8 homologs were found in PanDaTox collection
for query gene Lferr_2553 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_2553  hypothetical protein  100 
 
 
192 aa  392  1e-108  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  decreased coverage  5.59785e-09  normal  0.790729 
 
 
-
 
NC_011761  AFE_2942  hypothetical protein  100 
 
 
192 aa  392  1e-108  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  unclonable  0.000655601  n/a   
 
 
-
 
NC_011206  Lferr_2697  hypothetical protein  38.38 
 
 
200 aa  137  8e-32  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.466819  hitchhiker  1.99672e-06 
 
 
-
 
NC_011761  AFE_3099  hypothetical protein  38.38 
 
 
200 aa  137  8e-32  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011126  HY04AAS1_0526  hypothetical protein  35.2 
 
 
175 aa  89  4e-17  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  0.010371  n/a   
 
 
-
 
NC_011206  Lferr_2356  hypothetical protein  25.91 
 
 
202 aa  65.5  5e-10  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.829552  hitchhiker  9.77363e-10 
 
 
-
 
NC_011761  AFE_2734  hypothetical protein  25.91 
 
 
202 aa  65.5  5e-10  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.140719  n/a   
 
 
-
 
NC_003910  CPS_3444  cytochrome b561 family protein  23.66 
 
 
185 aa  42.7  0.003  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
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