More than 300 homologs were found in PanDaTox collection
for query gene M446_0017 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_0017  binding-protein-dependent transport systems inner membrane component  100 
 
 
383 aa  640    Methylobacterium sp. 4-46  Bacteria  normal  0.387266  normal  0.0728154 
 
 
-
 
NC_011894  Mnod_0020  binding-protein-dependent transport systems inner membrane component  74.91 
 
 
379 aa  307  2.0000000000000002e-82  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.164397  n/a   
 
 
-
 
NC_011757  Mchl_0442  binding-protein-dependent transport systems inner membrane component  53.91 
 
 
380 aa  216  4e-55  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.728913 
 
 
-
 
NC_010172  Mext_0409  binding-protein-dependent transport systems inner membrane component  53.2 
 
 
380 aa  186  5e-46  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.541463 
 
 
-
 
NC_010725  Mpop_0477  binding-protein-dependent transport systems inner membrane component  52 
 
 
380 aa  174  1.9999999999999998e-42  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2944  binding-protein-dependent transport systems inner membrane component  38.42 
 
 
400 aa  164  2.0000000000000002e-39  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.543286  n/a   
 
 
-
 
NC_009436  Ent638_2729  binding-protein-dependent transport systems inner membrane component  37.18 
 
 
385 aa  159  7e-38  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_0914  quaternary amine ABC transporter permease  35.45 
 
 
385 aa  148  2.0000000000000003e-34  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.664933 
 
 
-
 
NC_011353  ECH74115_3255  ABC transporter, quaternary amine uptake (QAT) family, permease protein  35.61 
 
 
385 aa  148  2.0000000000000003e-34  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000687244 
 
 
-
 
CP001637  EcDH1_1527  binding-protein-dependent transport systems inner membrane component  36 
 
 
385 aa  147  3e-34  Escherichia coli DH1  Bacteria  normal  0.782089  n/a   
 
 
-
 
NC_009801  EcE24377A_2419  quaternary amine ABC transporter permease  36 
 
 
385 aa  147  4.0000000000000006e-34  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1517  binding-protein-dependent transport systems inner membrane component  35.61 
 
 
385 aa  146  5e-34  Escherichia coli ATCC 8739  Bacteria  normal  0.89368  normal 
 
 
-
 
NC_010658  SbBS512_E0843  ABC transporter, quaternary amine uptake (QAT) family, permease protein  35.61 
 
 
385 aa  146  8.000000000000001e-34  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02060  predicted transporter subunit: membrane component of ABC superfamily  35.71 
 
 
385 aa  145  1e-33  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_02018  hypothetical protein  35.71 
 
 
385 aa  145  1e-33  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1446  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
386 aa  145  1e-33  Serratia proteamaculans 568  Bacteria  normal  0.706116  normal 
 
 
-
 
NC_009800  EcHS_A2265  quaternary amine ABC transporter permease  35.71 
 
 
385 aa  145  1e-33  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2785  quaternary amine ABC transporter permease  35.79 
 
 
384 aa  144  2e-33  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A2353  inner membrane ABC transporter permease protein YehY  35.98 
 
 
377 aa  144  2e-33  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_2864  binding-protein-dependent transport systems inner membrane component  35.79 
 
 
384 aa  144  3e-33  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1330  quaternary amine ABC transporter permease  35.79 
 
 
384 aa  144  3e-33  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2402  inner membrane ABC transporter permease YehY  35.69 
 
 
389 aa  142  7e-33  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.120526  normal 
 
 
-
 
NC_011083  SeHA_C2398  inner membrane ABC transporter permease YehY  35.2 
 
 
389 aa  142  7e-33  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.0918369  normal 
 
 
-
 
NC_011149  SeAg_B2309  inner membrane ABC transporter permease protein YehY  35.2 
 
 
389 aa  142  7e-33  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A2510  inner membrane ABC transporter permease YehY  35.2 
 
 
389 aa  141  1.9999999999999998e-32  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.579969  normal 
 
 
-
 
NC_007948  Bpro_3625  binding-protein-dependent transport systems inner membrane component  34.15 
 
 
383 aa  135  9.999999999999999e-31  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_0215  ABC transporter, permease protein  38.07 
 
 
386 aa  129  1.0000000000000001e-28  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3116  binding-protein-dependent transport systems inner membrane component  38.66 
 
 
386 aa  125  1e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.255737  normal  0.184404 
 
 
-
 
NC_007908  Rfer_1855  binding-protein-dependent transport systems inner membrane component  36.95 
 
 
392 aa  124  3e-27  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3512  binding-protein-dependent transport systems inner membrane component  36.99 
 
 
392 aa  123  6e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0498  ABC proline/glycine betaine transporter, inner membrane subunit  37.75 
 
 
392 aa  122  8e-27  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR0224  ABC transporter, permease protein  38.07 
 
 
386 aa  122  9.999999999999999e-27  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2138  binding-protein-dependent transport systems inner membrane component  40.48 
 
 
389 aa  118  9.999999999999999e-26  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010515  Bcenmc03_5140  binding-protein-dependent transport systems inner membrane component  37.46 
 
 
392 aa  117  3e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.733868  normal 
 
 
-
 
NC_008061  Bcen_3225  binding-protein-dependent transport systems inner membrane component  37.18 
 
 
392 aa  115  1.0000000000000001e-24  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5142  binding-protein-dependent transport systems inner membrane component  37.18 
 
 
392 aa  115  1.0000000000000001e-24  Burkholderia cenocepacia HI2424  Bacteria  normal  0.28982  normal 
 
 
-
 
NC_004116  SAG0243  amino acid ABC transporter, permease protein  34 
 
 
211 aa  114  4.0000000000000004e-24  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1202  binding-protein-dependent transport systems inner membrane component  32.52 
 
 
212 aa  113  7.000000000000001e-24  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2379  ABC transporter, permease protein  36.8 
 
 
406 aa  106  6e-22  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP2357  amino acid ABC transporter, permease protein  30.14 
 
 
211 aa  105  2e-21  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1975  amine ABC transporter, permease protein  36.8 
 
 
406 aa  105  2e-21  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4638  binding-protein-dependent transport systems inner membrane component  36.64 
 
 
399 aa  103  5e-21  Sinorhizobium medicae WSM419  Bacteria  normal  0.508179  normal  0.272859 
 
 
-
 
NC_009076  BURPS1106A_1994  amine ABC transporter, permease protein  36.52 
 
 
406 aa  103  6e-21  Burkholderia pseudomallei 1106a  Bacteria  normal  0.455758  n/a   
 
 
-
 
NC_010552  BamMC406_5060  binding-protein-dependent transport systems inner membrane component  36.75 
 
 
392 aa  103  6e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009080  BMA10247_0921  amine ABC transporter, permease protein  36.52 
 
 
406 aa  102  2e-20  Burkholderia mallei NCTC 10247  Bacteria  normal  0.73664  n/a   
 
 
-
 
NC_009667  Oant_0298  binding-protein-dependent transport systems inner membrane component  35.62 
 
 
398 aa  101  2e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1139  ABC transporter, permease protein  36.52 
 
 
386 aa  102  2e-20  Burkholderia mallei ATCC 23344  Bacteria  hitchhiker  0.00529998  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1579  amine ABC transporter, permease protein  36.52 
 
 
406 aa  102  2e-20  Burkholderia mallei SAVP1  Bacteria  normal  0.8067  n/a   
 
 
-
 
NC_008836  BMA10229_A0238  amine ABC transporter, permease protein  36.52 
 
 
406 aa  102  2e-20  Burkholderia mallei NCTC 10229  Bacteria  normal  0.411768  n/a   
 
 
-
 
NC_007434  BURPS1710b_2133  ABC transporter, permease protein  36.8 
 
 
807 aa  100  6e-20  Burkholderia pseudomallei 1710b  Bacteria  normal  0.304775  n/a   
 
 
-
 
NC_010001  Cphy_0119  substrate-binding region of ABC-type glycine betaine transport system  32.42 
 
 
523 aa  99.4  9e-20  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000124345  n/a   
 
 
-
 
NC_008391  Bamb_4536  binding-protein-dependent transport systems inner membrane component  36.75 
 
 
392 aa  99  1e-19  Burkholderia ambifaria AMMD  Bacteria  normal  0.889052  normal 
 
 
-
 
NC_009972  Haur_0352  binding-protein-dependent transport systems inner membrane component  32.24 
 
 
212 aa  98.2  2e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00133912  n/a   
 
 
-
 
NC_009487  SaurJH9_2474  binding-protein-dependent transport systems inner membrane component  29.47 
 
 
211 aa  98.6  2e-19  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.13842  n/a   
 
 
-
 
NC_009632  SaurJH1_2522  binding-protein-dependent transport systems inner membrane component  29.47 
 
 
211 aa  98.6  2e-19  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.241712  n/a   
 
 
-
 
NC_002976  SERP2030  amino acid ABC transporter, permease protein  30.26 
 
 
211 aa  97.8  3e-19  Staphylococcus epidermidis RP62A  Bacteria  normal  0.207242  n/a   
 
 
-
 
NC_008148  Rxyl_0578  binding-protein-dependent transport systems inner membrane component  36.93 
 
 
235 aa  97.1  5e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0139749  n/a   
 
 
-
 
NC_008148  Rxyl_0984  binding-protein-dependent transport systems inner membrane component  36.93 
 
 
236 aa  97.1  5e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.660466  n/a   
 
 
-
 
NC_008261  CPF_0538  glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein  40.65 
 
 
517 aa  97.1  5e-19  Clostridium perfringens ATCC 13124  Bacteria  normal  0.863672  n/a   
 
 
-
 
NC_008262  CPR_0522  glycine betaine/carnitine/choline ABC transporter, permease/substrate-binding protein  40.65 
 
 
517 aa  97.1  5e-19  Clostridium perfringens SM101  Bacteria  normal  0.271995  n/a   
 
 
-
 
NC_009727  CBUD_1923  glycine betaine transport system permease protein  35 
 
 
526 aa  95.9  1e-18  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001529  probable inner-membrane permease  31.82 
 
 
199 aa  95.1  2e-18  Vibrio sp. Ex25  Bacteria  normal  0.90895  n/a   
 
 
-
 
NC_007643  Rru_A2384  binding-protein dependent transport system inner membrane protein  38.63 
 
 
392 aa  94  4e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.532854  n/a   
 
 
-
 
NC_010117  COXBURSA331_A0267  quaternary amine ABC transporter periplasmic substrate-binding protein  35 
 
 
526 aa  94  4e-18  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_5205  Substrate-binding region of ABC-type glycine betaine transport system  37.31 
 
 
537 aa  94  4e-18  Haliangium ochraceum DSM 14365  Bacteria  normal  0.057164  normal 
 
 
-
 
NC_007948  Bpro_1156  binding-protein-dependent transport systems inner membrane component  34.34 
 
 
207 aa  93.6  5e-18  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_1354  binding-protein-dependent transport systems inner membrane component  38.42 
 
 
204 aa  92.4  1e-17  Methanosphaerula palustris E1-9c  Archaea  normal  0.459118  normal  0.684309 
 
 
-
 
NC_013517  Sterm_1515  Substrate-binding region of ABC-type glycine betaine transport system  33.68 
 
 
526 aa  91.7  2e-17  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0692577  n/a   
 
 
-
 
NC_010003  Pmob_1125  binding-protein-dependent transport systems inner membrane component  30.81 
 
 
218 aa  92  2e-17  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1686  binding-protein dependent transport system inner membrane protein  32.83 
 
 
207 aa  92  2e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.038351  normal  0.407571 
 
 
-
 
NC_012850  Rleg_0150  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
388 aa  91.3  3e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_3333  Substrate-binding region of ABC-type glycine betaine transport system  37.88 
 
 
524 aa  90.5  5e-17  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000937167  n/a   
 
 
-
 
NC_011369  Rleg2_0144  binding-protein-dependent transport systems inner membrane component  36.32 
 
 
388 aa  90.1  6e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0628663 
 
 
-
 
NC_011891  A2cp1_3373  Substrate-binding region of ABC-type glycine betaine transport system  40.96 
 
 
489 aa  89.7  8e-17  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1814  binding-protein-dependent transport systems inner membrane component  35.75 
 
 
213 aa  89.4  1e-16  Roseiflexus sp. RS-1  Bacteria  normal  0.518824  normal  0.0107204 
 
 
-
 
NC_009767  Rcas_2531  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
213 aa  89  1e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.41546  hitchhiker  0.00151664 
 
 
-
 
NC_008025  Dgeo_0173  binding-protein-dependent transport systems inner membrane component  36.57 
 
 
397 aa  88.6  1e-16  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.348533 
 
 
-
 
NC_009621  Smed_5106  binding-protein-dependent transport systems inner membrane component  30.81 
 
 
220 aa  88.6  2e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.485727  normal  0.10095 
 
 
-
 
NC_014212  Mesil_0908  binding-protein-dependent transport systems inner membrane component  43.8 
 
 
434 aa  88.6  2e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0426507 
 
 
-
 
NC_013411  GYMC61_1174  binding-protein-dependent transport systems inner membrane component  32.18 
 
 
209 aa  87.4  4e-16  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009485  BBta_6070  putative glycine betaine/carnitine/choline ABC transporter (permease and substrate binding protein)  39.5 
 
 
515 aa  87  5e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0801  binding-protein-dependent transport systems inner membrane component  35.41 
 
 
216 aa  86.7  6e-16  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.435209 
 
 
-
 
NC_007963  Csal_2353  binding-protein-dependent transport systems inner membrane component  29.95 
 
 
220 aa  86.7  7e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0084  Substrate-binding region of ABC-type glycine betaine transport system  31.94 
 
 
528 aa  86.7  7e-16  Eggerthella lenta DSM 2243  Bacteria  normal  0.689632  normal 
 
 
-
 
NC_009487  SaurJH9_0746  substrate-binding region of ABC-type glycine betaine transport system  31.63 
 
 
504 aa  86.3  9e-16  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0763  substrate-binding region of ABC-type glycine betaine transport system  31.63 
 
 
504 aa  86.3  9e-16  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.458546  n/a   
 
 
-
 
NC_013223  Dret_0770  binding-protein-dependent transport systems inner membrane component  29 
 
 
222 aa  85.9  0.000000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_0296  binding-protein-dependent transport systems inner membrane component  30.62 
 
 
211 aa  85.9  0.000000000000001  Geobacillus sp. WCH70  Bacteria  normal  0.4946  n/a   
 
 
-
 
NC_007964  Nham_2719  substrate-binding region of ABC-type glycine betaine transport system  39.42 
 
 
519 aa  85.9  0.000000000000001  Nitrobacter hamburgensis X14  Bacteria  normal  0.222356  n/a   
 
 
-
 
NC_008786  Veis_2914  binding-protein-dependent transport systems inner membrane component  30.73 
 
 
220 aa  85.1  0.000000000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.208767 
 
 
-
 
NC_007958  RPD_2104  substrate-binding region of ABC-type glycine betaine transport system  39.81 
 
 
519 aa  84.7  0.000000000000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.882961  normal  0.496916 
 
 
-
 
NC_008254  Meso_2979  binding-protein-dependent transport systems inner membrane component  35.54 
 
 
210 aa  85.5  0.000000000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2494  binding-protein dependent transport system inner membrane protein  33.33 
 
 
216 aa  84.3  0.000000000000003  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18430  binding-protein-dependent transport systems inner membrane component  31.21 
 
 
214 aa  84.7  0.000000000000003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000175392  n/a   
 
 
-
 
NC_011145  AnaeK_3299  Substrate-binding region of ABC-type glycine betaine transport system  40.43 
 
 
490 aa  84.7  0.000000000000003  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1621  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
261 aa  84.7  0.000000000000003  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_1127  binding-protein-dependent transport systems inner membrane component  32 
 
 
216 aa  83.6  0.000000000000005  Petrotoga mobilis SJ95  Bacteria  normal  0.721959  n/a   
 
 
-
 
NC_007778  RPB_3337  substrate-binding region of ABC-type glycine betaine transport system  37.62 
 
 
519 aa  83.2  0.000000000000007  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.917916  normal  0.224892 
 
 
-
 
NC_002976  SERP0386  ABC transporter, permease protein  31.25 
 
 
504 aa  83.2  0.000000000000008  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1451  binding-protein dependent transport system inner membrane protein  35.78 
 
 
493 aa  82.4  0.00000000000001  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
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