More than 300 homologs were found in PanDaTox collection
for query gene M446_1399 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_1399  two component transcriptional regulator  100 
 
 
228 aa  461  1e-129  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.11718 
 
 
-
 
NC_011894  Mnod_1017  two component transcriptional regulator, winged helix family  94.74 
 
 
228 aa  443  1.0000000000000001e-124  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_4105  two component transcriptional regulator  83.33 
 
 
228 aa  386  1e-106  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.400488 
 
 
-
 
NC_010725  Mpop_1663  two component transcriptional regulator, winged helix family  80.26 
 
 
228 aa  378  1e-104  Methylobacterium populi BJ001  Bacteria  normal  normal  0.489331 
 
 
-
 
NC_010172  Mext_1576  response regulator receiver  79.82 
 
 
235 aa  374  1e-103  Methylobacterium extorquens PA1  Bacteria  normal  0.630975  normal  0.0547836 
 
 
-
 
NC_011757  Mchl_1855  two component transcriptional regulator, winged helix family  79.82 
 
 
228 aa  374  1e-103  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.848692 
 
 
-
 
NC_010581  Bind_0229  two component transcriptional regulator  69.74 
 
 
228 aa  337  9.999999999999999e-92  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.444604  normal  0.247928 
 
 
-
 
NC_011666  Msil_0332  two component transcriptional regulator, winged helix family  67.11 
 
 
228 aa  332  4e-90  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0145192 
 
 
-
 
NC_009720  Xaut_1771  two component transcriptional regulator  65.79 
 
 
228 aa  326  2.0000000000000001e-88  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.046286 
 
 
-
 
NC_007406  Nwi_0087  transcriptional regulatory protein  66.38 
 
 
228 aa  318  3e-86  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.701272  normal  0.0818275 
 
 
-
 
NC_004310  BR2006  DNA-binding response regulator  64.41 
 
 
227 aa  317  1e-85  Brucella suis 1330  Bacteria  normal  0.347503  n/a   
 
 
-
 
NC_009667  Oant_0965  two component transcriptional regulator  64.41 
 
 
227 aa  317  1e-85  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_1929  DNA-binding response regulator  64.41 
 
 
227 aa  317  1e-85  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0381  two component transcriptional regulator  64.04 
 
 
228 aa  315  3e-85  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.638697  normal 
 
 
-
 
NC_007925  RPC_0280  two component transcriptional regulator  64.47 
 
 
228 aa  315  3e-85  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.123527 
 
 
-
 
NC_007958  RPD_0440  winged helix family two component transcriptional regulator  64.04 
 
 
228 aa  315  4e-85  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.79352 
 
 
-
 
NC_011004  Rpal_0286  two component transcriptional regulator, winged helix family  64.04 
 
 
228 aa  313  1.9999999999999998e-84  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1289  two component transcriptional regulator  63.16 
 
 
240 aa  310  1e-83  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.101499  normal  0.741023 
 
 
-
 
NC_011989  Avi_4227  two component response regulator  64 
 
 
227 aa  301  4.0000000000000003e-81  Agrobacterium vitis S4  Bacteria  normal  0.0109817  n/a   
 
 
-
 
NC_008254  Meso_3424  two component transcriptional regulator  64.86 
 
 
227 aa  302  4.0000000000000003e-81  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_3056  two component transcriptional regulator  64.86 
 
 
253 aa  301  6.000000000000001e-81  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0051  two component transcriptional regulator  62.56 
 
 
228 aa  300  1e-80  Ruegeria sp. TM1040  Bacteria  normal  normal  0.480932 
 
 
-
 
NC_011369  Rleg2_3763  two component transcriptional regulator, winged helix family  63.27 
 
 
227 aa  299  2e-80  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0417  two component transcriptional regulator  62.56 
 
 
228 aa  298  5e-80  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0177  two component transcriptional regulator  64.91 
 
 
228 aa  297  1e-79  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_4088  two component transcriptional regulator, winged helix family  62.39 
 
 
227 aa  295  3e-79  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2950  two component transcriptional regulator  61.5 
 
 
256 aa  294  9e-79  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_5036  two component transcriptional regulator  68.08 
 
 
232 aa  292  3e-78  Caulobacter sp. K31  Bacteria  normal  normal  0.367828 
 
 
-
 
NC_009952  Dshi_0038  two component transcriptional regulator  61.67 
 
 
228 aa  292  4e-78  Dinoroseobacter shibae DFL 12  Bacteria  normal  hitchhiker  0.000503825 
 
 
-
 
NC_009428  Rsph17025_3128  two component transcriptional regulator  62.11 
 
 
228 aa  290  9e-78  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.780725  hitchhiker  0.000183133 
 
 
-
 
NC_007493  RSP_0847  two component transcriptional regulator  61.67 
 
 
228 aa  289  2e-77  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.140263  n/a   
 
 
-
 
NC_007964  Nham_0094  two component transcriptional regulator  63.16 
 
 
228 aa  290  2e-77  Nitrobacter hamburgensis X14  Bacteria  normal  0.402679  n/a   
 
 
-
 
NC_009049  Rsph17029_2505  two component transcriptional regulator  61.67 
 
 
228 aa  289  2e-77  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.472327  normal  0.764107 
 
 
-
 
NC_008686  Pden_2374  two component transcriptional regulator  59.91 
 
 
228 aa  288  5.0000000000000004e-77  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.851486 
 
 
-
 
NC_008783  BARBAKC583_0059  DNA-binding response regulator  52.02 
 
 
228 aa  271  8.000000000000001e-72  Bartonella bacilliformis KC583  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_2814  two component transcriptional regulator  57.64 
 
 
240 aa  270  2e-71  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_0044  two component transcriptional regulator, winged helix family  58.44 
 
 
238 aa  268  5e-71  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.164674  normal  0.0215513 
 
 
-
 
NC_007643  Rru_A3638  two component transcriptional regulator  43.48 
 
 
270 aa  154  1e-36  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  40.43 
 
 
236 aa  149  2e-35  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_21090  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  41.95 
 
 
231 aa  149  3e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  0.664911  n/a   
 
 
-
 
NC_009972  Haur_4156  two component transcriptional regulator  39.57 
 
 
232 aa  149  5e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.0000307056  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  38.6 
 
 
235 aa  148  6e-35  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  38.6 
 
 
235 aa  148  6e-35  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  38.6 
 
 
235 aa  148  6e-35  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  38.6 
 
 
235 aa  148  6e-35  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  38.6 
 
 
235 aa  148  6e-35  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  38.6 
 
 
235 aa  148  6e-35  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  38.6 
 
 
235 aa  148  6e-35  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  38.6 
 
 
235 aa  148  6e-35  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  38.6 
 
 
235 aa  148  6e-35  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  38.6 
 
 
235 aa  148  8e-35  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  39.83 
 
 
237 aa  147  9e-35  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013174  Jden_1871  two component transcriptional regulator, winged helix family  40.54 
 
 
226 aa  147  1.0000000000000001e-34  Jonesia denitrificans DSM 20603  Bacteria  normal  0.105791  normal  0.266081 
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  38.1 
 
 
235 aa  146  2.0000000000000003e-34  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2389  two component transcriptional regulator, winged helix family  40.89 
 
 
240 aa  146  2.0000000000000003e-34  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0687652  decreased coverage  0.0000973314 
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  37.5 
 
 
230 aa  146  3e-34  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0967  response regulator receiver  40.87 
 
 
229 aa  146  3e-34  Salinispora tropica CNB-440  Bacteria  normal  0.359698  normal  0.873584 
 
 
-
 
NC_013093  Amir_6310  two component transcriptional regulator, winged helix family  40.97 
 
 
261 aa  145  4.0000000000000006e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  0.534044  n/a   
 
 
-
 
NC_012669  Bcav_1155  two component transcriptional regulator, winged helix family  39.13 
 
 
230 aa  145  6e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.560017  normal 
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  38.16 
 
 
235 aa  145  7.0000000000000006e-34  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  38.7 
 
 
229 aa  144  1e-33  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_008148  Rxyl_3017  two component transcriptional regulator  38.94 
 
 
225 aa  144  1e-33  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_4445  two component transcriptional regulator  38.6 
 
 
229 aa  144  1e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.14031 
 
 
-
 
NC_009953  Sare_0904  two component transcriptional regulator  40.71 
 
 
229 aa  143  2e-33  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0335314 
 
 
-
 
NC_007333  Tfu_0343  response regulator receiver  36.91 
 
 
232 aa  142  3e-33  Thermobifida fusca YX  Bacteria  normal  0.86362  n/a   
 
 
-
 
NC_009523  RoseRS_0761  two component transcriptional regulator  38.16 
 
 
229 aa  142  4e-33  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.179681 
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  39.21 
 
 
242 aa  142  5e-33  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_008578  Acel_1595  two component transcriptional regulator  39.64 
 
 
227 aa  141  9e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  0.526383  normal  0.570373 
 
 
-
 
NC_010159  YpAngola_A2763  DNA-binding response regulator  35.24 
 
 
235 aa  141  9.999999999999999e-33  Yersinia pestis Angola  Bacteria  normal  0.0137809  hitchhiker  0.000236663 
 
 
-
 
NC_010465  YPK_1414  two component transcriptional regulator  34.8 
 
 
235 aa  140  9.999999999999999e-33  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1304  DNA-binding response regulator  35.24 
 
 
235 aa  141  9.999999999999999e-33  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.18531  n/a   
 
 
-
 
NC_013595  Sros_1333  response regulator receiver protein  39.82 
 
 
222 aa  140  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.40527  normal  0.1595 
 
 
-
 
NC_013521  Sked_08510  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.29 
 
 
227 aa  140  1.9999999999999998e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.103906  normal  0.575645 
 
 
-
 
NC_014165  Tbis_0707  winged helix family two component transcriptional regulator  39.37 
 
 
222 aa  140  1.9999999999999998e-32  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4029  two component transcriptional regulator  38.26 
 
 
241 aa  140  1.9999999999999998e-32  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.871415 
 
 
-
 
NC_014210  Ndas_3846  two component transcriptional regulator, winged helix family  39.37 
 
 
222 aa  140  1.9999999999999998e-32  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_43340  two-component response regulator KdpE  39.38 
 
 
230 aa  140  1.9999999999999998e-32  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.807414  normal 
 
 
-
 
NC_013510  Tcur_4122  two component transcriptional regulator, winged helix family  40.27 
 
 
223 aa  140  1.9999999999999998e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2051  response regulator receiver:transcriptional regulatory protein, C-terminal  37.83 
 
 
230 aa  139  3e-32  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.191031  normal  0.53595 
 
 
-
 
NC_007333  Tfu_2549  response regulator receiver  38.46 
 
 
222 aa  139  3e-32  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  41.33 
 
 
229 aa  139  3e-32  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0758  two component transcriptional regulator  39.66 
 
 
244 aa  139  3e-32  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.885545  normal 
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  37.18 
 
 
237 aa  139  3e-32  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0064  DNA-binding response regulator  37.89 
 
 
235 aa  139  3e-32  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.611294  normal 
 
 
-
 
NC_013522  Taci_0717  two component transcriptional regulator, winged helix family  36.49 
 
 
226 aa  139  3e-32  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.000154116  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  38.16 
 
 
234 aa  139  3e-32  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_008819  NATL1_11471  two-component response regulator, phosphate  34.31 
 
 
245 aa  139  3e-32  Prochlorococcus marinus str. NATL1A  Bacteria  normal  normal  0.0202491 
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  41.67 
 
 
231 aa  139  3e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_007335  PMN2A_0436  two component transcriptional regulator  34.58 
 
 
245 aa  139  3.9999999999999997e-32  Prochlorococcus marinus str. NATL2A  Bacteria  normal  0.18923  n/a   
 
 
-
 
NC_014158  Tpau_3286  two component transcriptional regulator, winged helix family  37.78 
 
 
228 aa  139  3.9999999999999997e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.167791  n/a   
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  39.57 
 
 
239 aa  139  3.9999999999999997e-32  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_0367  response regulator receiver  34.35 
 
 
233 aa  139  3.9999999999999997e-32  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2599  two component transcriptional regulator, winged helix family  38.39 
 
 
227 aa  139  4.999999999999999e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  37.87 
 
 
235 aa  138  6e-32  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_008699  Noca_1613  response regulator receiver  34.23 
 
 
225 aa  138  6e-32  Nocardioides sp. JS614  Bacteria  normal  0.97266  n/a   
 
 
-
 
NC_013174  Jden_2083  two component transcriptional regulator, winged helix family  40.17 
 
 
237 aa  138  7e-32  Jonesia denitrificans DSM 20603  Bacteria  normal  0.873655  normal 
 
 
-
 
NC_007516  Syncc9605_1618  two component transcriptional regulator  36.75 
 
 
254 aa  138  7e-32  Synechococcus sp. CC9605  Bacteria  normal  normal  0.218753 
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  40.97 
 
 
229 aa  138  7e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_4064  two component transcriptional regulator  39.47 
 
 
233 aa  138  7.999999999999999e-32  Salinispora arenicola CNS-205  Bacteria  normal  0.98903  normal  0.0666639 
 
 
-
 
NC_007333  Tfu_2496  response regulator receiver  41.52 
 
 
225 aa  137  1e-31  Thermobifida fusca YX  Bacteria  normal  0.491467  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>