More than 300 homologs were found in PanDaTox collection
for query gene M446_3566 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_3566  short-chain dehydrogenase/reductase SDR  100 
 
 
269 aa  516  1.0000000000000001e-145  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.138362 
 
 
-
 
NC_012850  Rleg_3582  short-chain dehydrogenase/reductase SDR  67.8 
 
 
265 aa  358  5e-98  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.15353 
 
 
-
 
NC_007511  Bcep18194_B1706  Short-chain dehydrogenase/reductase SDR  67.94 
 
 
266 aa  353  2e-96  Burkholderia sp. 383  Bacteria  normal  0.951732  normal 
 
 
-
 
NC_008391  Bamb_3723  short-chain dehydrogenase/reductase SDR  67.94 
 
 
266 aa  351  8e-96  Burkholderia ambifaria AMMD  Bacteria  normal  0.662669  normal  0.858524 
 
 
-
 
NC_008061  Bcen_4061  short-chain dehydrogenase/reductase SDR  67.94 
 
 
281 aa  350  1e-95  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.786818  n/a   
 
 
-
 
NC_010623  Bphy_4200  short-chain dehydrogenase/reductase SDR  68.34 
 
 
271 aa  350  1e-95  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_4305  short-chain dehydrogenase/reductase SDR  67.94 
 
 
281 aa  350  1e-95  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.699263 
 
 
-
 
NC_010515  Bcenmc03_3212  short-chain dehydrogenase/reductase SDR  67.94 
 
 
266 aa  349  3e-95  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.177624  normal 
 
 
-
 
NC_010552  BamMC406_4199  short-chain dehydrogenase/reductase SDR  67.56 
 
 
266 aa  349  3e-95  Burkholderia ambifaria MC40-6  Bacteria  normal  0.308915  normal  0.0922746 
 
 
-
 
NC_011368  Rleg2_5185  short-chain dehydrogenase/reductase SDR  65.02 
 
 
285 aa  345  3e-94  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4523  short-chain dehydrogenase/reductase SDR  67.92 
 
 
266 aa  343  2e-93  Cupriavidus metallidurans CH34  Bacteria  normal  0.642907  decreased coverage  0.0040913 
 
 
-
 
NC_010086  Bmul_4300  short-chain dehydrogenase/reductase SDR  66.03 
 
 
266 aa  337  9.999999999999999e-92  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.498015  normal 
 
 
-
 
NC_011666  Msil_0129  short-chain dehydrogenase/reductase SDR  66.16 
 
 
271 aa  337  9.999999999999999e-92  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011894  Mnod_1035  short-chain dehydrogenase/reductase SDR  68.36 
 
 
270 aa  337  1.9999999999999998e-91  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0312813  n/a   
 
 
-
 
NC_007951  Bxe_A4474  putative short-chain dehydrogenase/reductase SDR  64.64 
 
 
270 aa  336  2.9999999999999997e-91  Burkholderia xenovorans LB400  Bacteria  normal  hitchhiker  0.000662369 
 
 
-
 
NC_010681  Bphyt_3970  short-chain dehydrogenase/reductase SDR  62.31 
 
 
270 aa  329  3e-89  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5531  short-chain dehydrogenase/reductase SDR  61.05 
 
 
269 aa  325  4.0000000000000003e-88  Sinorhizobium medicae WSM419  Bacteria  normal  0.356237  normal  0.14087 
 
 
-
 
NC_009485  BBta_3264  putative oxidoreductase protein  62.36 
 
 
264 aa  322  5e-87  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.724633  normal 
 
 
-
 
NC_012858  Rleg_6849  short-chain dehydrogenase/reductase SDR  60.53 
 
 
269 aa  320  1.9999999999999998e-86  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.674583 
 
 
-
 
NC_010725  Mpop_0718  short-chain dehydrogenase/reductase SDR  68.09 
 
 
263 aa  319  3e-86  Methylobacterium populi BJ001  Bacteria  normal  0.520585  normal 
 
 
-
 
NC_008048  Sala_0082  short-chain dehydrogenase/reductase SDR  63.26 
 
 
269 aa  317  2e-85  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1901  Short-chain dehydrogenase/reductase SDR  67.19 
 
 
266 aa  314  7e-85  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1294  short-chain dehydrogenase/reductase SDR  65.66 
 
 
266 aa  315  7e-85  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0153  short-chain dehydrogenase/reductase SDR  65.64 
 
 
262 aa  310  2e-83  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.418257  normal  0.135019 
 
 
-
 
NC_010172  Mext_0209  short-chain dehydrogenase/reductase SDR  66.02 
 
 
262 aa  308  6.999999999999999e-83  Methylobacterium extorquens PA1  Bacteria  normal  0.128983  normal 
 
 
-
 
NC_007492  Pfl01_2716  Short-chain dehydrogenase/reductase SDR  58.4 
 
 
265 aa  298  8e-80  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.490599 
 
 
-
 
NC_010322  PputGB1_3070  short-chain dehydrogenase/reductase SDR  57.95 
 
 
265 aa  293  2e-78  Pseudomonas putida GB-1  Bacteria  normal  0.0355963  normal 
 
 
-
 
NC_010505  Mrad2831_1275  short-chain dehydrogenase/reductase SDR  60.23 
 
 
271 aa  279  3e-74  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0380  short-chain dehydrogenase/reductase SDR  54.92 
 
 
265 aa  273  2.0000000000000002e-72  Methylocella silvestris BL2  Bacteria  n/a    normal  0.453235 
 
 
-
 
NC_010505  Mrad2831_4718  short-chain dehydrogenase/reductase SDR  57.84 
 
 
270 aa  271  1e-71  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5551  putative short-chain dehydrogenase  56.25 
 
 
265 aa  265  8.999999999999999e-70  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_63890  putative short-chain dehydrogenase  55.86 
 
 
265 aa  264  1e-69  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4040  Short-chain dehydrogenase/reductase SDR  54.05 
 
 
264 aa  255  5e-67  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.128419  normal  0.923094 
 
 
-
 
NC_009621  Smed_5566  short-chain dehydrogenase/reductase SDR  65.31 
 
 
199 aa  246  4e-64  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0343056 
 
 
-
 
NC_009439  Pmen_1100  short-chain dehydrogenase/reductase SDR  51.15 
 
 
264 aa  243  3e-63  Pseudomonas mendocina ymp  Bacteria  normal  0.576998  normal  0.0165353 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  49.41 
 
 
264 aa  238  5.999999999999999e-62  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_011365  Gdia_0995  short-chain dehydrogenase/reductase SDR  50.57 
 
 
267 aa  237  2e-61  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_3460  short-chain dehydrogenase/reductase SDR  51.54 
 
 
269 aa  235  6e-61  Caulobacter sp. K31  Bacteria  normal  0.590645  normal 
 
 
-
 
NC_008391  Bamb_4735  short-chain dehydrogenase/reductase SDR  50.76 
 
 
262 aa  233  4.0000000000000004e-60  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0308  short-chain dehydrogenase/reductase SDR  48.09 
 
 
266 aa  232  6e-60  Rhodoferax ferrireducens T118  Bacteria  normal  0.130238  n/a   
 
 
-
 
NC_010552  BamMC406_5270  short-chain dehydrogenase/reductase SDR  50 
 
 
262 aa  231  9e-60  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2349  short-chain dehydrogenase/reductase SDR  48.66 
 
 
266 aa  230  1e-59  Polaromonas sp. JS666  Bacteria  normal  0.341044  normal 
 
 
-
 
NC_012792  Vapar_5551  short-chain dehydrogenase/reductase SDR  50.95 
 
 
266 aa  230  2e-59  Variovorax paradoxus S110  Bacteria  normal  0.614615  n/a   
 
 
-
 
NC_009832  Spro_3183  short-chain dehydrogenase/reductase SDR  48.83 
 
 
260 aa  229  2e-59  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2174  short-chain dehydrogenase/reductase SDR  47.27 
 
 
261 aa  226  2e-58  Shewanella baltica OS223  Bacteria  normal  0.30567  hitchhiker  0.00567391 
 
 
-
 
NC_012912  Dd1591_2059  short-chain dehydrogenase/reductase SDR  46.48 
 
 
260 aa  226  4e-58  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0887  short-chain dehydrogenase/reductase SDR  46.21 
 
 
266 aa  222  4e-57  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2278  short-chain dehydrogenase/reductase SDR  47.66 
 
 
260 aa  221  7e-57  Enterobacter sp. 638  Bacteria  normal  normal  0.161761 
 
 
-
 
NC_004578  PSPTO_1864  oxidoreductase, short chain dehydrogenase/reductase family  47.89 
 
 
262 aa  221  9.999999999999999e-57  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2703  short-chain dehydrogenase/reductase SDR  47.13 
 
 
264 aa  220  1.9999999999999999e-56  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2989  short chain dehydrogenase/reductase family oxidoreductase  47.13 
 
 
264 aa  219  3e-56  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0851531 
 
 
-
 
NC_009485  BBta_5145  putative Short-chain dehydrogenase/reductase SDR  47.69 
 
 
267 aa  219  3e-56  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.645114  normal  0.0551529 
 
 
-
 
NC_007005  Psyr_3539  Short-chain dehydrogenase/reductase SDR  46.36 
 
 
262 aa  218  7.999999999999999e-56  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0684522 
 
 
-
 
NC_012912  Dd1591_3491  short-chain dehydrogenase/reductase SDR  46.56 
 
 
287 aa  216  4e-55  Dickeya zeae Ech1591  Bacteria  normal  0.210779  n/a   
 
 
-
 
NC_007492  Pfl01_2478  Short-chain dehydrogenase/reductase SDR  46.74 
 
 
262 aa  208  6e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4444  short-chain dehydrogenase/reductase SDR  57.92 
 
 
264 aa  204  9e-52  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.241971  normal 
 
 
-
 
NC_010338  Caul_0512  short-chain dehydrogenase/reductase SDR  45.59 
 
 
269 aa  204  1e-51  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_2007  short-chain dehydrogenase/reductase SDR  47.89 
 
 
262 aa  199  5e-50  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.511264  normal 
 
 
-
 
NC_013421  Pecwa_2365  short-chain dehydrogenase/reductase SDR  43.97 
 
 
257 aa  194  1e-48  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0958  Short-chain dehydrogenase/reductase SDR  46.01 
 
 
263 aa  189  4e-47  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5779  short-chain dehydrogenase/reductase SDR  46.12 
 
 
268 aa  186  3e-46  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00272439 
 
 
-
 
NC_009664  Krad_2466  short-chain dehydrogenase/reductase SDR  41.99 
 
 
283 aa  169  3e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_05610  short-chain dehydrogenase of unknown substrate specificity  42.69 
 
 
296 aa  159  3e-38  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.100134  normal  0.886117 
 
 
-
 
NC_009380  Strop_0124  short-chain dehydrogenase/reductase SDR  40.81 
 
 
269 aa  155  8e-37  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0129  short-chain dehydrogenase/reductase SDR  39.91 
 
 
269 aa  153  2.9999999999999998e-36  Salinispora arenicola CNS-205  Bacteria  normal  decreased coverage  0.0000288771 
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  44.64 
 
 
258 aa  149  4e-35  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_008699  Noca_1466  short-chain dehydrogenase/reductase SDR  42.13 
 
 
253 aa  149  6e-35  Nocardioides sp. JS614  Bacteria  normal  0.0605466  n/a   
 
 
-
 
NC_013159  Svir_38500  short-chain dehydrogenase of unknown substrate specificity  44.2 
 
 
253 aa  149  6e-35  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2979  short-chain dehydrogenase/reductase SDR  41.48 
 
 
269 aa  147  2.0000000000000003e-34  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6941  short-chain dehydrogenase/reductase SDR  42.67 
 
 
259 aa  146  3e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_2122  short-chain dehydrogenase/reductase SDR  42.24 
 
 
249 aa  145  6e-34  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.617745 
 
 
-
 
NC_012669  Bcav_3647  short-chain dehydrogenase/reductase SDR  41.83 
 
 
255 aa  145  7.0000000000000006e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1833  short-chain dehydrogenase/reductase SDR  41.33 
 
 
252 aa  145  9e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  0.092001  n/a   
 
 
-
 
NC_009077  Mjls_4315  short-chain dehydrogenase/reductase SDR  40.75 
 
 
267 aa  144  2e-33  Mycobacterium sp. JLS  Bacteria  normal  normal  0.294207 
 
 
-
 
NC_008146  Mmcs_4085  short-chain dehydrogenase/reductase SDR  40.75 
 
 
267 aa  144  2e-33  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4161  short-chain dehydrogenase/reductase SDR  40.75 
 
 
267 aa  144  2e-33  Mycobacterium sp. KMS  Bacteria  normal  0.209625  normal 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  39.11 
 
 
266 aa  140  1.9999999999999998e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  42.98 
 
 
266 aa  139  6e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2195  short-chain dehydrogenase/reductase SDR  40 
 
 
250 aa  137  1e-31  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.92313 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  38.67 
 
 
266 aa  137  2e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8408  short-chain dehydrogenase/reductase SDR  40.96 
 
 
254 aa  137  2e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.485174  normal 
 
 
-
 
NC_013947  Snas_6420  short-chain dehydrogenase/reductase SDR  42.11 
 
 
259 aa  137  2e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  37.35 
 
 
271 aa  137  2e-31  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_013131  Caci_6716  short-chain dehydrogenase/reductase SDR  41.06 
 
 
259 aa  137  2e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.543445  normal 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  35.24 
 
 
255 aa  136  4e-31  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2426  short-chain dehydrogenase/reductase SDR  39.3 
 
 
269 aa  135  5e-31  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.316114 
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  38.16 
 
 
258 aa  132  6.999999999999999e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  36.44 
 
 
262 aa  131  9e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_011886  Achl_0516  short-chain dehydrogenase/reductase SDR  40 
 
 
263 aa  131  1.0000000000000001e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009338  Mflv_0244  short-chain dehydrogenase/reductase SDR  37.75 
 
 
258 aa  131  1.0000000000000001e-29  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_35320  short-chain dehydrogenase of unknown substrate specificity  38.86 
 
 
249 aa  131  1.0000000000000001e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.135035  normal  0.316469 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  37.22 
 
 
261 aa  131  1.0000000000000001e-29  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_009077  Mjls_0469  short-chain dehydrogenase/reductase SDR  38.31 
 
 
258 aa  130  2.0000000000000002e-29  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1004  short-chain dehydrogenase/reductase SDR  39.92 
 
 
276 aa  130  2.0000000000000002e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.118299  decreased coverage  0.00158374 
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  36.44 
 
 
262 aa  130  3e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0480  short-chain dehydrogenase/reductase SDR  37.9 
 
 
258 aa  130  3e-29  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0491  short-chain dehydrogenase/reductase SDR  37.9 
 
 
258 aa  130  3e-29  Mycobacterium sp. KMS  Bacteria  normal  normal  0.354983 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  42.27 
 
 
258 aa  128  8.000000000000001e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_0289  short-chain dehydrogenase/reductase SDR  38.94 
 
 
258 aa  128  8.000000000000001e-29  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  37.8 
 
 
257 aa  128  9.000000000000001e-29  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
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