1019  phosphoribosylformylglycinamidine synthase II  45.66 
 
 
761 aa  616  1e-175  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.198854  n/a   
 
 
-
 
NC_009707  JJD26997_0826  phosphoribosylformylglycinamidine synthase II  44.64 
 
 
728 aa  617  1e-175  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3394  phosphoribosylformylglycinamidine synthase II  46.5 
 
 
802 aa  612  1e-174  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_3742  phosphoribosylformylglycinamidine synthase II  48.37 
 
 
767 aa  612  1e-174  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.182155 
 
 
-
 
NC_013510  Tcur_0312  phosphoribosylformylglycinamidine synthase II  46.11 
 
 
758 aa  613  1e-174  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0978  phosphoribosylformylglycinamidine synthase II  44.01 
 
 
728 aa  613  1e-174  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.74135  n/a   
 
 
-
 
NC_011726  PCC8801_3688  phosphoribosylformylglycinamidine synthase II  48.37 
 
 
767 aa  609  1e-173  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_0155  phosphoribosylformylglycinamidine synthase II  46.46 
 
 
769 aa  603  1e-171  Frankia sp. EAN1pec  Bacteria  normal  0.513467  normal  0.0402011 
 
 
-
 
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