6 homologs were found in PanDaTox collection
for query gene M446_1777 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_1777    100 
 
 
162 bp  321  3e-86  Methylobacterium sp. 4-46  Bacteria  normal  0.132474  decreased coverage  0.00428994 
 
 
-
 
NC_010172  Mext_0366  CsbD family protein  89.74 
 
 
204 bp  46.1  0.003  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4456  CsbD family protein  93.55 
 
 
204 bp  46.1  0.003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.966914 
 
 
-
 
NC_010505  Mrad2831_5653  CsbD family protein  93.55 
 
 
204 bp  46.1  0.003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.52436  normal 
 
 
-
 
NC_010511  M446_5381  CsbD family protein  93.55 
 
 
204 bp  46.1  0.003  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0480327 
 
 
-
 
NC_011757  Mchl_0397  CsbD family protein  89.74 
 
 
204 bp  46.1  0.003  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
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