More than 300 homologs were found in PanDaTox collection
for query gene M446_2892 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_2892  methyltransferase type 12  100 
 
 
311 aa  634    Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2893  methyltransferase type 11  62.5 
 
 
317 aa  372  1e-102  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2729  Methyltransferase type 11  59.02 
 
 
317 aa  370  1e-101  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010581  Bind_0448  methyltransferase type 12  54.69 
 
 
307 aa  344  1e-93  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  decreased coverage  0.00834451  normal  0.0296348 
 
 
-
 
NC_010505  Mrad2831_5454  methyltransferase type 11  45.51 
 
 
317 aa  260  2e-68  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.80361 
 
 
-
 
NC_013132  Cpin_5773  Methyltransferase type 12  29.15 
 
 
303 aa  102  6e-21  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.418768  normal 
 
 
-
 
NC_007969  Pcryo_0130  3-demethylubiquinone-9 3-methyltransferase  37.32 
 
 
276 aa  78.2  0.0000000000002  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_0121  3-demethylubiquinone-9 3-methyltransferase  37.32 
 
 
276 aa  76.6  0.0000000000004  Psychrobacter arcticus 273-4  Bacteria  normal  0.83628  normal 
 
 
-
 
NC_010725  Mpop_1471  Methyltransferase type 11  31.94 
 
 
333 aa  68.2  0.0000000002  Methylobacterium populi BJ001  Bacteria  normal  normal  0.133968 
 
 
-
 
NC_011004  Rpal_4588  Methyltransferase type 12  26.21 
 
 
457 aa  66.2  0.0000000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.28526  n/a   
 
 
-
 
NC_007908  Rfer_1243  3-demethylubiquinone-9 3-methyltransferase  27.14 
 
 
329 aa  66.6  0.0000000006  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A0252  2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like  31.88 
 
 
273 aa  63.9  0.000000003  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.859955  n/a   
 
 
-
 
NC_011901  Tgr7_2104  2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase-like protein  30.3 
 
 
304 aa  63.9  0.000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.352054  n/a   
 
 
-
 
NC_011757  Mchl_1749  Methyltransferase type 11  31.02 
 
 
323 aa  63.5  0.000000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.16946 
 
 
-
 
NC_010172  Mext_1471  methyltransferase type 11  31.02 
 
 
323 aa  63.5  0.000000004  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.0736602 
 
 
-
 
NC_013422  Hneap_1347  ubiquinone biosynthesis O-methyltransferase  32.23 
 
 
237 aa  62.4  0.000000009  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02158  3-demethylubiquinone-9 3-methyltransferase  39.39 
 
 
240 aa  61.6  0.00000001  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0630  hypothetical protein  28.77 
 
 
240 aa  62  0.00000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02117  hypothetical protein  39.39 
 
 
240 aa  61.6  0.00000001  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1190  3-demethylubiquinone-9 3-methyltransferase  30.67 
 
 
241 aa  62  0.00000001  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2383  3-demethylubiquinone-9 3-methyltransferase  39.39 
 
 
240 aa  61.6  0.00000001  Escherichia coli SMS-3-5  Bacteria  normal  0.679426  normal 
 
 
-
 
NC_007954  Sden_3104  methyltransferase type 12  27.23 
 
 
396 aa  62  0.00000001  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_2471  ubiquinone biosynthesis O-methyltransferase  33.91 
 
 
253 aa  61.6  0.00000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1419  3-demethylubiquinone-9 3-methyltransferase  39.39 
 
 
240 aa  61.6  0.00000001  Escherichia coli ATCC 8739  Bacteria  normal  hitchhiker  0.000287901 
 
 
-
 
NC_011353  ECH74115_3366  3-demethylubiquinone-9 3-methyltransferase  39.39 
 
 
240 aa  62  0.00000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.923438  normal 
 
 
-
 
CP001637  EcDH1_1427  ubiquinone biosynthesis O-methyltransferase  39.39 
 
 
240 aa  61.6  0.00000002  Escherichia coli DH1  Bacteria  hitchhiker  0.0000505917  n/a   
 
 
-
 
NC_010658  SbBS512_E2607  3-demethylubiquinone-9 3-methyltransferase  39 
 
 
240 aa  61.6  0.00000002  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2372  3-demethylubiquinone-9 3-methyltransferase  39.39 
 
 
240 aa  61.6  0.00000002  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3020  ubiquinone biosynthesis O-methyltransferase  40.59 
 
 
249 aa  61.2  0.00000002  Dickeya zeae Ech1591  Bacteria  normal  0.615191  n/a   
 
 
-
 
NC_009801  EcE24377A_2527  3-demethylubiquinone-9 3-methyltransferase  39.39 
 
 
240 aa  61.6  0.00000002  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1038  ubiquinone biosynthesis O-methyltransferase  39.6 
 
 
244 aa  60.5  0.00000003  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1507  ubiquinone biosynthesis O-methyltransferase  40.59 
 
 
247 aa  60.5  0.00000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.148991  normal  0.0208491 
 
 
-
 
NC_012917  PC1_1104  3-demethylubiquinone-9 3-methyltransferase  39.22 
 
 
239 aa  60.5  0.00000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.580904  n/a   
 
 
-
 
NC_011071  Smal_2740  3-demethylubiquinone-9 3-methyltransferase  35.78 
 
 
238 aa  60.1  0.00000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2495  3-demethylubiquinone-9 3-methyltransferase  31.43 
 
 
238 aa  59.7  0.00000006  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2503  3-demethylubiquinone-9 3-methyltransferase  38.38 
 
 
242 aa  59.3  0.00000007  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2412  3-demethylubiquinone-9 3-methyltransferase  38.38 
 
 
242 aa  59.3  0.00000007  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.114708  n/a   
 
 
-
 
NC_011205  SeD_A2620  3-demethylubiquinone-9 3-methyltransferase  38.38 
 
 
242 aa  59.3  0.00000007  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0890164  normal  0.121795 
 
 
-
 
NC_011080  SNSL254_A2461  3-demethylubiquinone-9 3-methyltransferase  38.38 
 
 
242 aa  59.3  0.00000007  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.88889  normal  0.0528077 
 
 
-
 
NC_011083  SeHA_C2516  3-demethylubiquinone-9 3-methyltransferase  38.38 
 
 
242 aa  59.3  0.00000007  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.158942  normal  0.172126 
 
 
-
 
NC_013739  Cwoe_5499  Methyltransferase type 11  40 
 
 
196 aa  59.3  0.00000009  Conexibacter woesei DSM 14684  Bacteria  normal  0.456016  normal 
 
 
-
 
NC_013421  Pecwa_3212  3-demethylubiquinone-9 3-methyltransferase  39.22 
 
 
239 aa  58.9  0.0000001  Pectobacterium wasabiae WPP163  Bacteria  normal  0.812098  n/a   
 
 
-
 
NC_007484  Noc_2296  3-demethylubiquinone-9 3-methyltransferase  36.89 
 
 
236 aa  58.9  0.0000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_23220  3-demethylubiquinone-9 3-methyltransferase  36.19 
 
 
232 aa  58.5  0.0000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0574161  hitchhiker  0.00443225 
 
 
-
 
NC_010159  YpAngola_A1311  3-demethylubiquinone-9 3-methyltransferase  36.73 
 
 
242 aa  57.8  0.0000002  Yersinia pestis Angola  Bacteria  normal  0.310574  normal 
 
 
-
 
NC_004347  SO_3266  hypothetical protein  29.09 
 
 
400 aa  58.5  0.0000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2071  3-demethylubiquinone-9 3-methyltransferase  36.27 
 
 
236 aa  57.8  0.0000002  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.0000425101  n/a   
 
 
-
 
NC_009708  YpsIP31758_2768  3-demethylubiquinone-9 3-methyltransferase  36.73 
 
 
242 aa  57.8  0.0000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.167435  n/a   
 
 
-
 
NC_010465  YPK_2847  3-demethylubiquinone-9 3-methyltransferase  36.73 
 
 
242 aa  57.8  0.0000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.170371  n/a   
 
 
-
 
NC_009439  Pmen_1845  3-demethylubiquinone-9 3-methyltransferase  36.89 
 
 
234 aa  57.8  0.0000002  Pseudomonas mendocina ymp  Bacteria  decreased coverage  0.00431464  normal  0.756459 
 
 
-
 
NC_009436  Ent638_2800  3-demethylubiquinone-9 3-methyltransferase  38 
 
 
242 aa  57.8  0.0000002  Enterobacter sp. 638  Bacteria  normal  normal  0.241472 
 
 
-
 
NC_008817  P9515_14071  hypothetical protein  21.89 
 
 
354 aa  57.8  0.0000002  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.0536684  n/a   
 
 
-
 
NC_009092  Shew_1948  3-demethylubiquinone-9 3-methyltransferase  37.62 
 
 
262 aa  57.4  0.0000003  Shewanella loihica PV-4  Bacteria  normal  0.767246  normal  0.0132888 
 
 
-
 
NC_009901  Spea_2066  3-demethylubiquinone-9 3-methyltransferase  37.62 
 
 
236 aa  57.4  0.0000003  Shewanella pealeana ATCC 700345  Bacteria  normal  0.10278  n/a   
 
 
-
 
NC_013456  VEA_003110  3-demethylubiquinone-9 3-methyltransferase  34.21 
 
 
242 aa  56.6  0.0000005  Vibrio sp. Ex25  Bacteria  normal  0.35235  n/a   
 
 
-
 
NC_009997  Sbal195_2405  3-demethylubiquinone-9 3-methyltransferase  35.64 
 
 
236 aa  56.2  0.0000006  Shewanella baltica OS195  Bacteria  hitchhiker  0.0031453  unclonable  0.0000107222 
 
 
-
 
NC_009656  PSPA7_1958  3-demethylubiquinone-9 3-methyltransferase  37.14 
 
 
232 aa  56.2  0.0000006  Pseudomonas aeruginosa PA7  Bacteria  normal  0.937117  n/a   
 
 
-
 
NC_007947  Mfla_1576  3-demethylubiquinone-9 3-methyltransferase  29.63 
 
 
229 aa  56.2  0.0000006  Methylobacillus flagellatus KT  Bacteria  normal  0.0819441  unclonable  0.000000165496 
 
 
-
 
NC_011663  Sbal223_2057  3-demethylubiquinone-9 3-methyltransferase  35.64 
 
 
236 aa  56.2  0.0000006  Shewanella baltica OS223  Bacteria  hitchhiker  0.00373445  unclonable  0.00000000000181282 
 
 
-
 
NC_009665  Shew185_2288  3-demethylubiquinone-9 3-methyltransferase  35.64 
 
 
236 aa  56.2  0.0000006  Shewanella baltica OS185  Bacteria  hitchhiker  0.0000000434685  n/a   
 
 
-
 
NC_009052  Sbal_2061  3-demethylubiquinone-9 3-methyltransferase  35.64 
 
 
236 aa  56.2  0.0000006  Shewanella baltica OS155  Bacteria  hitchhiker  0.000216259  n/a   
 
 
-
 
NC_010717  PXO_00379  3-demethylubiquinone-9 3-methyltransferase  28.12 
 
 
239 aa  55.8  0.0000008  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.296609  n/a   
 
 
-
 
NC_007005  Psyr_3650  3-demethylubiquinone-9 3-methyltransferase  32.31 
 
 
232 aa  55.8  0.0000008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1227  3-demethylubiquinone-9 3-methyltransferase  34.29 
 
 
232 aa  55.8  0.0000009  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000000000143556  normal  0.238391 
 
 
-
 
NC_013730  Slin_4934  Methyltransferase type 11  20.71 
 
 
332 aa  55.1  0.000001  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.310878 
 
 
-
 
NC_011146  Gbem_1111  Methyltransferase type 12  28.89 
 
 
310 aa  55.5  0.000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.100428  n/a   
 
 
-
 
NC_007404  Tbd_0946  3-demethylubiquinone-9 3-methyltransferase  35.71 
 
 
232 aa  54.3  0.000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2861  ubiquinone biosynthesis O-methyltransferase  33.33 
 
 
240 aa  54.3  0.000002  Marinomonas sp. MWYL1  Bacteria  normal  0.0308666  decreased coverage  0.000000000135895 
 
 
-
 
NC_013730  Slin_5520  Methyltransferase type 12  24.83 
 
 
306 aa  55.1  0.000002  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.281271 
 
 
-
 
NC_009253  Dred_0962  methyltransferase type 11  28.4 
 
 
242 aa  55.1  0.000002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1055  glycosyl transferase family 2  26.25 
 
 
1162 aa  54.7  0.000002  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.289988  n/a   
 
 
-
 
NC_009783  VIBHAR_02731  3-demethylubiquinone-9 3-methyltransferase  33.33 
 
 
235 aa  54.7  0.000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_002947  PP_1765  3-demethylubiquinone-9 3-methyltransferase  33.98 
 
 
232 aa  53.9  0.000003  Pseudomonas putida KT2440  Bacteria  normal  0.293992  normal 
 
 
-
 
NC_009485  BBta_3910  hypothetical protein  28.19 
 
 
305 aa  53.9  0.000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.230808  normal  0.860748 
 
 
-
 
NC_009972  Haur_3360  methyltransferase type 11  25.5 
 
 
239 aa  53.9  0.000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.00148937  n/a   
 
 
-
 
NC_007492  Pfl01_4081  3-demethylubiquinone-9 3-methyltransferase  33.98 
 
 
232 aa  53.9  0.000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.576596  normal  0.236104 
 
 
-
 
NC_007954  Sden_1949  3-demethylubiquinone-9 3-methyltransferase  35 
 
 
242 aa  54.3  0.000003  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00359705  n/a   
 
 
-
 
NC_009512  Pput_3949  3-demethylubiquinone-9 3-methyltransferase  33.98 
 
 
232 aa  53.9  0.000003  Pseudomonas putida F1  Bacteria  hitchhiker  0.00452266  normal  0.0302909 
 
 
-
 
NC_013757  Gobs_0317  Methyltransferase type 12  35.14 
 
 
241 aa  54.3  0.000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1356  3-demethylubiquinone-9 3-methyltransferase  33.64 
 
 
232 aa  54.3  0.000003  Pseudomonas putida GB-1  Bacteria  normal  0.818542  normal  0.836315 
 
 
-
 
NC_013037  Dfer_3803  Methyltransferase type 12  26.22 
 
 
300 aa  53.9  0.000003  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.157905  normal  0.599602 
 
 
-
 
NC_002939  GSU3022  hypothetical protein  25.33 
 
 
1124 aa  53.9  0.000004  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_1742  3-demethylubiquinone-9 3-methyltransferase  31.54 
 
 
239 aa  53.9  0.000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1920  methyltransferase type 11  32.37 
 
 
176 aa  53.5  0.000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.657915 
 
 
-
 
NC_009457  VC0395_A0876  3-demethylubiquinone-9 3-methyltransferase  32.46 
 
 
245 aa  53.9  0.000004  Vibrio cholerae O395  Bacteria  hitchhiker  0.000138589  n/a   
 
 
-
 
NC_010676  Bphyt_6705  Methyltransferase type 11  29.06 
 
 
810 aa  53.5  0.000004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2060  3-demethylubiquinone-9 3-methyltransferase  34.34 
 
 
236 aa  53.5  0.000004  Shewanella sp. MR-7  Bacteria  hitchhiker  0.000109149  unclonable  0.0000217963 
 
 
-
 
NC_011312  VSAL_I1768  3-demethylubiquinone-9 3-methyltransferase  30.43 
 
 
241 aa  53.5  0.000004  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.69336  n/a   
 
 
-
 
NC_011662  Tmz1t_1719  3-demethylubiquinone-9 3-methyltransferase  35.24 
 
 
234 aa  53.5  0.000004  Thauera sp. MZ1T  Bacteria  normal  0.815395  n/a   
 
 
-
 
NC_009524  PsycPRwf_2117  3-demethylubiquinone-9 3-methyltransferase  33.98 
 
 
262 aa  53.5  0.000005  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1372  3-demethylubiquinone-9 3-methyltransferase  33.01 
 
 
232 aa  53.1  0.000005  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009634  Mevan_0406  methyltransferase type 11  22.52 
 
 
244 aa  53.1  0.000005  Methanococcus vannielii SB  Archaea  normal  0.109982  n/a   
 
 
-
 
NC_009523  RoseRS_4412  methyltransferase type 11  24.87 
 
 
303 aa  53.5  0.000005  Roseiflexus sp. RS-1  Bacteria  normal  0.033739  normal  0.97195 
 
 
-
 
NC_013132  Cpin_6261  Methyltransferase type 12  30.53 
 
 
298 aa  53.1  0.000006  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.265147 
 
 
-
 
NC_009484  Acry_1350  methyltransferase type 12  27.08 
 
 
1046 aa  52.8  0.000008  Acidiphilium cryptum JF-5  Bacteria  normal  0.041094  n/a   
 
 
-
 
NC_009719  Plav_1325  methyltransferase type 12  30.92 
 
 
240 aa  52.8  0.000008  Parvibaculum lavamentivorans DS-1  Bacteria  normal  hitchhiker  0.000000000858625 
 
 
-
 
NC_008577  Shewana3_1971  3-demethylubiquinone-9 3-methyltransferase  34.34 
 
 
236 aa  52.8  0.000009  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000321939  hitchhiker  0.00000717465 
 
 
-
 
NC_009052  Sbal_2962  methyltransferase type 11  25 
 
 
401 aa  52.4  0.000009  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2413  3-demethylubiquinone-9 3-methyltransferase  35.35 
 
 
236 aa  52.4  0.00001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013162  Coch_0835  Methyltransferase type 12  23.03 
 
 
273 aa  52.4  0.00001  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
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