10 homologs were found in PanDaTox collection
for query gene Lferr_2179 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_1126    100 
 
 
3378 bp  4058  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011206  Lferr_2179    100 
 
 
2775 bp  5501  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.787998  decreased coverage  1.27376e-09 
 
 
-
 
NC_011206  Lferr_2394    100 
 
 
2937 bp  4056  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_2551  iron-sulfur cluster-binding protein  100 
 
 
720 bp  793  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.802978  n/a   
 
 
-
 
NC_011901  Tgr7_2212  heterodisulfide reductase subunit C  91.58 
 
 
717 bp  125  7e-26  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.0191178  n/a   
 
 
-
 
NC_011206  Lferr_2136  transposase  100 
 
 
969 bp  123  3e-25  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0169548 
 
 
-
 
NC_011206  Lferr_2799  hypothetical protein  100 
 
 
810 bp  121  1e-24  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0636  iron-sulfur cluster-binding protein  87.76 
 
 
717 bp  99.6  4e-18  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.126769 
 
 
-
 
NC_011206  Lferr_2582  glycosyl transferase group 1  100 
 
 
3999 bp  93.7  3e-16  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.35538  normal 
 
 
-
 
NC_011206  Lferr_0307  hypothetical protein  100 
 
 
843 bp  58  1e-05  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  decreased coverage  2.84732e-05  decreased coverage  6.57786e-06 
 
 
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