56 homologs were found in PanDaTox collection
for query gene M446_4369 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_4369  formaldehyde-activating enzyme  100 
 
 
181 aa  372  1e-102  Methylobacterium sp. 4-46  Bacteria  normal  0.279882  normal 
 
 
-
 
NC_011894  Mnod_4915  formaldehyde-activating enzyme  93.89 
 
 
181 aa  350  4e-96  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.090523  n/a   
 
 
-
 
NC_010505  Mrad2831_2016  formaldehyde-activating enzyme  89.94 
 
 
179 aa  336  9e-92  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.560353  normal  0.585828 
 
 
-
 
NC_010725  Mpop_1445  formaldehyde-activating enzyme  87.71 
 
 
179 aa  328  2e-89  Methylobacterium populi BJ001  Bacteria  normal  normal  0.318243 
 
 
-
 
NC_010172  Mext_1450  formaldehyde-activating enzyme  87.15 
 
 
179 aa  327  7e-89  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.485811 
 
 
-
 
NC_011757  Mchl_1725  formaldehyde-activating enzyme  87.15 
 
 
179 aa  327  7e-89  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.393787  normal  0.0143668 
 
 
-
 
NC_009720  Xaut_1627  formaldehyde-activating protein  82.12 
 
 
179 aa  309  1e-83  Xanthobacter autotrophicus Py2  Bacteria  normal  0.67854  normal 
 
 
-
 
NC_011666  Msil_1799  formaldehyde-activating enzyme  74.16 
 
 
178 aa  283  8e-76  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_012791  Vapar_3063  formaldehyde-activating enzyme  64.46 
 
 
177 aa  243  9.999999999999999e-64  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2627  putative formaldehyde-activating enzyme  64.24 
 
 
177 aa  241  3.9999999999999997e-63  Methylibium petroleiphilum PM1  Bacteria  normal  0.212894  normal 
 
 
-
 
NC_010623  Bphy_5474  formaldehyde-activating enzyme  64.29 
 
 
177 aa  240  6e-63  Burkholderia phymatum STM815  Bacteria  normal  0.0338658  normal  0.0655052 
 
 
-
 
NC_010524  Lcho_3132  formaldehyde-activating enzyme  65.45 
 
 
181 aa  240  7.999999999999999e-63  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007947  Mfla_2524  putative formaldehyde-activating enzyme  56.18 
 
 
183 aa  222  3e-57  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_3519  formaldehyde-activating enzyme  41.67 
 
 
211 aa  138  3e-32  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2364  putative formaldehyde-activating enzyme  39.05 
 
 
182 aa  131  5e-30  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.000000204771  normal  0.719365 
 
 
-
 
NC_011894  Mnod_3403  Formaldehyde-activating enzyme (Fae)  37.21 
 
 
182 aa  117  9.999999999999999e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3340  Formaldehyde-activating enzyme (Fae)  36.31 
 
 
182 aa  116  1.9999999999999998e-25  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4467  formaldehyde-activating protein  35.71 
 
 
182 aa  115  3.9999999999999997e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.164696 
 
 
-
 
NC_010172  Mext_3143  formaldehyde-activating protein  35.23 
 
 
182 aa  114  6e-25  Methylobacterium extorquens PA1  Bacteria  normal  0.389753  normal  0.873661 
 
 
-
 
NC_011757  Mchl_3465  Formaldehyde-activating enzyme (Fae)  35.71 
 
 
182 aa  114  8.999999999999998e-25  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.719607  normal 
 
 
-
 
NC_014148  Plim_1285  formaldehyde-activating enzyme  40.36 
 
 
165 aa  112  2.0000000000000002e-24  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0367  formaldehyde-activating enzyme  36.3 
 
 
160 aa  101  5e-21  Methanococcoides burtonii DSM 6242  Archaea  normal  0.203725  n/a   
 
 
-
 
NC_007355  Mbar_A2060  formaldehyde-activating enzyme  36.3 
 
 
178 aa  99.4  3e-20  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.189028  normal  0.41416 
 
 
-
 
NC_007955  Mbur_1994  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  35.62 
 
 
396 aa  97.1  1e-19  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_011832  Mpal_1036  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  35.95 
 
 
393 aa  89.7  2e-17  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_008553  Mthe_0988  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  35.12 
 
 
392 aa  88.6  4e-17  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_010511  M446_5783  formaldehyde-activating enzyme  34.36 
 
 
171 aa  86.7  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.0971644  normal 
 
 
-
 
NC_011894  Mnod_6007  formaldehyde-activating enzyme  34.25 
 
 
171 aa  85.5  3e-16  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.100814  n/a   
 
 
-
 
NC_009712  Mboo_0772  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  34.73 
 
 
393 aa  85.1  5e-16  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.58783 
 
 
-
 
NC_009051  Memar_0975  formaldehyde-activating enzyme  37.67 
 
 
167 aa  82.8  0.000000000000003  Methanoculleus marisnigri JR1  Archaea  normal  0.0927434  n/a   
 
 
-
 
NC_008942  Mlab_0996  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  32.74 
 
 
403 aa  81.3  0.000000000000008  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.566431 
 
 
-
 
NC_010505  Mrad2831_0533  formaldehyde-activating enzyme  32.19 
 
 
170 aa  80.5  0.00000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2390  formaldehyde-activating enzyme  32.19 
 
 
175 aa  80.1  0.00000000000002  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010725  Mpop_1785  formaldehyde-activating enzyme  32.19 
 
 
170 aa  80.1  0.00000000000002  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2169  formaldehyde-activating enzyme  32.88 
 
 
170 aa  79.3  0.00000000000003  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.783809  normal  0.178175 
 
 
-
 
NC_010172  Mext_1834  formaldehyde-activating enzyme  32.88 
 
 
170 aa  79.3  0.00000000000003  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A0935  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  34.52 
 
 
392 aa  78.6  0.00000000000004  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.0033619  normal 
 
 
-
 
NC_009720  Xaut_1365  formaldehyde-activating protein  31.94 
 
 
191 aa  75.5  0.0000000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.745489  normal 
 
 
-
 
NC_008825  Mpe_A2612  formaldehyde-activating enzyme  32.19 
 
 
169 aa  75.5  0.0000000000004  Methylibium petroleiphilum PM1  Bacteria  normal  0.0416881  normal 
 
 
-
 
NC_007796  Mhun_1628  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  34.73 
 
 
393 aa  74.7  0.0000000000007  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007952  Bxe_B2436  formaldehyde-activating protein  31.51 
 
 
169 aa  74.3  0.0000000000008  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.397979 
 
 
-
 
NC_002977  MCA2866  formaldehyde-activating enzyme  32.64 
 
 
170 aa  73.6  0.000000000001  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6487  formaldehyde-activating enzyme  30.28 
 
 
169 aa  73.6  0.000000000002  Burkholderia phymatum STM815  Bacteria  normal  0.497311  normal  0.302319 
 
 
-
 
NC_009720  Xaut_0032  formaldehyde-activating protein  32.19 
 
 
169 aa  73.2  0.000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.848098 
 
 
-
 
NC_010524  Lcho_3147  formaldehyde-activating enzyme  36.91 
 
 
169 aa  72.4  0.000000000003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009832  Spro_2468  formaldehyde-activating protein  33.58 
 
 
167 aa  69.3  0.00000000003  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3079  formaldehyde-activating enzyme  31.51 
 
 
170 aa  69.3  0.00000000003  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6933  formaldehyde-activating enzyme  29.45 
 
 
190 aa  68.2  0.00000000007  Burkholderia phytofirmans PsJN  Bacteria  normal  0.587797  normal 
 
 
-
 
NC_007947  Mfla_1652  formaldehyde-activating enzyme  27.81 
 
 
178 aa  67.4  0.0000000001  Methylobacillus flagellatus KT  Bacteria  unclonable  0.000000000163018  normal  0.176505 
 
 
-
 
NC_009051  Memar_1085  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  31.51 
 
 
393 aa  65.5  0.0000000004  Methanoculleus marisnigri JR1  Archaea  normal  0.136979  n/a   
 
 
-
 
NC_007511  Bcep18194_B2825  hypothetical protein  27.4 
 
 
174 aa  63.9  0.000000001  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1542  hypothetical protein  31.39 
 
 
167 aa  59.7  0.00000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1651  formaldehyde-activating enzyme  31.39 
 
 
167 aa  59.7  0.00000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1721  hypothetical protein  31.39 
 
 
167 aa  59.3  0.00000003  Yersinia pestis Angola  Bacteria  normal  0.054067  hitchhiker  0.00446803 
 
 
-
 
NC_007947  Mfla_2543  formaldehyde-activating enzyme  27.46 
 
 
178 aa  57.4  0.0000001  Methylobacillus flagellatus KT  Bacteria  normal  0.234356  normal 
 
 
-
 
NC_009635  Maeo_0614  bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase  29.94 
 
 
391 aa  51.6  0.000005  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
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