7 homologs were found in PanDaTox collection
for query gene MADE_02311 on replicon NC_011138
Organism: Alteromonas macleodii 'Deep ecotype'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011138  MADE_02311  hypothetical protein  100 
 
 
173 aa  343  6e-94  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.00000119762  n/a   
 
 
-
 
NC_008228  Patl_0778  transmembrane prediction  80.14 
 
 
574 aa  210  5.999999999999999e-54  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00747802  n/a   
 
 
-
 
NC_008345  Sfri_1901  putative nucleoside transport protein  76.52 
 
 
578 aa  181  3e-45  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_26970  hypothetical protein-transmembrane prediction  79.03 
 
 
593 aa  176  1e-43  Azotobacter vinelandii DJ  Bacteria  normal  0.65165  n/a   
 
 
-
 
NC_013501  Rmar_0690  transmembrane prediction  45.75 
 
 
471 aa  107  1e-22  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1348  transmembrane prediction  48.09 
 
 
460 aa  104  5e-22  Opitutus terrae PB90-1  Bacteria  normal  0.203481  normal 
 
 
-
 
NC_008709  Ping_1626  glutamyl-tRNA synthetase  72 
 
 
470 aa  42  0.004  Psychromonas ingrahamii 37  Bacteria  normal  0.0744892  normal  0.201462 
 
 
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