More than 300 homologs were found in PanDaTox collection
for query gene Mesil_3226 on replicon NC_014213
Organism: Meiothermus silvanus DSM 9946



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014213  Mesil_3226  Transcriptional regulator  100 
 
 
410 aa  834    Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  100 
 
 
410 aa  834    Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  68.64 
 
 
407 aa  578  1e-164  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  41.94 
 
 
423 aa  326  4.0000000000000003e-88  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  29.37 
 
 
431 aa  175  1.9999999999999998e-42  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  30.54 
 
 
444 aa  169  8e-41  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_014212  Mesil_0955  extracellular solute-binding protein family 1  29.03 
 
 
437 aa  164  4.0000000000000004e-39  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.152307 
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  30.4 
 
 
436 aa  163  7e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  28.64 
 
 
431 aa  160  4e-38  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  26.83 
 
 
445 aa  159  1e-37  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  26 
 
 
414 aa  157  4e-37  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  26.62 
 
 
436 aa  155  1e-36  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  28.67 
 
 
410 aa  152  8.999999999999999e-36  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  28.28 
 
 
420 aa  150  5e-35  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  26.84 
 
 
410 aa  148  2.0000000000000003e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  28 
 
 
466 aa  147  4.0000000000000006e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  26.97 
 
 
410 aa  147  4.0000000000000006e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  30.13 
 
 
411 aa  147  4.0000000000000006e-34  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  26.43 
 
 
429 aa  146  8.000000000000001e-34  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  28.12 
 
 
415 aa  145  1e-33  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  26.49 
 
 
461 aa  144  2e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  24.01 
 
 
437 aa  141  1.9999999999999998e-32  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_010511  M446_6664  extracellular solute-binding protein  28.14 
 
 
452 aa  140  3.9999999999999997e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0689323 
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  27.11 
 
 
403 aa  140  3.9999999999999997e-32  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  24.82 
 
 
437 aa  139  7.999999999999999e-32  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_007777  Francci3_2834  extracellular solute-binding protein  29.18 
 
 
459 aa  139  1e-31  Frankia sp. CcI3  Bacteria  normal  0.873121  normal 
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  26.95 
 
 
432 aa  139  1e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  29.66 
 
 
441 aa  138  2e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  25 
 
 
458 aa  138  2e-31  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  26.29 
 
 
444 aa  137  3.0000000000000003e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_011894  Mnod_6751  extracellular solute-binding protein family 1  27.64 
 
 
441 aa  137  3.0000000000000003e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  25.17 
 
 
437 aa  137  3.0000000000000003e-31  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  27.04 
 
 
425 aa  136  9e-31  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.75 
 
 
458 aa  135  9.999999999999999e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.5 
 
 
458 aa  135  1.9999999999999998e-30  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.5 
 
 
458 aa  134  3.9999999999999996e-30  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.5 
 
 
458 aa  134  3.9999999999999996e-30  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  24.5 
 
 
458 aa  133  5e-30  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  24.5 
 
 
458 aa  133  5e-30  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  24.5 
 
 
458 aa  133  5e-30  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.5 
 
 
458 aa  133  5e-30  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  27.38 
 
 
410 aa  132  1.0000000000000001e-29  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0483  extracellular solute-binding protein  24.26 
 
 
458 aa  131  2.0000000000000002e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2611  extracellular solute-binding protein family 1  27.94 
 
 
453 aa  130  3e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.058641  normal 
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  27.23 
 
 
410 aa  130  6e-29  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  24.88 
 
 
439 aa  130  6e-29  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  27.42 
 
 
427 aa  127  4.0000000000000003e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_013526  Tter_2294  extracellular solute-binding protein family 1  25.39 
 
 
448 aa  126  7e-28  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2726  extracellular solute-binding protein  29.45 
 
 
437 aa  125  1e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.290956  n/a   
 
 
-
 
NC_010483  TRQ2_0970  extracellular solute-binding protein  26.73 
 
 
411 aa  125  1e-27  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.000309876  n/a   
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  26.9 
 
 
410 aa  125  2e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  25.89 
 
 
415 aa  125  2e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_009486  Tpet_0954  extracellular solute-binding protein  26.49 
 
 
411 aa  125  2e-27  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  26.95 
 
 
457 aa  124  4e-27  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  26.79 
 
 
422 aa  124  4e-27  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  26.79 
 
 
406 aa  123  5e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  26.82 
 
 
464 aa  123  6e-27  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_007413  Ava_3042  extracellular solute-binding protein  28.72 
 
 
406 aa  123  7e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0658677  normal 
 
 
-
 
NC_009667  Oant_2485  extracellular solute-binding protein  26.24 
 
 
415 aa  121  1.9999999999999998e-26  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00421769  n/a   
 
 
-
 
NC_014158  Tpau_3527  extracellular solute-binding protein family 1  26.86 
 
 
436 aa  121  1.9999999999999998e-26  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0125  glycerol-3-phosphate transporter periplasmic binding protein  24.19 
 
 
444 aa  121  3e-26  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  28.86 
 
 
426 aa  121  3e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0385  extracellular solute-binding protein family 1  28.65 
 
 
410 aa  119  7e-26  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0390662 
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  26.25 
 
 
411 aa  119  9.999999999999999e-26  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_013205  Aaci_2049  extracellular solute-binding protein family 1  27.68 
 
 
438 aa  119  9.999999999999999e-26  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.266449  n/a   
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  25.37 
 
 
411 aa  118  1.9999999999999998e-25  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4083  extracellular solute-binding protein family 1  27.53 
 
 
417 aa  117  3e-25  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_3697  glycerol-3-phosphate transporter periplasmic binding protein  26.2 
 
 
441 aa  117  3e-25  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  26.78 
 
 
366 aa  117  3e-25  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_009832  Spro_0234  glycerol-3-phosphate transporter periplasmic binding protein  25.17 
 
 
439 aa  117  3e-25  Serratia proteamaculans 568  Bacteria  normal  normal  0.500336 
 
 
-
 
NC_012912  Dd1591_4045  glycerol-3-phosphate transporter periplasmic binding protein  25.36 
 
 
439 aa  117  3e-25  Dickeya zeae Ech1591  Bacteria  normal  0.661181  n/a   
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  27.46 
 
 
420 aa  117  3e-25  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_006348  BMA2744  glycerol-3-phosphate transporter periplasmic binding protein  26.2 
 
 
441 aa  117  3.9999999999999997e-25  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3726  glycerol-3-phosphate transporter periplasmic binding protein  26.2 
 
 
441 aa  117  3.9999999999999997e-25  Burkholderia pseudomallei 1710b  Bacteria  normal  0.268589  n/a   
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  25 
 
 
424 aa  117  3.9999999999999997e-25  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3209  glycerol-3-phosphate transporter periplasmic binding protein  26.2 
 
 
441 aa  117  3.9999999999999997e-25  Burkholderia mallei SAVP1  Bacteria  normal  0.0248662  n/a   
 
 
-
 
NC_008836  BMA10229_A1760  glycerol-3-phosphate transporter periplasmic binding protein  26.2 
 
 
441 aa  117  3.9999999999999997e-25  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2794  glycerol-3-phosphate transporter periplasmic binding protein  26.2 
 
 
441 aa  117  3.9999999999999997e-25  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  26.39 
 
 
441 aa  117  3.9999999999999997e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
CP001509  ECD_03302  glycerol-3-phosphate transporter subunit  25.24 
 
 
438 aa  117  5e-25  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0262  extracellular solute-binding protein family 1  25.24 
 
 
438 aa  117  5e-25  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03255  hypothetical protein  25.24 
 
 
438 aa  117  5e-25  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0263  glycerol-3-phosphate transporter periplasmic binding protein  25.24 
 
 
438 aa  117  5e-25  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A3650  glycerol-3-phosphate transporter periplasmic binding protein  25.24 
 
 
438 aa  117  5e-25  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4767  glycerol-3-phosphate transporter periplasmic binding protein  25.24 
 
 
438 aa  117  5e-25  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.552805 
 
 
-
 
NC_012669  Bcav_3988  extracellular solute-binding protein family 1  24.87 
 
 
422 aa  117  5e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  25.71 
 
 
431 aa  116  6e-25  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_014212  Mesil_0475  extracellular solute-binding protein family 1  26.15 
 
 
397 aa  116  6.9999999999999995e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_0944  extracellular solute-binding protein family 1  25.87 
 
 
433 aa  115  8.999999999999998e-25  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.322748 
 
 
-
 
NC_013131  Caci_2108  extracellular solute-binding protein family 1  26.75 
 
 
430 aa  115  1.0000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.553068 
 
 
-
 
NC_012669  Bcav_1296  extracellular solute-binding protein family 1  26.46 
 
 
443 aa  115  1.0000000000000001e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_011366  Rleg2_5687  extracellular solute-binding protein family 1  25 
 
 
401 aa  115  1.0000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.627079  normal 
 
 
-
 
NC_013525  Tter_0427  extracellular solute-binding protein family 1  27.05 
 
 
497 aa  115  1.0000000000000001e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010658  SbBS512_E3870  glycerol-3-phosphate transporter periplasmic binding protein  25 
 
 
438 aa  115  1.0000000000000001e-24  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3306  extracellular solute-binding protein  24.24 
 
 
431 aa  115  1.0000000000000001e-24  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  27.85 
 
 
433 aa  115  1.0000000000000001e-24  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_013421  Pecwa_0117  glycerol-3-phosphate transporter periplasmic binding protein  24.08 
 
 
444 aa  115  1.0000000000000001e-24  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3931  glycerol-3-phosphate transporter periplasmic binding protein  25 
 
 
438 aa  115  1.0000000000000001e-24  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3861  glycerol-3-phosphate transporter periplasmic binding protein  24.94 
 
 
439 aa  115  2.0000000000000002e-24  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0648  extracellular solute-binding protein family 1  25.49 
 
 
447 aa  115  2.0000000000000002e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
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