135 homologs were found in PanDaTox collection
for query gene Memar_1085 on replicon NC_009051
Organism: Methanoculleus marisnigri JR1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009051  Memar_1085  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  100 
 
 
393 aa  796    Methanoculleus marisnigri JR1  Archaea  normal  0.136979  n/a   
 
 
-
 
NC_009712  Mboo_0772  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  75.06 
 
 
393 aa  601  1.0000000000000001e-171  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.58783 
 
 
-
 
NC_007796  Mhun_1628  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  74.3 
 
 
393 aa  587  1e-166  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_1036  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  73.79 
 
 
393 aa  585  1e-166  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_008942  Mlab_0996  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  66.75 
 
 
403 aa  553  1e-156  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.566431 
 
 
-
 
NC_007955  Mbur_1994  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  65.4 
 
 
396 aa  535  1e-151  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0935  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  64.89 
 
 
392 aa  514  1e-144  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.0033619  normal 
 
 
-
 
NC_008553  Mthe_0988  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  61.07 
 
 
392 aa  473  1e-132  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_0614  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  41.01 
 
 
391 aa  264  2e-69  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A2060  formaldehyde-activating enzyme  51.59 
 
 
178 aa  161  1e-38  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.189028  normal  0.41416 
 
 
-
 
NC_014148  Plim_1285  formaldehyde-activating enzyme  50.62 
 
 
165 aa  159  9e-38  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0367  formaldehyde-activating enzyme  50.32 
 
 
160 aa  157  4e-37  Methanococcoides burtonii DSM 6242  Archaea  normal  0.203725  n/a   
 
 
-
 
NC_011894  Mnod_6007  formaldehyde-activating enzyme  47.13 
 
 
171 aa  147  3e-34  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.100814  n/a   
 
 
-
 
NC_010511  M446_5783  formaldehyde-activating enzyme  47.77 
 
 
171 aa  147  5e-34  Methylobacterium sp. 4-46  Bacteria  normal  0.0971644  normal 
 
 
-
 
NC_009720  Xaut_0032  formaldehyde-activating protein  47.13 
 
 
169 aa  144  4e-33  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.848098 
 
 
-
 
NC_010505  Mrad2831_0533  formaldehyde-activating enzyme  45.51 
 
 
170 aa  142  9.999999999999999e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1785  formaldehyde-activating enzyme  44.87 
 
 
170 aa  141  1.9999999999999998e-32  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA2866  formaldehyde-activating enzyme  47.13 
 
 
170 aa  140  3.9999999999999997e-32  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2436  formaldehyde-activating protein  46.5 
 
 
169 aa  139  1e-31  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.397979 
 
 
-
 
NC_008825  Mpe_A2612  formaldehyde-activating enzyme  45.22 
 
 
169 aa  138  2e-31  Methylibium petroleiphilum PM1  Bacteria  normal  0.0416881  normal 
 
 
-
 
NC_012791  Vapar_3079  formaldehyde-activating enzyme  46.5 
 
 
170 aa  137  3.0000000000000003e-31  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2169  formaldehyde-activating enzyme  43.59 
 
 
170 aa  136  5e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.783809  normal  0.178175 
 
 
-
 
NC_010172  Mext_1834  formaldehyde-activating enzyme  43.59 
 
 
170 aa  136  5e-31  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6487  formaldehyde-activating enzyme  45.86 
 
 
169 aa  136  5e-31  Burkholderia phymatum STM815  Bacteria  normal  0.497311  normal  0.302319 
 
 
-
 
NC_011666  Msil_2390  formaldehyde-activating enzyme  46.5 
 
 
175 aa  136  6.0000000000000005e-31  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009051  Memar_0975  formaldehyde-activating enzyme  50.32 
 
 
167 aa  135  9e-31  Methanoculleus marisnigri JR1  Archaea  normal  0.0927434  n/a   
 
 
-
 
NC_009720  Xaut_1365  formaldehyde-activating protein  45.22 
 
 
191 aa  132  1.0000000000000001e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  0.745489  normal 
 
 
-
 
NC_010524  Lcho_3147  formaldehyde-activating enzyme  43.95 
 
 
169 aa  130  3e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009634  Mevan_0582  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  35.65 
 
 
437 aa  115  1.0000000000000001e-24  Methanococcus vannielii SB  Archaea  normal  0.062003  n/a   
 
 
-
 
NC_007947  Mfla_2543  formaldehyde-activating enzyme  42.17 
 
 
178 aa  114  4.0000000000000004e-24  Methylobacillus flagellatus KT  Bacteria  normal  0.234356  normal 
 
 
-
 
NC_009954  Cmaq_1871  orotidine 5'-phosphate decarboxylase  34.53 
 
 
217 aa  113  7.000000000000001e-24  Caldivirga maquilingensis IC-167  Archaea  normal  0.563194  normal  0.356021 
 
 
-
 
NC_010676  Bphyt_6933  formaldehyde-activating enzyme  37.06 
 
 
190 aa  113  7.000000000000001e-24  Burkholderia phytofirmans PsJN  Bacteria  normal  0.587797  normal 
 
 
-
 
NC_008553  Mthe_0455  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  36.67 
 
 
428 aa  110  3e-23  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007947  Mfla_1652  formaldehyde-activating enzyme  39.16 
 
 
178 aa  108  2e-22  Methylobacillus flagellatus KT  Bacteria  unclonable  0.000000000163018  normal  0.176505 
 
 
-
 
NC_009051  Memar_0744  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  34.58 
 
 
429 aa  108  2e-22  Methanoculleus marisnigri JR1  Archaea  normal  0.225207  n/a   
 
 
-
 
NC_013926  Aboo_0457  Orotidine 5'-phosphate decarboxylase  36.36 
 
 
426 aa  107  2e-22  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B2825  hypothetical protein  35.21 
 
 
174 aa  107  3e-22  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009712  Mboo_0707  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  36.84 
 
 
428 aa  107  3e-22  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.172064 
 
 
-
 
NC_010525  Tneu_0708  orotidine 5'-phosphate decarboxylase  36.22 
 
 
222 aa  107  3e-22  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.942951  normal 
 
 
-
 
NC_009637  MmarC7_0516  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  31.36 
 
 
438 aa  107  5e-22  Methanococcus maripaludis C7  Archaea  normal  0.35671  normal 
 
 
-
 
CP001800  Ssol_1184  Orotidine 5'-phosphate decarboxylase  32.24 
 
 
225 aa  106  6e-22  Sulfolobus solfataricus 98/2  Archaea  normal  0.0998927  n/a   
 
 
-
 
NC_009135  MmarC5_0321  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  31.36 
 
 
438 aa  106  7e-22  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009832  Spro_2468  formaldehyde-activating protein  38 
 
 
167 aa  105  1e-21  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA3043  hexulose-6-phosphate synthase  32.86 
 
 
215 aa  103  6e-21  Methylococcus capsulatus str. Bath  Bacteria  normal  0.146405  n/a   
 
 
-
 
NC_002977  MCA3049  hexulose-6-phosphate synthase  32.86 
 
 
215 aa  103  6e-21  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1403  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  31.53 
 
 
438 aa  102  8e-21  Methanococcus maripaludis C6  Archaea  normal  0.175956  n/a   
 
 
-
 
NC_012791  Vapar_3063  formaldehyde-activating enzyme  39.04 
 
 
177 aa  102  1e-20  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009440  Msed_0227  orotidine 5'-phosphate decarboxylase  32.58 
 
 
227 aa  102  1e-20  Metallosphaera sedula DSM 5348  Archaea  normal  decreased coverage  0.0096121 
 
 
-
 
NC_009376  Pars_1830  orotidine 5'-phosphate decarboxylase  35.57 
 
 
221 aa  100  6e-20  Pyrobaculum arsenaticum DSM 13514  Archaea  hitchhiker  0.000143542  normal  0.0955115 
 
 
-
 
NC_007947  Mfla_2524  putative formaldehyde-activating enzyme  34.3 
 
 
183 aa  99.8  8e-20  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009073  Pcal_0568  hexulose-6-phosphate synthase  39.86 
 
 
217 aa  99  1e-19  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_010623  Bphy_5474  formaldehyde-activating enzyme  36.3 
 
 
177 aa  99  1e-19  Burkholderia phymatum STM815  Bacteria  normal  0.0338658  normal  0.0655052 
 
 
-
 
NC_008698  Tpen_0372  orotidine 5'-phosphate decarboxylase  33.19 
 
 
231 aa  98.2  2e-19  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_008701  Pisl_1686  orotidine 5'-phosphate decarboxylase  40 
 
 
221 aa  98.2  2e-19  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal  0.0279692 
 
 
-
 
NC_011832  Mpal_2121  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  36.14 
 
 
428 aa  98.2  2e-19  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A1170  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  37.16 
 
 
413 aa  97.8  3e-19  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_008825  Mpe_A2627  putative formaldehyde-activating enzyme  38.36 
 
 
177 aa  97.4  3e-19  Methylibium petroleiphilum PM1  Bacteria  normal  0.212894  normal 
 
 
-
 
NC_007796  Mhun_0647  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  32.37 
 
 
429 aa  95.9  1e-18  Methanospirillum hungatei JF-1  Archaea  normal  0.101947  normal  0.0867495 
 
 
-
 
NC_009708  YpsIP31758_1542  hypothetical protein  38.16 
 
 
167 aa  95.9  1e-18  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1651  formaldehyde-activating enzyme  38.16 
 
 
167 aa  95.9  1e-18  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2738  hexulose-6-phosphate synthase/SIS domain-containing protein  33.02 
 
 
389 aa  95.1  2e-18  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3708  hexulose-6-phosphate synthase  32.51 
 
 
207 aa  95.1  2e-18  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_1453  bifunctional hexulose-6-phosphate synthase/ribonuclease regulator  33.33 
 
 
427 aa  95.5  2e-18  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.395706 
 
 
-
 
NC_010159  YpAngola_A1721  hypothetical protein  38.16 
 
 
167 aa  94.7  2e-18  Yersinia pestis Angola  Bacteria  normal  0.054067  hitchhiker  0.00446803 
 
 
-
 
NC_010524  Lcho_3132  formaldehyde-activating enzyme  39.26 
 
 
181 aa  95.1  2e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011083  SeHA_C2929  3-hexulose-6-phosphate synthase  34.21 
 
 
211 aa  90.5  5e-17  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  hitchhiker  0.0000000015488 
 
 
-
 
NC_007947  Mfla_1654  orotidine 5'-phosphate decarboxylase  33.68 
 
 
209 aa  88.6  2e-16  Methylobacillus flagellatus KT  Bacteria  unclonable  0.000000000168104  normal  0.271517 
 
 
-
 
NC_007947  Mfla_2364  putative formaldehyde-activating enzyme  30.67 
 
 
182 aa  88.2  2e-16  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000000204771  normal  0.719365 
 
 
-
 
NC_007947  Mfla_0250  hexulose-6-phosphate synthase  33.33 
 
 
228 aa  88.2  3e-16  Methylobacillus flagellatus KT  Bacteria  unclonable  0.00000000013709  normal  0.0274377 
 
 
-
 
NC_013132  Cpin_5671  Orotidine 5'-phosphate decarboxylase  39.13 
 
 
211 aa  83.2  0.000000000000007  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.587401 
 
 
-
 
NC_002976  SERP0216  hexulose-6-phosphate synthase, putative  28.71 
 
 
210 aa  79.3  0.0000000000001  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_3519  formaldehyde-activating enzyme  30.25 
 
 
211 aa  79  0.0000000000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2016  formaldehyde-activating enzyme  32.88 
 
 
179 aa  79  0.0000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.560353  normal  0.585828 
 
 
-
 
NC_013517  Sterm_1849  3-hexulose-6-phosphate synthase  32.93 
 
 
212 aa  78.2  0.0000000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4915  formaldehyde-activating enzyme  31.51 
 
 
181 aa  77.4  0.0000000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.090523  n/a   
 
 
-
 
NC_010511  M446_4369  formaldehyde-activating enzyme  31.51 
 
 
181 aa  77.4  0.0000000000004  Methylobacterium sp. 4-46  Bacteria  normal  0.279882  normal 
 
 
-
 
NC_009477  SaurJH9_2736  orotidine 5'-phosphate decarboxylase  27.94 
 
 
210 aa  76.6  0.0000000000007  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009619  SaurJH1_2812  orotidine 5'-phosphate decarboxylase  27.94 
 
 
210 aa  76.6  0.0000000000007  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0593  orotidine 5'-phosphate decarboxylase  27.59 
 
 
210 aa  75.5  0.000000000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0607  orotidine 5'-phosphate decarboxylase  27.59 
 
 
210 aa  75.5  0.000000000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1627  formaldehyde-activating protein  29.45 
 
 
179 aa  75.1  0.000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  0.67854  normal 
 
 
-
 
NC_011757  Mchl_1725  formaldehyde-activating enzyme  28.77 
 
 
179 aa  73.9  0.000000000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.393787  normal  0.0143668 
 
 
-
 
NC_010172  Mext_1450  formaldehyde-activating enzyme  28.77 
 
 
179 aa  73.9  0.000000000004  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.485811 
 
 
-
 
NC_010725  Mpop_1445  formaldehyde-activating enzyme  28.77 
 
 
179 aa  73.9  0.000000000005  Methylobacterium populi BJ001  Bacteria  normal  normal  0.318243 
 
 
-
 
NC_013526  Tter_2273  Orotidine 5'-phosphate decarboxylase  35.25 
 
 
240 aa  73.6  0.000000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1799  formaldehyde-activating enzyme  32.19 
 
 
178 aa  72.8  0.000000000009  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_013517  Sterm_3212  3-hexulose-6-phosphate synthase  27.44 
 
 
211 aa  72.4  0.00000000001  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3465  Formaldehyde-activating enzyme (Fae)  27.16 
 
 
182 aa  72.4  0.00000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.719607  normal 
 
 
-
 
NC_010172  Mext_3143  formaldehyde-activating protein  27.16 
 
 
182 aa  72.4  0.00000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.389753  normal  0.873661 
 
 
-
 
NC_010725  Mpop_3340  Formaldehyde-activating enzyme (Fae)  27.16 
 
 
182 aa  71.6  0.00000000002  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3403  Formaldehyde-activating enzyme (Fae)  26.54 
 
 
182 aa  70.9  0.00000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4467  formaldehyde-activating protein  28.4 
 
 
182 aa  70.9  0.00000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.164696 
 
 
-
 
CP001509  ECD_03433  3-keto-L-gulonate 6-phosphate decarboxylase  29.05 
 
 
220 aa  68.2  0.0000000002  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03384  hypothetical protein  29.05 
 
 
220 aa  68.2  0.0000000002  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B3889  3-keto-L-gulonate-6-phosphate decarboxylase  28.16 
 
 
220 aa  67.8  0.0000000003  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C3998  3-keto-L-gulonate-6-phosphate decarboxylase  28.37 
 
 
220 aa  67.4  0.0000000004  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.92923 
 
 
-
 
NC_011094  SeSA_A3873  3-keto-L-gulonate-6-phosphate decarboxylase  28.16 
 
 
216 aa  67.4  0.0000000004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_3904  3-keto-L-gulonate-6-phosphate decarboxylase  29.05 
 
 
220 aa  67  0.0000000005  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
CP001637  EcDH1_0129  3-dehydro-L-gulonate-6-phosphate decarboxylase  28.57 
 
 
220 aa  66.6  0.0000000006  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0133  3-keto-L-gulonate-6-phosphate decarboxylase  28.57 
 
 
220 aa  66.6  0.0000000006  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
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