57 homologs were found in PanDaTox collection
for query gene Mchl_2169 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011757  Mchl_2169  formaldehyde-activating enzyme  100 
 
 
170 aa  350  5e-96  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.783809  normal  0.178175 
 
 
-
 
NC_010172  Mext_1834  formaldehyde-activating enzyme  100 
 
 
170 aa  350  5e-96  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_0533  formaldehyde-activating enzyme  97.06 
 
 
170 aa  340  4e-93  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1785  formaldehyde-activating enzyme  97.06 
 
 
170 aa  340  8e-93  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6007  formaldehyde-activating enzyme  86.39 
 
 
171 aa  306  1.0000000000000001e-82  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.100814  n/a   
 
 
-
 
NC_010511  M446_5783  formaldehyde-activating enzyme  85.8 
 
 
171 aa  305  3e-82  Methylobacterium sp. 4-46  Bacteria  normal  0.0971644  normal 
 
 
-
 
NC_009720  Xaut_0032  formaldehyde-activating protein  82.74 
 
 
169 aa  289  1e-77  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.848098 
 
 
-
 
NC_002977  MCA2866  formaldehyde-activating enzyme  72.19 
 
 
170 aa  255  2e-67  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2436  formaldehyde-activating protein  71.01 
 
 
169 aa  254  3e-67  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.397979 
 
 
-
 
NC_010625  Bphy_6487  formaldehyde-activating enzyme  70.41 
 
 
169 aa  254  6e-67  Burkholderia phymatum STM815  Bacteria  normal  0.497311  normal  0.302319 
 
 
-
 
NC_008825  Mpe_A2612  formaldehyde-activating enzyme  71.43 
 
 
169 aa  248  3e-65  Methylibium petroleiphilum PM1  Bacteria  normal  0.0416881  normal 
 
 
-
 
NC_011666  Msil_2390  formaldehyde-activating enzyme  70.41 
 
 
175 aa  246  1e-64  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009720  Xaut_1365  formaldehyde-activating protein  68.05 
 
 
191 aa  241  3.9999999999999997e-63  Xanthobacter autotrophicus Py2  Bacteria  normal  0.745489  normal 
 
 
-
 
NC_012791  Vapar_3079  formaldehyde-activating enzyme  68.05 
 
 
170 aa  239  1e-62  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3147  formaldehyde-activating enzyme  66.47 
 
 
169 aa  229  1e-59  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_014148  Plim_1285  formaldehyde-activating enzyme  59.75 
 
 
165 aa  200  7e-51  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1652  formaldehyde-activating enzyme  57.06 
 
 
178 aa  193  8.000000000000001e-49  Methylobacillus flagellatus KT  Bacteria  unclonable  0.000000000163018  normal  0.176505 
 
 
-
 
NC_007947  Mfla_2543  formaldehyde-activating enzyme  57.87 
 
 
178 aa  192  2e-48  Methylobacillus flagellatus KT  Bacteria  normal  0.234356  normal 
 
 
-
 
NC_007355  Mbar_A2060  formaldehyde-activating enzyme  54.27 
 
 
178 aa  188  4e-47  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.189028  normal  0.41416 
 
 
-
 
NC_007955  Mbur_0367  formaldehyde-activating enzyme  54.09 
 
 
160 aa  184  4e-46  Methanococcoides burtonii DSM 6242  Archaea  normal  0.203725  n/a   
 
 
-
 
NC_009051  Memar_0975  formaldehyde-activating enzyme  57.23 
 
 
167 aa  171  3.9999999999999995e-42  Methanoculleus marisnigri JR1  Archaea  normal  0.0927434  n/a   
 
 
-
 
NC_007955  Mbur_1994  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  47.44 
 
 
396 aa  154  5.0000000000000005e-37  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0935  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  50.32 
 
 
392 aa  149  1e-35  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.0033619  normal 
 
 
-
 
NC_008553  Mthe_0988  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  51.59 
 
 
392 aa  145  3e-34  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_011832  Mpal_1036  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  45.22 
 
 
393 aa  141  5e-33  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_009712  Mboo_0772  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  41.03 
 
 
393 aa  130  7.999999999999999e-30  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.58783 
 
 
-
 
NC_008942  Mlab_0996  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  41.67 
 
 
403 aa  130  1.0000000000000001e-29  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.566431 
 
 
-
 
NC_009051  Memar_1085  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  43.59 
 
 
393 aa  127  7.000000000000001e-29  Methanoculleus marisnigri JR1  Archaea  normal  0.136979  n/a   
 
 
-
 
NC_007796  Mhun_1628  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  44.23 
 
 
393 aa  118  3.9999999999999996e-26  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B2825  hypothetical protein  29.19 
 
 
174 aa  85.1  4e-16  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2627  putative formaldehyde-activating enzyme  36.05 
 
 
177 aa  84.3  6e-16  Methylibium petroleiphilum PM1  Bacteria  normal  0.212894  normal 
 
 
-
 
NC_010676  Bphyt_6933  formaldehyde-activating enzyme  29.75 
 
 
190 aa  84  9e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  0.587797  normal 
 
 
-
 
NC_007947  Mfla_2524  putative formaldehyde-activating enzyme  35.43 
 
 
183 aa  81.6  0.000000000000004  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1445  formaldehyde-activating enzyme  33.56 
 
 
179 aa  81.6  0.000000000000004  Methylobacterium populi BJ001  Bacteria  normal  normal  0.318243 
 
 
-
 
NC_012791  Vapar_3063  formaldehyde-activating enzyme  35.62 
 
 
177 aa  81.6  0.000000000000005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1627  formaldehyde-activating protein  33.56 
 
 
179 aa  81.3  0.000000000000006  Xanthobacter autotrophicus Py2  Bacteria  normal  0.67854  normal 
 
 
-
 
NC_010623  Bphy_5474  formaldehyde-activating enzyme  34.01 
 
 
177 aa  81.3  0.000000000000006  Burkholderia phymatum STM815  Bacteria  normal  0.0338658  normal  0.0655052 
 
 
-
 
NC_011894  Mnod_4915  formaldehyde-activating enzyme  33.56 
 
 
181 aa  80.9  0.000000000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.090523  n/a   
 
 
-
 
NC_010172  Mext_1450  formaldehyde-activating enzyme  32.88 
 
 
179 aa  79.7  0.00000000000002  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.485811 
 
 
-
 
NC_011757  Mchl_1725  formaldehyde-activating enzyme  32.88 
 
 
179 aa  79.7  0.00000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.393787  normal  0.0143668 
 
 
-
 
NC_010511  M446_4369  formaldehyde-activating enzyme  32.88 
 
 
181 aa  79.3  0.00000000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.279882  normal 
 
 
-
 
NC_009832  Spro_2468  formaldehyde-activating protein  28.57 
 
 
167 aa  77.4  0.00000000000008  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA2778  formaldehyde-activating domain-containing protein  48.75 
 
 
119 aa  76.3  0.0000000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2016  formaldehyde-activating enzyme  30.82 
 
 
179 aa  75.9  0.0000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.560353  normal  0.585828 
 
 
-
 
NC_010524  Lcho_3132  formaldehyde-activating enzyme  34.36 
 
 
181 aa  75.5  0.0000000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007947  Mfla_2364  putative formaldehyde-activating enzyme  31.14 
 
 
182 aa  74.7  0.0000000000005  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000000204771  normal  0.719365 
 
 
-
 
NC_011666  Msil_1799  formaldehyde-activating enzyme  30.12 
 
 
178 aa  74.3  0.0000000000007  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010465  YPK_1651  formaldehyde-activating enzyme  28.57 
 
 
167 aa  73.2  0.000000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1721  hypothetical protein  28.57 
 
 
167 aa  72.8  0.000000000002  Yersinia pestis Angola  Bacteria  normal  0.054067  hitchhiker  0.00446803 
 
 
-
 
NC_009708  YpsIP31758_1542  hypothetical protein  28.57 
 
 
167 aa  73.2  0.000000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3465  Formaldehyde-activating enzyme (Fae)  25.75 
 
 
182 aa  66.6  0.0000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.719607  normal 
 
 
-
 
NC_010172  Mext_3143  formaldehyde-activating protein  25.75 
 
 
182 aa  66.6  0.0000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.389753  normal  0.873661 
 
 
-
 
NC_010725  Mpop_3340  Formaldehyde-activating enzyme (Fae)  25.75 
 
 
182 aa  65.5  0.0000000004  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3403  Formaldehyde-activating enzyme (Fae)  24.86 
 
 
182 aa  65.1  0.0000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4467  formaldehyde-activating protein  25.75 
 
 
182 aa  63.5  0.000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.164696 
 
 
-
 
NC_009635  Maeo_0614  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  30.12 
 
 
391 aa  62.4  0.000000003  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_014148  Plim_3519  formaldehyde-activating enzyme  27.11 
 
 
211 aa  61.2  0.000000006  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
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