More than 300 homologs were found in PanDaTox collection
for query gene Lreu_0086 on replicon NC_009513
Organism: Lactobacillus reuteri DSM 20016



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009513  Lreu_0086  carbamoyl phosphate synthase small subunit  100 
 
 
362 aa  754    Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000481793  n/a   
 
 
-
 
NC_008530  LGAS_1088  carbamoyl phosphate synthase small subunit  69.34 
 
 
362 aa  542  1e-153  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_3714  carbamoyl phosphate synthase small subunit  56.3 
 
 
365 aa  434  1e-121  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.971369  n/a   
 
 
-
 
NC_011725  BCB4264_A3985  carbamoyl phosphate synthase small subunit  55.74 
 
 
365 aa  429  1e-119  Bacillus cereus B4264  Bacteria  normal  0.289727  n/a   
 
 
-
 
NC_008527  LACR_1709  carbamoyl phosphate synthase small subunit  54.49 
 
 
357 aa  429  1e-119  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3932  carbamoyl phosphate synthase small subunit  55.46 
 
 
365 aa  427  1e-118  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3738  carbamoyl phosphate synthase small subunit  55.18 
 
 
365 aa  427  1e-118  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3629  carbamoyl phosphate synthase small subunit  55.18 
 
 
365 aa  427  1e-118  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3646  carbamoyl phosphate synthase small subunit  55.18 
 
 
365 aa  426  1e-118  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3901  carbamoyl phosphate synthase small subunit  55.18 
 
 
365 aa  427  1e-118  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000355158 
 
 
-
 
NC_007530  GBAA_4026  carbamoyl phosphate synthase small subunit  55.18 
 
 
365 aa  427  1e-118  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0667428  n/a   
 
 
-
 
NC_011658  BCAH187_A3936  carbamoyl phosphate synthase small subunit  55.46 
 
 
365 aa  427  1e-118  Bacillus cereus AH187  Bacteria  normal  0.0146429  n/a   
 
 
-
 
NC_011772  BCG9842_B1256  carbamoyl phosphate synthase small subunit  55.18 
 
 
365 aa  426  1e-118  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_004116  SAG1043  carbamoyl phosphate synthase small subunit  55.24 
 
 
358 aa  422  1e-117  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2536  carbamoyl phosphate synthase small subunit  55.18 
 
 
373 aa  424  1e-117  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0261621  n/a   
 
 
-
 
NC_008531  LEUM_1208  carbamoyl-phosphate synthase small subunit  54.34 
 
 
361 aa  422  1e-117  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.0000951644  n/a   
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  53.69 
 
 
364 aa  413  1e-114  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_1046  carbamoyl phosphate synthase small subunit  52.38 
 
 
364 aa  411  1e-114  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008532  STER_0558  carbamoyl phosphate synthase small subunit  53.26 
 
 
362 aa  413  1e-114  Streptococcus thermophilus LMD-9  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0768  carbamoyl phosphate synthase small subunit  51.69 
 
 
366 aa  406  1.0000000000000001e-112  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_0260  carbamoyl-phosphate synthase small subunit  51.69 
 
 
363 aa  407  1.0000000000000001e-112  Oenococcus oeni PSU-1  Bacteria  normal  0.734432  n/a   
 
 
-
 
NC_009487  SaurJH9_1261  carbamoyl phosphate synthase small subunit  51.12 
 
 
366 aa  397  1e-109  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1286  carbamoyl phosphate synthase small subunit  51.12 
 
 
366 aa  397  1e-109  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.510283  n/a   
 
 
-
 
NC_014150  Bmur_2483  carbamoyl-phosphate synthase, small subunit  49.86 
 
 
359 aa  393  1e-108  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000863462  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  50.71 
 
 
359 aa  382  1e-105  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  48.74 
 
 
359 aa  381  1e-104  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  50.57 
 
 
358 aa  375  1e-103  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal 
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  47.63 
 
 
361 aa  365  1e-100  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  48.01 
 
 
388 aa  363  2e-99  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.924948 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  49.33 
 
 
379 aa  362  5.0000000000000005e-99  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  48.02 
 
 
359 aa  360  1e-98  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  47.88 
 
 
357 aa  357  2.9999999999999997e-97  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  47.06 
 
 
385 aa  357  2.9999999999999997e-97  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  48 
 
 
384 aa  355  5e-97  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.162276 
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  47.33 
 
 
389 aa  353  2e-96  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  46.52 
 
 
368 aa  353  4e-96  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0661  carbamoyl phosphate synthase small subunit  50.84 
 
 
356 aa  348  9e-95  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  46.67 
 
 
376 aa  346  3e-94  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_010655  Amuc_1250  carbamoyl-phosphate synthase, small subunit  45.53 
 
 
372 aa  345  5e-94  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  47.16 
 
 
349 aa  345  5e-94  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  44.47 
 
 
373 aa  345  8.999999999999999e-94  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  47.16 
 
 
349 aa  345  1e-93  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  47.47 
 
 
380 aa  344  2e-93  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  47.47 
 
 
380 aa  344  2e-93  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1307  carbamoyl-phosphate synthase, small subunit  44.76 
 
 
368 aa  342  4e-93  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_2459  carbamoyl phosphate synthase small subunit  46.98 
 
 
369 aa  338  9e-92  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.420642  n/a   
 
 
-
 
NC_007514  Cag_0107  carbamoyl phosphate synthase small subunit  46.67 
 
 
367 aa  337  1.9999999999999998e-91  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  46.05 
 
 
351 aa  337  1.9999999999999998e-91  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_2113  carbamoyl phosphate synthase small subunit  46.98 
 
 
371 aa  337  1.9999999999999998e-91  Prosthecochloris aestuarii DSM 271  Bacteria  unclonable  0.000000000982338  normal  0.988223 
 
 
-
 
NC_011060  Ppha_0218  carbamoyl phosphate synthase small subunit  48.06 
 
 
367 aa  337  1.9999999999999998e-91  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  45.01 
 
 
383 aa  335  1e-90  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  46.3 
 
 
391 aa  335  1e-90  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.618886 
 
 
-
 
NC_011898  Ccel_0615  carbamoyl-phosphate synthase, small subunit  44.32 
 
 
360 aa  332  5e-90  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_2349  carbamoyl phosphate synthase small subunit  46.94 
 
 
366 aa  332  8e-90  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  46.01 
 
 
369 aa  331  1e-89  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  44.66 
 
 
356 aa  330  2e-89  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_1307  carbamoyl phosphate synthase small subunit  43.2 
 
 
398 aa  329  4e-89  Synechococcus sp. CC9902  Bacteria  normal  0.786161  n/a   
 
 
-
 
NC_009486  Tpet_0362  carbamoyl phosphate synthase small subunit  43.01 
 
 
392 aa  328  1.0000000000000001e-88  Thermotoga petrophila RKU-1  Bacteria  normal  0.0108123  n/a   
 
 
-
 
NC_010483  TRQ2_0379  carbamoyl phosphate synthase small subunit  43.01 
 
 
392 aa  328  1.0000000000000001e-88  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2191  carbamoyl phosphate synthase small subunit  44.99 
 
 
372 aa  327  2.0000000000000001e-88  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.352304 
 
 
-
 
NC_008554  Sfum_0009  carbamoyl phosphate synthase small subunit  43.99 
 
 
391 aa  326  4.0000000000000003e-88  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.35972  normal 
 
 
-
 
NC_011145  AnaeK_2240  carbamoyl phosphate synthase small subunit  44.32 
 
 
373 aa  326  5e-88  Anaeromyxobacter sp. K  Bacteria  normal  0.513182  n/a   
 
 
-
 
NC_007516  Syncc9605_1152  carbamoyl phosphate synthase small subunit  42.78 
 
 
386 aa  325  8.000000000000001e-88  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1620  carbamoyl phosphate synthase small subunit  44.09 
 
 
373 aa  325  8.000000000000001e-88  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.394714  n/a   
 
 
-
 
NC_009455  DehaBAV1_1011  carbamoyl phosphate synthase small subunit  45.15 
 
 
364 aa  325  8.000000000000001e-88  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  45.5 
 
 
394 aa  324  2e-87  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.745912 
 
 
-
 
NC_011891  A2cp1_2328  carbamoyl phosphate synthase small subunit  44.32 
 
 
373 aa  323  3e-87  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  42.78 
 
 
364 aa  322  6e-87  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  45.14 
 
 
377 aa  321  9.999999999999999e-87  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007335  PMN2A_0259  carbamoyl phosphate synthase small subunit  43.47 
 
 
384 aa  320  3e-86  Prochlorococcus marinus str. NATL2A  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2356  carbamoyl-phosphate synthase, small subunit  44.66 
 
 
388 aa  319  3.9999999999999996e-86  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008819  NATL1_09281  carbamoyl phosphate synthase small subunit  43.47 
 
 
384 aa  319  3.9999999999999996e-86  Prochlorococcus marinus str. NATL1A  Bacteria  normal  0.87193  normal  0.0301636 
 
 
-
 
NC_010803  Clim_2299  carbamoyl phosphate synthase small subunit  43.8 
 
 
369 aa  319  3.9999999999999996e-86  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.0000401664  n/a   
 
 
-
 
NC_008531  LEUM_1371  carbamoyl-phosphate synthase small subunit  43.58 
 
 
359 aa  318  1e-85  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.850128  n/a   
 
 
-
 
NC_013037  Dfer_4372  carbamoyl phosphate synthase small subunit  44.32 
 
 
368 aa  316  4e-85  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_3134  carbamoyl phosphate synthase small subunit  45.04 
 
 
365 aa  315  6e-85  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00309954  normal  0.624164 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  43.2 
 
 
386 aa  314  9.999999999999999e-85  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal 
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  43.2 
 
 
374 aa  313  1.9999999999999998e-84  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  44.72 
 
 
379 aa  314  1.9999999999999998e-84  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1322  carbamoyl-phosphate synthase, small subunit  44.3 
 
 
414 aa  313  1.9999999999999998e-84  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.125881 
 
 
-
 
NC_013946  Mrub_2703  carbamoyl-phosphate synthase small subunit  43.44 
 
 
388 aa  314  1.9999999999999998e-84  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.614253 
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  42.74 
 
 
386 aa  313  1.9999999999999998e-84  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal 
 
 
-
 
NC_009635  Maeo_0466  carbamoyl phosphate synthase small subunit  43.7 
 
 
357 aa  313  2.9999999999999996e-84  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_013162  Coch_0275  carbamoyl phosphate synthase small subunit  45.92 
 
 
366 aa  313  2.9999999999999996e-84  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.000180913  n/a   
 
 
-
 
NC_002936  DET1201  carbamoyl phosphate synthase small subunit  43.68 
 
 
364 aa  313  3.9999999999999997e-84  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_008820  P9303_15771  carbamoyl phosphate synthase small subunit  42.32 
 
 
379 aa  313  3.9999999999999997e-84  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_013525  Tter_1371  carbamoyl-phosphate synthase, small subunit  42.15 
 
 
368 aa  312  4.999999999999999e-84  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013552  DhcVS_984  carbamoyl-phosphate synthase, small subunit  43.96 
 
 
364 aa  312  5.999999999999999e-84  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1915  carbamoyl-phosphate synthase, small subunit  43.12 
 
 
390 aa  311  7.999999999999999e-84  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2370  carbamoyl phosphate synthase small subunit  41.29 
 
 
376 aa  311  1e-83  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.82733 
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  43.48 
 
 
379 aa  310  2e-83  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1968  carbamoyl phosphate synthase small subunit  45.8 
 
 
379 aa  310  2e-83  Vibrio cholerae O395  Bacteria  normal  0.837999  n/a   
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  44.17 
 
 
379 aa  311  2e-83  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_009513  Lreu_0930  carbamoyl phosphate synthase small subunit  43.75 
 
 
361 aa  310  2e-83  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4017  carbamoyl-phosphate synthase, small subunit  45.04 
 
 
367 aa  310  2e-83  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1811  carbamoyl phosphate synthase small subunit  42.97 
 
 
393 aa  308  6.999999999999999e-83  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.0542874 
 
 
-
 
NC_013165  Shel_13220  carbamoyl-phosphate synthase small subunit  40.49 
 
 
467 aa  308  6.999999999999999e-83  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.363669  normal  0.801105 
 
 
-
 
NC_008709  Ping_0896  carbamoyl-phosphate synthase, small subunit  44.77 
 
 
378 aa  308  9e-83  Psychromonas ingrahamii 37  Bacteria  normal  0.348294  normal  0.560722 
 
 
-
 
NC_007298  Daro_0938  carbamoyl-phosphate synthase small subunit  44.75 
 
 
385 aa  307  1.0000000000000001e-82  Dechloromonas aromatica RCB  Bacteria  normal  0.742428  normal 
 
 
-
 
NC_009976  P9211_06931  carbamoyl phosphate synthase small subunit  42.74 
 
 
380 aa  307  1.0000000000000001e-82  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0298336  normal  0.187512 
 
 
-
 
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