15 homologs were found in PanDaTox collection
for query gene M446_1273 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010511  M446_1273  XRE family transcriptional regulator  100 
 
 		 103 aa  209  1e-53  Methylobacterium sp. 4-46  Bacteria  normal  0.31863  normal  0.4589 
 
 
-
 
NC_011887  Mnod_8001  transcriptional regulator, XRE family  87 
 
 		 118 aa  181  2.0000000000000003e-45  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010510  Mrad2831_5908  XRE family transcriptional regulator  85.44 
 
 		 108 aa  179  1e-44  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.209414  hitchhiker  0.00928486 
 
 
-
 
NC_010725  Mpop_0269  transcriptional regulator, XRE family  83.51 
 
 		 98 aa  167  4e-41  Methylobacterium populi BJ001  Bacteria  normal  0.75294  normal  1 
 
 
-
 
NC_010172  Mext_1160  helix-turn-helix domain-containing protein  81.44 
 
 		 98 aa  166  8e-41  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.476577 
 
 
-
 
NC_011757  Mchl_1320  transcriptional regulator, XRE family  81.44 
 
 		 98 aa  166  8e-41  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007641  Rru_B0041  XRE family transcriptional regulator  57.73 
 
 		 103 aa  126  1.0000000000000001e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0601255  n/a   
 
 
-
 
NC_008042  TM1040_3842  XRE family transcriptional regulator  53.41 
 
 		 100 aa  104  5e-22  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.039108 
 
 
-
 
NC_012791  Vapar_2697  transcriptional regulator, XRE family  33.7 
 
 		 126 aa  63.2  0.000000001  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_013165  Shel_06770  predicted transcriptional regulator  37.14 
 
 		 106 aa  50.8  0.000006  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009050  Rsph17029_3349  XRE family transcriptional regulator  38.57 
 
 		 115 aa  46.2  0.0002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.185008 
 
 
-
 
NC_012034  Athe_2484  transcriptional regulator, XRE family  39.34 
 
 		 67 aa  45.4  0.0003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_0875  XRE family transcriptional regulator  38.98 
 
 		 77 aa  43.5  0.001  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000023095  n/a   
 
 
-
 
NC_012918  GM21_0802  transcriptional regulator, XRE family  44.07 
 
 		 106 aa  42.7  0.002  Geobacter sp. M21  Bacteria  n/a    normal  0.237035 
 
 
-
 
NC_013206  Aaci_2954  transcriptional regulator, XRE family  43.64 
 
 		 223 aa  40.4  0.009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  unclonable  0.00000000000401895  n/a   
 
 
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