60 homologs were found in PanDaTox collection
for query gene Mesil_0980 on replicon NC_014212
Organism: Meiothermus silvanus DSM 9946



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014212  Mesil_0980  transcriptional regulator, PaaX family  100 
 
 
259 aa  524  1e-148  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.148761 
 
 
-
 
NC_013946  Mrub_2629  PaaX family transcriptional regulator  72.2 
 
 
259 aa  383  1e-105  Meiothermus ruber DSM 1279  Bacteria  normal  0.495501  normal 
 
 
-
 
NC_013411  GYMC61_2859  transcriptional regulator, PaaX family  40.08 
 
 
285 aa  188  8e-47  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_2835  transcriptional regulator, PaaX family  34.82 
 
 
285 aa  156  3e-37  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_2009  transcriptional regulator, PaaX family  34.52 
 
 
281 aa  138  7e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.429433  normal 
 
 
-
 
NC_009654  Mmwyl1_3103  PaaX family transcriptional regulator  31.62 
 
 
307 aa  119  6e-26  Marinomonas sp. MWYL1  Bacteria  decreased coverage  0.000000661945  decreased coverage  0.0000397547 
 
 
-
 
NC_013235  Namu_0588  transcriptional regulator, PaaX family  34.05 
 
 
276 aa  118  9e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0787  transcriptional regulator, PaaX family  35.34 
 
 
268 aa  117  1.9999999999999998e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0708  PaaX family transcriptional regulator  35.36 
 
 
272 aa  115  6.9999999999999995e-25  Salinispora tropica CNB-440  Bacteria  normal  0.719013  normal  0.640912 
 
 
-
 
NC_009953  Sare_0655  PaaX family transcriptional regulator  34.98 
 
 
272 aa  115  1.0000000000000001e-24  Salinispora arenicola CNS-205  Bacteria  normal  0.0748596  hitchhiker  0.00291671 
 
 
-
 
NC_002947  PP_3286  PaaX family transcriptional regulator  31.32 
 
 
307 aa  111  1.0000000000000001e-23  Pseudomonas putida KT2440  Bacteria  normal  0.17765  normal 
 
 
-
 
NC_013739  Cwoe_2150  transcriptional regulator, PaaX family  35.53 
 
 
289 aa  110  2.0000000000000002e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.933136  normal  0.276366 
 
 
-
 
NC_009512  Pput_2473  PaaX family transcriptional regulator  31.32 
 
 
334 aa  110  2.0000000000000002e-23  Pseudomonas putida F1  Bacteria  normal  0.303711  normal 
 
 
-
 
NC_010322  PputGB1_2610  PaaX family transcriptional regulator  30.96 
 
 
334 aa  110  2.0000000000000002e-23  Pseudomonas putida GB-1  Bacteria  normal  0.218497  normal  0.0704814 
 
 
-
 
NC_013947  Snas_6455  transcriptional regulator, PaaX family  33.33 
 
 
260 aa  109  4.0000000000000004e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0703  transcriptional regulator, PaaX family  32.95 
 
 
259 aa  109  6e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1521  phenylacetic acid degradation operon negative regulatory protein PaaX  29.39 
 
 
312 aa  107  1e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2623  PaaX family transcriptional regulator  30.25 
 
 
334 aa  108  1e-22  Pseudomonas putida W619  Bacteria  normal  0.312733  normal  0.0873289 
 
 
-
 
NC_007348  Reut_B3734  phenylacetic acid degradation operon negative regulatory protein PaaX  29.72 
 
 
307 aa  105  8e-22  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8420  putative transcriptional regulator, PaaX family  32.93 
 
 
260 aa  102  7e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  0.289328  normal 
 
 
-
 
NC_011662  Tmz1t_1514  transcriptional regulator, PaaX family  33.07 
 
 
316 aa  100  3e-20  Thauera sp. MZ1T  Bacteria  normal  0.139923  n/a   
 
 
-
 
NC_011662  Tmz1t_0196  transcriptional regulator, PaaX family  29.64 
 
 
319 aa  99.8  4e-20  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0216  PaaX family transcriptional regulator  28.79 
 
 
311 aa  98.6  9e-20  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0165647 
 
 
-
 
CP001637  EcDH1_2246  transcriptional regulator, PaaX family  30 
 
 
316 aa  98.2  1e-19  Escherichia coli DH1  Bacteria  normal  0.218129  n/a   
 
 
-
 
NC_014165  Tbis_1609  PaaX family transcriptional regulator  29.71 
 
 
258 aa  98.2  1e-19  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0386  phenylacetic acid degradation operon negative regulatory protein PaaX  29.24 
 
 
352 aa  98.6  1e-19  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000187716  normal  0.0170462 
 
 
-
 
NC_010468  EcolC_2256  PaaX family transcriptional regulator  30 
 
 
316 aa  97.8  2e-19  Escherichia coli ATCC 8739  Bacteria  normal  0.203735  normal 
 
 
-
 
NC_009800  EcHS_A1486  phenylacetic acid degradation operon negative regulatory protein PaaX  30 
 
 
316 aa  97.8  2e-19  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1585  phenylacetic acid degradation operon negative regulatory protein PaaX  29.76 
 
 
316 aa  97.1  3e-19  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_5523  transcriptional regulator, PaaX family  33.33 
 
 
267 aa  91.7  1e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.543092 
 
 
-
 
NC_009832  Spro_3083  PaaX family transcriptional regulator  28.63 
 
 
312 aa  90.5  2e-17  Serratia proteamaculans 568  Bacteria  normal  normal  0.415086 
 
 
-
 
NC_008699  Noca_1206  PaaX domain-containing protein, C- domain  34.91 
 
 
258 aa  89.4  5e-17  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0294  transcriptional regulator, PaaX family  29.49 
 
 
318 aa  88.6  1e-16  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0429653  hitchhiker  0.0000864342 
 
 
-
 
NC_013159  Svir_19070  phenylacetic acid-responsive transcriptional repressor  28.63 
 
 
292 aa  87  3e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.0202563  normal 
 
 
-
 
NC_009485  BBta_2864  phenylacetic acid degradation operon negative regulatory protein paaX  27.09 
 
 
293 aa  85.9  6e-16  Bradyrhizobium sp. BTAi1  Bacteria  decreased coverage  0.00499823  normal  0.0484276 
 
 
-
 
NC_009720  Xaut_0895  PaaX family transcriptional regulator  25.55 
 
 
305 aa  84  0.000000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.947925  normal 
 
 
-
 
NC_014151  Cfla_0289  transcriptional regulator, PaaX family  30.38 
 
 
280 aa  80.5  0.00000000000003  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.010887  hitchhiker  0.0000784974 
 
 
-
 
NC_013530  Xcel_0309  transcriptional regulator, PaaX family  27.95 
 
 
302 aa  79.7  0.00000000000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0692  phenylacetic acid degradation operon negative regulatory protein PaaX  27.98 
 
 
287 aa  77.4  0.0000000000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.717402  normal 
 
 
-
 
NC_013131  Caci_4899  transcriptional regulator, PaaX family  28.26 
 
 
276 aa  77.8  0.0000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.425131  normal 
 
 
-
 
NC_008709  Ping_0661  PaaX domain-containing protein, C- domain  22.01 
 
 
285 aa  76.3  0.0000000000004  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1685  PaaX family transcriptional regulator  27.64 
 
 
333 aa  76.3  0.0000000000005  Frankia sp. EAN1pec  Bacteria  normal  0.0710641  normal  0.260669 
 
 
-
 
NC_014151  Cfla_2025  transcriptional regulator, PaaX family  28.45 
 
 
306 aa  72.4  0.000000000006  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4146  PaaX family transcriptional regulator  26.67 
 
 
305 aa  66.6  0.0000000003  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.85173 
 
 
-
 
NC_011894  Mnod_7200  transcriptional regulator, PaaX family  28.39 
 
 
292 aa  65.9  0.0000000007  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.803046  n/a   
 
 
-
 
NC_009338  Mflv_5085  PaaX domain-containing protein, C- domain  27.35 
 
 
244 aa  62  0.000000009  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.706044 
 
 
-
 
NC_011894  Mnod_3357  transcriptional regulator, PaaX family  42.03 
 
 
301 aa  60.5  0.00000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0977  PaaX-like protein  25.31 
 
 
243 aa  59.7  0.00000004  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_1005  PaaX domain-containing protein, C- domain  25.31 
 
 
243 aa  59.7  0.00000004  Mycobacterium sp. JLS  Bacteria  normal  normal  0.457167 
 
 
-
 
NC_008705  Mkms_0995  PaaX domain-containing protein, C- domain  25.31 
 
 
243 aa  59.7  0.00000004  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008688  Pden_4812  PaaX domain-containing protein  29.44 
 
 
284 aa  60.1  0.00000004  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.33483 
 
 
-
 
NC_008726  Mvan_1271  PaaX domain-containing protein, C- domain  27.56 
 
 
237 aa  58.9  0.00000008  Mycobacterium vanbaalenii PYR-1  Bacteria  decreased coverage  0.00141132  normal 
 
 
-
 
NC_009664  Krad_2878  putative transcriptional regulator, PaaX family  29.47 
 
 
263 aa  57.8  0.0000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.212697  normal  0.21699 
 
 
-
 
NC_009484  Acry_0094  PaaX family transcriptional regulator  26.27 
 
 
289 aa  55.8  0.0000006  Acidiphilium cryptum JF-5  Bacteria  normal  0.339453  n/a   
 
 
-
 
NC_010571  Oter_1864  PaaX family transcriptional regulator  29.69 
 
 
252 aa  55.8  0.0000006  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3784  putative transcriptional regulator, PaaX family  27.4 
 
 
277 aa  52.4  0.000008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_4285  PaaX domain protein protein domain protein  27.51 
 
 
244 aa  50.4  0.00003  Gordonia bronchialis DSM 43247  Bacteria  normal  0.246767  n/a   
 
 
-
 
NC_009565  TBFG_10688  hypothetical protein  24.24 
 
 
240 aa  49.3  0.00006  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4282  putative transcriptional regulator, PaaX family  28.97 
 
 
254 aa  44.3  0.002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.399485  n/a   
 
 
-
 
NC_009956  Dshi_3828  PaaX family transcriptional regulator  25.31 
 
 
264 aa  42.4  0.007  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.648927  normal 
 
 
-
 
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